BLASTX nr result

ID: Dioscorea21_contig00007771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007771
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT08690.1| small nuclear ribonucleoprotein polypeptide G [Hy...   101   1e-19
ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [S...   100   3e-19
tpg|DAA45758.1| TPA: small nuclear ribonucleoprotein G [Zea mays]      98   1e-18
gb|ACG41991.1| small nuclear ribonucleoprotein G [Zea mays]            98   1e-18
ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]...    98   1e-18

>gb|AAT08690.1| small nuclear ribonucleoprotein polypeptide G [Hyacinthus
           orientalis]
          Length = 96

 Score =  101 bits (251), Expect = 1e-19
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +1

Query: 1   VVGTLRGFDQFMNLVIDQTVEVNGNEKNDIGMVVIRGNSVVMIEALEPVARTQ 159
           VVGTLRGFDQFMNLVID T+EVNGN+KNDIGMVVIRGNSVVMIEALEPVARTQ
Sbjct: 44  VVGTLRGFDQFMNLVIDNTMEVNGNDKNDIGMVVIRGNSVVMIEALEPVARTQ 96


>ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
           gi|241926546|gb|EER99690.1| hypothetical protein
           SORBIDRAFT_02g039000 [Sorghum bicolor]
          Length = 80

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +1

Query: 1   VVGTLRGFDQFMNLVIDQTVEVNGNEKNDIGMVVIRGNSVVMIEALEPVARTQ 159
           V+GTLRGFDQFMNLVID TVEVNGNEKNDIGMVVIRGNSVVMIEALEPVA+ Q
Sbjct: 28  VIGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVMIEALEPVAKAQ 80


>tpg|DAA45758.1| TPA: small nuclear ribonucleoprotein G [Zea mays]
          Length = 67

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +1

Query: 1   VVGTLRGFDQFMNLVIDQTVEVNGNEKNDIGMVVIRGNSVVMIEALEPVARTQ 159
           V+GTLRGFDQFMNLV+D TVEVNGN+K DIGMVVIRGNSVVMIEALEPVAR+Q
Sbjct: 15  VIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEALEPVARSQ 67


>gb|ACG41991.1| small nuclear ribonucleoprotein G [Zea mays]
          Length = 73

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +1

Query: 1   VVGTLRGFDQFMNLVIDQTVEVNGNEKNDIGMVVIRGNSVVMIEALEPVARTQ 159
           V+GTLRGFDQFMNLV+D TVEVNGN+K DIGMVVIRGNSVVMIEALEPVAR+Q
Sbjct: 21  VIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEALEPVARSQ 73


>ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]
           gi|194698570|gb|ACF83369.1| unknown [Zea mays]
           gi|195609740|gb|ACG26700.1| small nuclear
           ribonucleoprotein G [Zea mays]
           gi|195621638|gb|ACG32649.1| small nuclear
           ribonucleoprotein G [Zea mays]
           gi|195656303|gb|ACG47619.1| small nuclear
           ribonucleoprotein G [Zea mays]
           gi|414867200|tpg|DAA45757.1| TPA: Small nuclear
           ribonucleoprotein G [Zea mays]
          Length = 80

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +1

Query: 1   VVGTLRGFDQFMNLVIDQTVEVNGNEKNDIGMVVIRGNSVVMIEALEPVARTQ 159
           V+GTLRGFDQFMNLV+D TVEVNGN+K DIGMVVIRGNSVVMIEALEPVAR+Q
Sbjct: 28  VIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEALEPVARSQ 80


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