BLASTX nr result

ID: Dioscorea21_contig00007682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007682
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-...   114   6e-24
ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG4...   110   2e-22
gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-...   110   2e-22
gb|EAZ27498.1| hypothetical protein OsJ_11446 [Oryza sativa Japo...   110   2e-22
ref|NP_001050490.1| Os03g0562200 [Oryza sativa Japonica Group] g...   110   2e-22

>ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-like [Brachypodium
           distachyon]
          Length = 297

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/95 (60%), Positives = 73/95 (76%)
 Frame = -1

Query: 322 ELKIFADAVDEIMACIICECLPRLRKLEAMDCAIPRRAVLQFLDELKDLEYLDISGYESP 143
           ELK+FA  VDE MA IIC+CLPRL+KLE  +  +   A+++FLD L++LEY+DISGYE+ 
Sbjct: 175 ELKVFAVYVDEDMASIICDCLPRLKKLEIPNSDMSCAAIIKFLDCLEELEYMDISGYETS 234

Query: 142 GITGTVLEKASRLKVFHWNSRFEGAPFDYCSDCGE 38
            I+ +VL KASRLKVF WNS+FE   F  CS+CGE
Sbjct: 235 VISSSVLHKASRLKVFVWNSKFELGEFKDCSNCGE 269


>ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG44757.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/95 (58%), Positives = 69/95 (72%)
 Frame = -1

Query: 322 ELKIFADAVDEIMACIICECLPRLRKLEAMDCAIPRRAVLQFLDELKDLEYLDISGYESP 143
           ELK+ A  VDE MA +IC  LPRL+KLE   C +   A+++FLD L+ LE+LDISGYE+ 
Sbjct: 175 ELKVSALYVDEEMASVICNSLPRLKKLEIPSCDMSSAAIIRFLDCLEQLEHLDISGYETS 234

Query: 142 GITGTVLEKASRLKVFHWNSRFEGAPFDYCSDCGE 38
            I+  VLEKASRLKVF WNS+FE   F  CS+CGE
Sbjct: 235 AISSPVLEKASRLKVFLWNSKFELGEFMDCSNCGE 269


>gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/95 (58%), Positives = 69/95 (72%)
 Frame = -1

Query: 322 ELKIFADAVDEIMACIICECLPRLRKLEAMDCAIPRRAVLQFLDELKDLEYLDISGYESP 143
           ELK+ A  VDE MA +IC  LPRL+KLE   C +   A+++FLD L+ LE+LDISGYE+ 
Sbjct: 175 ELKVSALYVDEEMASVICNSLPRLKKLEIPSCDMSSAAIIRFLDCLEQLEHLDISGYETS 234

Query: 142 GITGTVLEKASRLKVFHWNSRFEGAPFDYCSDCGE 38
            I+  VLEKASRLKVF WNS+FE   F  CS+CGE
Sbjct: 235 AISSPVLEKASRLKVFLWNSKFELGEFMDCSNCGE 269


>gb|EAZ27498.1| hypothetical protein OsJ_11446 [Oryza sativa Japonica Group]
          Length = 147

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/98 (57%), Positives = 71/98 (72%)
 Frame = -1

Query: 322 ELKIFADAVDEIMACIICECLPRLRKLEAMDCAIPRRAVLQFLDELKDLEYLDISGYESP 143
           ELK+FA  VDE MA IIC  LPRL+KLE  +  +   A+++FLD L++LEYLDISGYE+ 
Sbjct: 25  ELKVFALYVDEEMASIICNSLPRLKKLEIPNSDMSCAAIIKFLDCLEELEYLDISGYETS 84

Query: 142 GITGTVLEKASRLKVFHWNSRFEGAPFDYCSDCGEDWI 29
            I+  VL+KASRL +F WNS+FE   F  CS+CGE  I
Sbjct: 85  AISSAVLQKASRLNIFIWNSKFELGEFTDCSNCGEHCI 122


>ref|NP_001050490.1| Os03g0562200 [Oryza sativa Japonica Group]
           gi|108709324|gb|ABF97119.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113548961|dbj|BAF12404.1| Os03g0562200 [Oryza sativa
           Japonica Group] gi|215686513|dbj|BAG87774.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215706384|dbj|BAG93240.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193151|gb|EEC75578.1| hypothetical protein
           OsI_12264 [Oryza sativa Indica Group]
          Length = 305

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/98 (57%), Positives = 71/98 (72%)
 Frame = -1

Query: 322 ELKIFADAVDEIMACIICECLPRLRKLEAMDCAIPRRAVLQFLDELKDLEYLDISGYESP 143
           ELK+FA  VDE MA IIC  LPRL+KLE  +  +   A+++FLD L++LEYLDISGYE+ 
Sbjct: 183 ELKVFALYVDEEMASIICNSLPRLKKLEIPNSDMSCAAIIKFLDCLEELEYLDISGYETS 242

Query: 142 GITGTVLEKASRLKVFHWNSRFEGAPFDYCSDCGEDWI 29
            I+  VL+KASRL +F WNS+FE   F  CS+CGE  I
Sbjct: 243 AISSAVLQKASRLNIFIWNSKFELGEFTDCSNCGEHCI 280


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