BLASTX nr result

ID: Dioscorea21_contig00007777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007777
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1...    64   2e-08
emb|CBI23031.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycin...    59   3e-07
ref|NP_001048742.1| Os03g0114200 [Oryza sativa Japonica Group] g...    55   8e-06

>ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1AD-like [Vitis
           vinifera]
          Length = 192

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = +2

Query: 110 MKAGRKNLKKAVEEDGLALQEGQSIMQVVSLRGSNLIEV 226
           MK GRKNLK+A EE  L LQEGQSIMQVVSLRG+NLIEV
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEV 39


>emb|CBI23031.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = +2

Query: 110 MKAGRKNLKKAVEEDGLALQEGQSIMQVVSLRGSNLIEV 226
           MK GRKNLK+A EE  L LQEGQSIMQVVSLRG+NLIEV
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEV 39


>ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycine max]
           gi|255629065|gb|ACU14877.1| unknown [Glycine max]
          Length = 171

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +2

Query: 107 AMKAGRKNLKKAVEEDGLALQEGQSIMQVVSLRGSNLIEV 226
           AM+ GRKNLK+A EE  + LQ+GQ IMQVVSLRG+N+IEV
Sbjct: 2   AMRGGRKNLKRATEEKHITLQDGQGIMQVVSLRGANIIEV 41


>ref|NP_001048742.1| Os03g0114200 [Oryza sativa Japonica Group]
           gi|27476090|gb|AAO17021.1| Hypothetical protein [Oryza
           sativa Japonica Group] gi|108705834|gb|ABF93629.1|
           LOC496359 protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113547213|dbj|BAF10656.1|
           Os03g0114200 [Oryza sativa Japonica Group]
           gi|125542126|gb|EAY88265.1| hypothetical protein
           OsI_09718 [Oryza sativa Indica Group]
           gi|215765975|dbj|BAG98203.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222624072|gb|EEE58204.1| hypothetical protein
           OsJ_09157 [Oryza sativa Japonica Group]
          Length = 167

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +2

Query: 110 MKAGRKNLKKAVEEDGLALQEGQSIMQVVSLRGSNLIEV 226
           MKAGRKNL++A  E  + L EG+SIMQV++LRGSN+IEV
Sbjct: 1   MKAGRKNLRRACSEGAVTLGEGESIMQVLALRGSNVIEV 39


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