BLASTX nr result

ID: Dioscorea21_contig00007721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007721
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569376.1| PREDICTED: nucleoporin SEH1-like [Brachypodi...   491   e-136
ref|NP_001043597.1| Os01g0620100 [Oryza sativa Japonica Group] g...   477   e-132
dbj|BAK08348.1| predicted protein [Hordeum vulgare subsp. vulgare]    476   e-132
ref|NP_001150647.1| LOC100284280 [Zea mays] gi|195640836|gb|ACG3...   470   e-130
ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vini...   470   e-130

>ref|XP_003569376.1| PREDICTED: nucleoporin SEH1-like [Brachypodium distachyon]
          Length = 323

 Score =  491 bits (1263), Expect = e-136
 Identities = 226/319 (70%), Positives = 264/319 (82%)
 Frame = +2

Query: 2   RVVATLEKGAQCCGWSHGGRRLAAGYADGAVSVHDSADPSARYSARWIAHSCGVVNVVWV 181
           R VA L  GA CCGW+H GRRLAAG  DG+VSV+DS  PS   S++W AH C +VNVVW+
Sbjct: 4   RQVAQLGPGAACCGWNHCGRRLAAGAVDGSVSVYDS-QPSP--SSKWQAHECAIVNVVWL 60

Query: 182 PPEFGEAIACICADGTLSLWEEIGQDAQAVSWKLCKLFEGTGTQVLDVQFGVSLMTLKLV 361
           PPE+G+AIAC+CADGTLSLWEE+ +D Q  +W+ CK+FEG  + +L+VQFG+ L +LK+V
Sbjct: 61  PPEYGDAIACVCADGTLSLWEEVAEDDQLPTWRKCKVFEGGNSHILNVQFGLLLSSLKMV 120

Query: 362 AAYSDGYVKVYESLDPLELNKWQLQAEFQNVIDSVSRFGKPSCMSASIAWSPRRGESQQS 541
            AYSDG VKVYE LD LEL+KWQLQAEFQN+ D VSR GKP C+SASIAWSPRRGE QQ+
Sbjct: 121 TAYSDGQVKVYELLDSLELDKWQLQAEFQNITDPVSRNGKPECVSASIAWSPRRGEGQQA 180

Query: 542 SFVLGYNSDLSQFNSPKVWEFEEAHQRWVPVAELALPGDKGDRVHAVAWAPNIGRPYEVV 721
           SFV+G+NSD   FNS K+WEFEEAHQRW+P+ EL    DKGDRVHAVAWAPNIGRPYE++
Sbjct: 181 SFVIGFNSDSPHFNSCKIWEFEEAHQRWLPLIELGSSEDKGDRVHAVAWAPNIGRPYEII 240

Query: 722 AVATCKGIAIWHVGLNPESDGRLSAEKVTLLAGHDGEVWQLDWDMSGMTLASTGGDGMVR 901
           AVATCKGI IWH G NPE+D  LS E V +L GHDGEVWQL+WDM GMTLASTGGDGMV+
Sbjct: 241 AVATCKGIYIWHAGFNPEADRGLSTENVAVLPGHDGEVWQLEWDMGGMTLASTGGDGMVK 300

Query: 902 LWQSNLNGVWHEQAALECN 958
           LWQ+NLNGVWHEQA L+CN
Sbjct: 301 LWQANLNGVWHEQAVLDCN 319


>ref|NP_001043597.1| Os01g0620100 [Oryza sativa Japonica Group]
           gi|54290371|dbj|BAD61210.1| SEC13 protein homolog
           YGL100w-like [Oryza sativa Japonica Group]
           gi|54290874|dbj|BAD61535.1| SEC13 protein homolog
           YGL100w-like [Oryza sativa Japonica Group]
           gi|113533128|dbj|BAF05511.1| Os01g0620100 [Oryza sativa
           Japonica Group] gi|215687215|dbj|BAG91780.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222618872|gb|EEE55004.1| hypothetical protein
           OsJ_02639 [Oryza sativa Japonica Group]
          Length = 324

 Score =  477 bits (1228), Expect = e-132
 Identities = 221/320 (69%), Positives = 263/320 (82%), Gaps = 1/320 (0%)
 Frame = +2

Query: 2   RVVATLEKGAQCCGWSHGGRRLAAGYADGAVSVHDS-ADPSARYSARWIAHSCGVVNVVW 178
           R VA L  GA C GW+H GRRLAAG  DG VSV+DS + PS   S++W AH   ++N+VW
Sbjct: 4   RQVAELGAGAACVGWNHCGRRLAAGAVDGFVSVYDSQSQPSP--SSKWQAHKHAILNIVW 61

Query: 179 VPPEFGEAIACICADGTLSLWEEIGQDAQAVSWKLCKLFEGTGTQVLDVQFGVSLMTLKL 358
           +PP++G+AIAC+CADGTLSLWEE+ +D Q  +W+ CK+FE   + +L VQFG+ L +LK+
Sbjct: 62  LPPDYGDAIACVCADGTLSLWEEVSEDDQLPTWRKCKVFESGNSHILHVQFGLQLSSLKM 121

Query: 359 VAAYSDGYVKVYESLDPLELNKWQLQAEFQNVIDSVSRFGKPSCMSASIAWSPRRGESQQ 538
           V AYSDG VKVYE LD LEL+KWQLQAEFQN+ D VSR GKP+C SASIAWSPRRGESQQ
Sbjct: 122 VTAYSDGQVKVYELLDSLELDKWQLQAEFQNITDPVSRSGKPACTSASIAWSPRRGESQQ 181

Query: 539 SSFVLGYNSDLSQFNSPKVWEFEEAHQRWVPVAELALPGDKGDRVHAVAWAPNIGRPYEV 718
           +SF +G+NSD   FNS K+WEFEEAHQRW+P+ EL  P DKGD VHAVAWAPNIGRPYE+
Sbjct: 182 ASFAIGFNSDSPNFNSCKIWEFEEAHQRWLPLVELGSPQDKGDIVHAVAWAPNIGRPYEI 241

Query: 719 VAVATCKGIAIWHVGLNPESDGRLSAEKVTLLAGHDGEVWQLDWDMSGMTLASTGGDGMV 898
           +AVATCKGIAIWH+GL+ ESDG LS E V +L+GHDGEV QL+WDM GMTLASTGGDGMV
Sbjct: 242 IAVATCKGIAIWHIGLSAESDGSLSTENVAVLSGHDGEVLQLEWDMGGMTLASTGGDGMV 301

Query: 899 RLWQSNLNGVWHEQAALECN 958
           +LWQ+NLNGVWHEQA L+CN
Sbjct: 302 KLWQANLNGVWHEQAVLDCN 321


>dbj|BAK08348.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 323

 Score =  476 bits (1224), Expect = e-132
 Identities = 222/317 (70%), Positives = 260/317 (82%)
 Frame = +2

Query: 8   VATLEKGAQCCGWSHGGRRLAAGYADGAVSVHDSADPSARYSARWIAHSCGVVNVVWVPP 187
           VA L  GA CCGW+H GRRLAAG  DG+VSV+DS  PS   S++W AH   VV VVW+PP
Sbjct: 6   VAQLGPGAACCGWNHCGRRLAAGAVDGSVSVYDS-QPSP--SSKWQAHEHAVVAVVWLPP 62

Query: 188 EFGEAIACICADGTLSLWEEIGQDAQAVSWKLCKLFEGTGTQVLDVQFGVSLMTLKLVAA 367
           ++G+AIAC+CADGTLSLWEEI +D Q   W+ CK FEG  + +L+VQFG+ L +LK+V A
Sbjct: 63  DYGDAIACVCADGTLSLWEEIAEDDQLPIWRKCKFFEGGSSHILNVQFGLLLSSLKMVVA 122

Query: 368 YSDGYVKVYESLDPLELNKWQLQAEFQNVIDSVSRFGKPSCMSASIAWSPRRGESQQSSF 547
           YSDG VKVYE LD LEL+KWQLQAE QN+ D VSR GKP+C+SASIAWSPRRGE QQ+SF
Sbjct: 123 YSDGQVKVYELLDSLELDKWQLQAELQNITDPVSRIGKPACISASIAWSPRRGEGQQASF 182

Query: 548 VLGYNSDLSQFNSPKVWEFEEAHQRWVPVAELALPGDKGDRVHAVAWAPNIGRPYEVVAV 727
            +G++SD   FNS K+WEFEEAHQRW+PV EL  P DKG+RVHAVAWAPNIGRPYE++AV
Sbjct: 183 AIGFSSDSPNFNSCKIWEFEEAHQRWLPVIELGSPEDKGERVHAVAWAPNIGRPYEMIAV 242

Query: 728 ATCKGIAIWHVGLNPESDGRLSAEKVTLLAGHDGEVWQLDWDMSGMTLASTGGDGMVRLW 907
           ATCKGIA+W VG N ESDGRLS E V +L GH+GEVWQL+WDM GMTLASTG DGMV+LW
Sbjct: 243 ATCKGIAVWRVGFNLESDGRLSTENVAVLPGHNGEVWQLEWDMGGMTLASTGVDGMVKLW 302

Query: 908 QSNLNGVWHEQAALECN 958
           Q+NLNGVWHEQA L+CN
Sbjct: 303 QANLNGVWHEQAVLDCN 319


>ref|NP_001150647.1| LOC100284280 [Zea mays] gi|195640836|gb|ACG39886.1| seh1-like
           protein [Zea mays] gi|414881406|tpg|DAA58537.1| TPA:
           seh1-like protein [Zea mays]
          Length = 323

 Score =  470 bits (1209), Expect = e-130
 Identities = 215/319 (67%), Positives = 257/319 (80%)
 Frame = +2

Query: 2   RVVATLEKGAQCCGWSHGGRRLAAGYADGAVSVHDSADPSARYSARWIAHSCGVVNVVWV 181
           R VA L  G  CCGW+H GRRLAAG  DG+VSV+DS  P    S +W AH   +VNVVW+
Sbjct: 4   RQVAELGPGTACCGWNHCGRRLAAGAVDGSVSVYDSQPPP---SFKWQAHEQAIVNVVWL 60

Query: 182 PPEFGEAIACICADGTLSLWEEIGQDAQAVSWKLCKLFEGTGTQVLDVQFGVSLMTLKLV 361
           PPE+G+AIAC+CADGTLSLWEE+  D Q  +W+ CK+FE   + +L+V FG+ L  LK+V
Sbjct: 61  PPEYGDAIACVCADGTLSLWEEVAADDQLPTWRNCKIFEDGNSHILNVHFGLHLGILKMV 120

Query: 362 AAYSDGYVKVYESLDPLELNKWQLQAEFQNVIDSVSRFGKPSCMSASIAWSPRRGESQQS 541
            AYSDG VKVYE LD LEL+KWQLQAEFQN+ D +SRFGKP+C SASIAW+PRRG SQQ+
Sbjct: 121 TAYSDGQVKVYELLDSLELDKWQLQAEFQNITDPISRFGKPACTSASIAWNPRRGGSQQA 180

Query: 542 SFVLGYNSDLSQFNSPKVWEFEEAHQRWVPVAELALPGDKGDRVHAVAWAPNIGRPYEVV 721
           SF +G+NSD   FNS K+WEFEEAHQRW+P+ EL  P D GD+V AVAWAPNIGRPYE++
Sbjct: 181 SFAIGFNSDSPHFNSCKIWEFEEAHQRWLPLVELGSPEDTGDKVCAVAWAPNIGRPYEII 240

Query: 722 AVATCKGIAIWHVGLNPESDGRLSAEKVTLLAGHDGEVWQLDWDMSGMTLASTGGDGMVR 901
           AVATCKGIAIWH+GLN ++DG  S + V LL GHDGEVWQL+WDM GMTLASTGGDGMV+
Sbjct: 241 AVATCKGIAIWHIGLNADADGGPSTQNVALLNGHDGEVWQLEWDMGGMTLASTGGDGMVK 300

Query: 902 LWQSNLNGVWHEQAALECN 958
           LWQ+NL+GVWHEQA L+C+
Sbjct: 301 LWQANLDGVWHEQAVLDCS 319


>ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vinifera]
           gi|297742315|emb|CBI34464.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  470 bits (1209), Expect = e-130
 Identities = 219/318 (68%), Positives = 260/318 (81%), Gaps = 3/318 (0%)
 Frame = +2

Query: 8   VATLEKGAQCCGWSHGGRRLAAGYADGAVSVHDSADPSARY---SARWIAHSCGVVNVVW 178
           + TL+ G  C  W++ G RLA G  DG +++ DS DP++     ++R   H   VV VVW
Sbjct: 5   LVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSVVKVVW 64

Query: 179 VPPEFGEAIACICADGTLSLWEEIGQDAQAVSWKLCKLFEGTGTQVLDVQFGVSLMTLKL 358
           VPPE+G+A+ CICADGTLSLWEE+ +DAQ + WKLCK F     +VLDVQFGVS  +LK+
Sbjct: 65  VPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPTSLKM 124

Query: 359 VAAYSDGYVKVYESLDPLELNKWQLQAEFQNVIDSVSRFGKPSCMSASIAWSPRRGESQQ 538
           V+AYSDG+VKVYE LDPLEL  WQLQAEFQN  DSVS FGK  C+SAS++W+P+RGESQQ
Sbjct: 125 VSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRGESQQ 184

Query: 539 SSFVLGYNSDLSQFNSPKVWEFEEAHQRWVPVAELALPGDKGDRVHAVAWAPNIGRPYEV 718
           SSFVLG++SD  Q NS KVWEF++ HQRW+PVAELAL GDKGD+V  VAWAPNIGRPYEV
Sbjct: 185 SSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNIGRPYEV 244

Query: 719 VAVATCKGIAIWHVGLNPESDGRLSAEKVTLLAGHDGEVWQLDWDMSGMTLASTGGDGMV 898
           +AVAT KGIAIWH+GLNP+ DGRLS E+V LL+GHDGEVWQ++WDMSGMTLA+TGGDGMV
Sbjct: 245 MAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATTGGDGMV 304

Query: 899 RLWQSNLNGVWHEQAALE 952
           RLWQSNLNGVWHEQAALE
Sbjct: 305 RLWQSNLNGVWHEQAALE 322


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