BLASTX nr result

ID: Dioscorea21_contig00007829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007829
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA82748.1| mitochondrial ribosomal protein S14 [Oryza sativ...   252   2e-65
gb|EAZ05419.1| hypothetical protein OsI_27631 [Oryza sativa Indi...   252   2e-65
ref|NP_001060876.1| Os08g0120000 [Oryza sativa Japonica Group] g...   252   2e-65
gb|ACN33958.1| unknown [Zea mays] gi|413941748|gb|AFW74397.1| hy...   249   2e-64
ref|NP_001136531.1| uncharacterized protein LOC100216648 [Zea ma...   249   2e-64

>dbj|BAA82748.1| mitochondrial ribosomal protein S14 [Oryza sativa Japonica Group]
           gi|5688950|dbj|BAA82751.1| mitochondrial ribosomal
           portein S14 [Oryza sativa Japonica Group]
           gi|42407916|dbj|BAD09056.1| mitochondrial ribosomal
           protein S14 [Oryza sativa Japonica Group]
           gi|215734910|dbj|BAG95632.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765431|dbj|BAG87128.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 350

 Score =  252 bits (644), Expect = 2e-65
 Identities = 121/159 (76%), Positives = 136/159 (85%), Gaps = 5/159 (3%)
 Frame = +2

Query: 32  SLPWRLVPSQLQSSQAEPPAKPKR----TKTFSIYRWNPDNPS-KPYLHNYEIDLNDCGP 196
           +L  RLV S+  SS   PP  P +    TKTFSIYRW+PD+PS KP+L +Y++DL+DCGP
Sbjct: 20  ALSSRLVASKPHSSSPAPPPPPSKAGANTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGP 79

Query: 197 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKIQASGGASTITPLP 376
           MVLD L+KIKNE DPSLTFRRSCREGICGSCAMNIDGDNGLACLTKI ++  ASTI+PLP
Sbjct: 80  MVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTISPLP 139

Query: 377 HMFVVKDLVVDMTNFYNQYKSVEPWLKRKDPPPQPGKEI 493
           HMFV+KDLVVDMTNFYNQYKSVEPWLKRKD PPQPGKEI
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEI 178


>gb|EAZ05419.1| hypothetical protein OsI_27631 [Oryza sativa Indica Group]
           gi|125602012|gb|EAZ41337.1| hypothetical protein
           OsJ_25852 [Oryza sativa Japonica Group]
          Length = 406

 Score =  252 bits (644), Expect = 2e-65
 Identities = 121/159 (76%), Positives = 136/159 (85%), Gaps = 5/159 (3%)
 Frame = +2

Query: 32  SLPWRLVPSQLQSSQAEPPAKPKR----TKTFSIYRWNPDNPS-KPYLHNYEIDLNDCGP 196
           +L  RLV S+  SS   PP  P +    TKTFSIYRW+PD+PS KP+L +Y++DL+DCGP
Sbjct: 20  ALSSRLVASKPHSSSPAPPPPPSKAGANTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGP 79

Query: 197 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKIQASGGASTITPLP 376
           MVLD L+KIKNE DPSLTFRRSCREGICGSCAMNIDGDNGLACLTKI ++  ASTI+PLP
Sbjct: 80  MVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTISPLP 139

Query: 377 HMFVVKDLVVDMTNFYNQYKSVEPWLKRKDPPPQPGKEI 493
           HMFV+KDLVVDMTNFYNQYKSVEPWLKRKD PPQPGKEI
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEI 178


>ref|NP_001060876.1| Os08g0120000 [Oryza sativa Japonica Group]
           gi|5688947|dbj|BAA82749.1| succinate dehydrogenase
           iron-protein subunit (SDHB) [Oryza sativa Japonica
           Group] gi|5688949|dbj|BAA82750.1| succinate
           dehydrogenase iron-protein subunit [Oryza sativa
           Japonica Group] gi|42407915|dbj|BAD09055.1| succinate
           dehydrogenase iron-protein subunit (SDHB) [Oryza sativa
           Japonica Group] gi|113622845|dbj|BAF22790.1|
           Os08g0120000 [Oryza sativa Japonica Group]
           gi|215737455|dbj|BAG96585.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737456|dbj|BAG96586.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765447|dbj|BAG87144.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 281

 Score =  252 bits (644), Expect = 2e-65
 Identities = 121/159 (76%), Positives = 136/159 (85%), Gaps = 5/159 (3%)
 Frame = +2

Query: 32  SLPWRLVPSQLQSSQAEPPAKPKR----TKTFSIYRWNPDNPS-KPYLHNYEIDLNDCGP 196
           +L  RLV S+  SS   PP  P +    TKTFSIYRW+PD+PS KP+L +Y++DL+DCGP
Sbjct: 20  ALSSRLVASKPHSSSPAPPPPPSKAGANTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGP 79

Query: 197 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKIQASGGASTITPLP 376
           MVLD L+KIKNE DPSLTFRRSCREGICGSCAMNIDGDNGLACLTKI ++  ASTI+PLP
Sbjct: 80  MVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTISPLP 139

Query: 377 HMFVVKDLVVDMTNFYNQYKSVEPWLKRKDPPPQPGKEI 493
           HMFV+KDLVVDMTNFYNQYKSVEPWLKRKD PPQPGKEI
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEI 178


>gb|ACN33958.1| unknown [Zea mays] gi|413941748|gb|AFW74397.1| hypothetical protein
           ZEAMMB73_659942 [Zea mays]
          Length = 350

 Score =  249 bits (635), Expect = 2e-64
 Identities = 120/159 (75%), Positives = 138/159 (86%), Gaps = 5/159 (3%)
 Frame = +2

Query: 32  SLPWRLVPSQLQSSQ-AEPPAKPK---RTKTFSIYRWNPDNPS-KPYLHNYEIDLNDCGP 196
           +L  RLV S+  SS   +PP + K    TKTFSIYRW+PD+PS KP+L +Y++DL+DCGP
Sbjct: 20  ALSSRLVASKPHSSSPTQPPPEAKGASSTKTFSIYRWDPDSPSTKPHLRDYQVDLSDCGP 79

Query: 197 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKIQASGGASTITPLP 376
           MVLDAL+KIKNE DPSLTFRRSCREGICGSCAMNIDGDNGLACLTKI ++  AST++PLP
Sbjct: 80  MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTVSPLP 139

Query: 377 HMFVVKDLVVDMTNFYNQYKSVEPWLKRKDPPPQPGKEI 493
           HMFV+KDLVVDMTNFYNQYKSVEPWLKRKDPPPQ GKE+
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSVEPWLKRKDPPPQLGKEV 178


>ref|NP_001136531.1| uncharacterized protein LOC100216648 [Zea mays]
           gi|194696050|gb|ACF82109.1| unknown [Zea mays]
           gi|413941747|gb|AFW74396.1| (csu474(rpS14)), mRNA [Zea
           mays]
          Length = 281

 Score =  249 bits (635), Expect = 2e-64
 Identities = 120/159 (75%), Positives = 138/159 (86%), Gaps = 5/159 (3%)
 Frame = +2

Query: 32  SLPWRLVPSQLQSSQ-AEPPAKPK---RTKTFSIYRWNPDNPS-KPYLHNYEIDLNDCGP 196
           +L  RLV S+  SS   +PP + K    TKTFSIYRW+PD+PS KP+L +Y++DL+DCGP
Sbjct: 20  ALSSRLVASKPHSSSPTQPPPEAKGASSTKTFSIYRWDPDSPSTKPHLRDYQVDLSDCGP 79

Query: 197 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKIQASGGASTITPLP 376
           MVLDAL+KIKNE DPSLTFRRSCREGICGSCAMNIDGDNGLACLTKI ++  AST++PLP
Sbjct: 80  MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTVSPLP 139

Query: 377 HMFVVKDLVVDMTNFYNQYKSVEPWLKRKDPPPQPGKEI 493
           HMFV+KDLVVDMTNFYNQYKSVEPWLKRKDPPPQ GKE+
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSVEPWLKRKDPPPQLGKEV 178


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