BLASTX nr result

ID: Dioscorea21_contig00007752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007752
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521569.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   126   2e-27
dbj|BAF00231.1| hypothetical protein [Arabidopsis thaliana]           126   2e-27
ref|NP_182291.1| NADH dehydrogenase (ubiquinone) Fe-S protein 5 ...   126   2e-27
gb|AAP34361.1| fiber protein Fb14 [Gossypium barbadense] gi|6627...   125   3e-27
ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   125   4e-27

>ref|XP_003521569.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B
           isoform 1 [Glycine max] gi|356505584|ref|XP_003521570.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 5-B isoform 2 [Glycine max]
          Length = 82

 Score =  126 bits (316), Expect = 2e-27
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = -2

Query: 474 MASGWGISGNKGRCYDFWNDFSECMSRCREPKDCKLLREDYFECLHHSKEFQRRNRVY 301
           MASGWGI+GNKGRCYDFW DFSECMSRCREPKDC LLREDY ECLHHSKEFQRRNR+Y
Sbjct: 1   MASGWGITGNKGRCYDFWMDFSECMSRCREPKDCALLREDYLECLHHSKEFQRRNRIY 58


>dbj|BAF00231.1| hypothetical protein [Arabidopsis thaliana]
          Length = 91

 Score =  126 bits (316), Expect = 2e-27
 Identities = 53/59 (89%), Positives = 55/59 (93%)
 Frame = -2

Query: 477 EMASGWGISGNKGRCYDFWNDFSECMSRCREPKDCKLLREDYFECLHHSKEFQRRNRVY 301
           EMASGWGI+GNKGRCYDFW DFSECMS CREPKDC LLREDY ECLHHSKEFQRRNR+Y
Sbjct: 8   EMASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIY 66


>ref|NP_182291.1| NADH dehydrogenase (ubiquinone) Fe-S protein 5 [Arabidopsis
           thaliana] gi|75100571|sp|O82238.1|NDS5A_ARATH RecName:
           Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
           5-A gi|3738283|gb|AAC63625.1| unknown protein
           [Arabidopsis thaliana] gi|330255782|gb|AEC10876.1| NADH
           dehydrogenase (ubiquinone) Fe-S protein 5 [Arabidopsis
           thaliana]
          Length = 118

 Score =  126 bits (316), Expect = 2e-27
 Identities = 53/59 (89%), Positives = 55/59 (93%)
 Frame = -2

Query: 477 EMASGWGISGNKGRCYDFWNDFSECMSRCREPKDCKLLREDYFECLHHSKEFQRRNRVY 301
           EMASGWGI+GNKGRCYDFW DFSECMS CREPKDC LLREDY ECLHHSKEFQRRNR+Y
Sbjct: 35  EMASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIY 93


>gb|AAP34361.1| fiber protein Fb14 [Gossypium barbadense]
           gi|66271051|gb|AAY43803.1| Fb14 [Gossypium hirsutum]
          Length = 83

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/84 (70%), Positives = 61/84 (72%)
 Frame = -2

Query: 474 MASGWGISGNKGRCYDFWNDFSECMSRCREPKDCKLLREDYFECLHHSKEFQRRNRVYXX 295
           MASGWGI+GNKGRCYDFW DFSECMSRCREPKDC LLREDY ECLHHSKEFQRRNR+Y  
Sbjct: 1   MASGWGINGNKGRCYDFWVDFSECMSRCREPKDCGLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 294 XXXXXXXXXXXXXEGEGVAATSHH 223
                        EGE V    HH
Sbjct: 61  EQRKLRAAARKDKEGENVV---HH 81


>ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 401

 Score =  125 bits (314), Expect = 4e-27
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = -2

Query: 474 MASGWGISGNKGRCYDFWNDFSECMSRCREPKDCKLLREDYFECLHHSKEFQRRNRVY 301
           MASGWGI+GNKGRCYDFW DFSECMS CREPKDC LLREDYFECLHHSKEFQRRNR+Y
Sbjct: 1   MASGWGITGNKGRCYDFWIDFSECMSTCREPKDCVLLREDYFECLHHSKEFQRRNRIY 58


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