BLASTX nr result

ID: Dioscorea21_contig00007657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007657
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   216   5e-54
ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   215   1e-53
ref|NP_001241941.1| uncharacterized protein LOC100790543 [Glycin...   213   5e-53
ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|2...   212   1e-52
ref|XP_004156171.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   211   2e-52

>ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
           gi|298204451|emb|CBI16931.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  216 bits (551), Expect = 5e-54
 Identities = 119/227 (52%), Positives = 152/227 (66%), Gaps = 6/227 (2%)
 Frame = -1

Query: 948 MGSLLCCFRVADVLEEAENSDSLVSRHCICLRCLTQQLSHAYIALFQRGEVHAAASASVR 769
           MGS+ CC RV D  ++  N +S + R+C+CL C  Q   + Y +LF+RGEV++  S S++
Sbjct: 1   MGSVCCCLRVED-FDDYVNPNSSIYRNCMCLSCFVQNFLNVYTSLFRRGEVNSIPS-SIQ 58

Query: 768 QLPSLASVMAVEDSSLPNTYRSPPRPLPYD-DPRCSR-PRDRLVSRREKCXXXXXXXXEP 595
              SL+S  +++DS L + YRSPPRPLPYD DPR  R  RD LVSRREK         EP
Sbjct: 59  GAASLSSTTSLDDS-LSDMYRSPPRPLPYDVDPRNFRLQRDGLVSRREKGSSHSHEESEP 117

Query: 594 LRRDFDENNAETKAEKDKRS----GSKHEGVKLCCSNSSTDVTSGSTYYFSSSEDEDVCP 427
           LR D D  ++E+   +DK +    GSK +  +    +S    T G  + +SSSEDEDVCP
Sbjct: 118 LRSDTD-GDSESLITRDKWNESDDGSKEQRPRSSVKHSMAKTTMGLGFIYSSSEDEDVCP 176

Query: 426 TCLEEYTSENPKIVMQCSHHFHLSCIYEWMERSEICPVCGKVMVFNE 286
           TCLEEYT ENPKI+ +CSHHFHL CIYEWMERSE CPVCGKVM+F+E
Sbjct: 177 TCLEEYTPENPKIMTKCSHHFHLGCIYEWMERSETCPVCGKVMMFDE 223


>ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 227

 Score =  215 bits (548), Expect = 1e-53
 Identities = 120/227 (52%), Positives = 147/227 (64%), Gaps = 6/227 (2%)
 Frame = -1

Query: 948 MGSLLCCFRVADVLEEAENSDSLVSRHCICLRCLTQQLSHAYIALFQRGEVHAAASASVR 769
           MG++ CCF V D  E+  N +S V R+C+CL C  Q     Y ++F+RGEVHA  S S++
Sbjct: 1   MGAVCCCFNVDD-FEDYMNPNSSVYRNCMCLSCFVQNFLTVYESIFRRGEVHAIPS-SIQ 58

Query: 768 QLPSLASVMAVEDSSLPNTYRSPPRPLPYD-DPRCSRP-RDRLVSRREKCXXXXXXXXEP 595
              S+ S  ++ D+SL + YRSPPRPLPYD DPR  R  R+ LVSRREK         EP
Sbjct: 59  GAASMTSTASL-DNSLSDMYRSPPRPLPYDADPRFFRSQREGLVSRREKGSSHLNEESEP 117

Query: 594 LRRDFDEN----NAETKAEKDKRSGSKHEGVKLCCSNSSTDVTSGSTYYFSSSEDEDVCP 427
           LR D D +    N+  K       GSK    K     SS  +T+G+   +SSSE+EDVCP
Sbjct: 118 LRGDVDADSESLNSGGKWNDTSEDGSKEYRSKSSVRLSSAKLTTGAGVVYSSSEEEDVCP 177

Query: 426 TCLEEYTSENPKIVMQCSHHFHLSCIYEWMERSEICPVCGKVMVFNE 286
           TCLEEYT ENPKIV +CSHHFHL CIYEWMERS+ CPVCGKVMVF+E
Sbjct: 178 TCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDE 224


>ref|NP_001241941.1| uncharacterized protein LOC100790543 [Glycine max]
           gi|255641258|gb|ACU20906.1| unknown [Glycine max]
          Length = 226

 Score =  213 bits (543), Expect = 5e-53
 Identities = 118/226 (52%), Positives = 144/226 (63%), Gaps = 5/226 (2%)
 Frame = -1

Query: 948 MGSLLCCFRVADVLEEAENSDSLVSRHCICLRCLTQQLSHAYIALFQRGEVHAAASASVR 769
           MG++ CCF V D  E+  N +S V R+C+CL C  Q     Y ++F+RGEVHA  S S++
Sbjct: 1   MGAVCCCFNVDD-FEDFMNPNSSVYRNCMCLSCFVQNFFTMYESIFRRGEVHAIPS-SIQ 58

Query: 768 QLPSLASVMAVEDSSLPNTYRSPPRPLPYDDPRCSRP-RDRLVSRREKCXXXXXXXXEPL 592
              S+ S  ++ D+SL + YRSPPRPLPYD  R  R  RD LVSRREK         EPL
Sbjct: 59  GAASMTSTASL-DNSLSDMYRSPPRPLPYDADRFFRSQRDGLVSRREKGSSHLNEESEPL 117

Query: 591 RRDFDEN----NAETKAEKDKRSGSKHEGVKLCCSNSSTDVTSGSTYYFSSSEDEDVCPT 424
           R D D +    N+  K       GSK    K     SS  +T+G+   +SSSE+EDVCPT
Sbjct: 118 RGDVDADSESLNSAGKWNDTSEDGSKEYRSKSTVRLSSAKLTTGAGVVYSSSEEEDVCPT 177

Query: 423 CLEEYTSENPKIVMQCSHHFHLSCIYEWMERSEICPVCGKVMVFNE 286
           CLEEYT ENPKIV +CSHHFHL CIYEWMER + CPVCGKVMVF+E
Sbjct: 178 CLEEYTEENPKIVTKCSHHFHLCCIYEWMERGDSCPVCGKVMVFDE 223


>ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|222873147|gb|EEF10278.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  212 bits (540), Expect = 1e-52
 Identities = 120/228 (52%), Positives = 148/228 (64%), Gaps = 7/228 (3%)
 Frame = -1

Query: 948 MGSLLCCFRVADVLEEAENSDSLVSRHCICLRCLTQQLSHAYIALFQRGEVHAAASASVR 769
           MGS+ CC  V D  E+  N ++   R+C+CL C  Q   H Y ++F+RG+VH+  S S++
Sbjct: 1   MGSVCCCLHVDD-FEDYMNPENSEYRNCLCLSCFVQNFLHVYTSIFRRGQVHSVPS-SIQ 58

Query: 768 QLPSLASVMAVEDSSLPNTYRSPPRPLPYD-DPRCSR-PRDRLVSRREKCXXXXXXXXEP 595
              SL S     D+SL   YRSPPRPLPYD DPRC R  RD LVSRREK         EP
Sbjct: 59  GAASLTSSSL--DNSLAEMYRSPPRPLPYDADPRCLRLQRDGLVSRREKGSSHSHEESEP 116

Query: 594 LRRDFDENNAETKAEKDKRSGSKHEGVKLCCSNSSTDVTS-----GSTYYFSSSEDEDVC 430
           LR D D ++ E+    DK + S  EG K   S SS  ++S     G  Y +SSSE+EDVC
Sbjct: 117 LRSDNDADS-ESFRTGDKWNASACEGGKEQHSRSSLKLSSAKATVGIGYVYSSSEEEDVC 175

Query: 429 PTCLEEYTSENPKIVMQCSHHFHLSCIYEWMERSEICPVCGKVMVFNE 286
           PTCL+EYT E+PKI+ +CSHHFHL CIYEWMERS+ CPVCGKVMVF+E
Sbjct: 176 PTCLDEYTPEDPKIMTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDE 223


>ref|XP_004156171.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
           sativus]
          Length = 227

 Score =  211 bits (538), Expect = 2e-52
 Identities = 120/229 (52%), Positives = 146/229 (63%), Gaps = 8/229 (3%)
 Frame = -1

Query: 948 MGSLLCCFRVADVLEEAENSDSLVSRHCICLRCLTQQLSHAYIALFQRGEVHAAASASVR 769
           MG++ CC  V D  E+  N +S V R+C CL C  Q   +AY  +F+RGEVH+ +S S++
Sbjct: 1   MGAVCCCLSVED-FEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSS-SIQ 58

Query: 768 QLPSLASVMAVEDSSLPNTYRSPPRPLPYD-DPRCSR-PRDRLVSRREKCXXXXXXXXEP 595
              S+ S  A  D+SL   YRSPPRPLPYD DPR  R  RD L+SRREK         EP
Sbjct: 59  GATSMNST-ASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEP 117

Query: 594 LRRDFDENNAETKAEKDKRSGS------KHEGVKLCCSNSSTDVTSGSTYYFSSSEDEDV 433
           LR + D  ++++     KR+GS      K    K      ST  TSG  Y ++SSEDEDV
Sbjct: 118 LRSEVD-TDSDSLGSGGKRNGSACLEESKENFGKSSLKFPSTKSTSGLGYAYTSSEDEDV 176

Query: 432 CPTCLEEYTSENPKIVMQCSHHFHLSCIYEWMERSEICPVCGKVMVFNE 286
           CPTCLEEYTSENPKIV +CSHHFHL CIYEWMERS+ CPVCGK M F+E
Sbjct: 177 CPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDE 225


Top