BLASTX nr result

ID: Dioscorea21_contig00007633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007633
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558219.1| PREDICTED: protein arv1 homolog [Brachypodiu...   230   1e-58
ref|XP_002463786.1| hypothetical protein SORBIDRAFT_01g006130 [S...   229   4e-58
gb|ACF83250.1| unknown [Zea mays] gi|414873207|tpg|DAA51764.1| T...   224   1e-56
ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|2...   222   4e-56
ref|NP_001144155.1| uncharacterized protein LOC100277009 [Zea ma...   222   4e-56

>ref|XP_003558219.1| PREDICTED: protein arv1 homolog [Brachypodium distachyon]
          Length = 240

 Score =  230 bits (587), Expect = 1e-58
 Identities = 114/201 (56%), Positives = 148/201 (73%), Gaps = 3/201 (1%)
 Frame = -3

Query: 595 MSKSAKKGEETVVCVNCGTRLNTLYIQYSPGNIRLMKCDNCKAVADPYIECEFMIILIDL 416
           M +   +GEE   CV CG R+ TLY+QYSPGNIRLMKCDNCKAVADPYIECEFMIIL+DL
Sbjct: 1   MGEPKTEGEEAPRCVGCGRRVKTLYVQYSPGNIRLMKCDNCKAVADPYIECEFMIILLDL 60

Query: 415 ILHKPKAYRHLLYNMLSFKSEDIKGTIWKSALLFLLLDAIRVFLL--KRFNDDYGNSFLS 242
           ILHK +AYRHLL+N L   S   KG +++S L+ ++LDA R+ +   K+ + D   S LS
Sbjct: 61  ILHKTRAYRHLLFNKLHIGSSLDKGLLYRSILVHIVLDAFRISVSKGKKADGDSSRSMLS 120

Query: 241 -MPKCREVFLDVLLGNIVFIVVLLLGTRFFVNCSLPITSYLEILLAVFVSSFFKVYLVAM 65
            +  C EV  D LLGNI+F+ +LLLG R+ +  S  +T Y ++LLAV +SS+ K +L+ M
Sbjct: 121 TIFNCSEVLGDALLGNIIFMAMLLLGGRYLIKLSFDLTRYRQVLLAVIISSYIKFFLLTM 180

Query: 64  MVWEFPSAVLYIIEMFVLSSN 2
           MVWEFPS+ ++I+EMFVLSSN
Sbjct: 181 MVWEFPSSAIFIVEMFVLSSN 201


>ref|XP_002463786.1| hypothetical protein SORBIDRAFT_01g006130 [Sorghum bicolor]
           gi|241917640|gb|EER90784.1| hypothetical protein
           SORBIDRAFT_01g006130 [Sorghum bicolor]
          Length = 237

 Score =  229 bits (583), Expect = 4e-58
 Identities = 109/188 (57%), Positives = 141/188 (75%), Gaps = 3/188 (1%)
 Frame = -3

Query: 556 CVNCGTRLNTLYIQYSPGNIRLMKCDNCKAVADPYIECEFMIILIDLILHKPKAYRHLLY 377
           CV CG R+ TL++QYSPGNIRLMKCDNCKAVADPYIECEFMIILIDL+LHK +AYRH+L+
Sbjct: 13  CVGCGGRVKTLFVQYSPGNIRLMKCDNCKAVADPYIECEFMIILIDLVLHKTRAYRHVLF 72

Query: 376 NMLSFKSEDIKGTIWKSALLFLLLDAIRVFLLKRFNDDYGNS---FLSMPKCREVFLDVL 206
           N LS  S   KG +++S L+ + LDA R+   K    D  +S   F ++  C EV  D L
Sbjct: 73  NKLSMGSSVDKGILYRSTLIHIALDAFRISFSKGNRADGASSRSIFSTISNCTEVIGDAL 132

Query: 205 LGNIVFIVVLLLGTRFFVNCSLPITSYLEILLAVFVSSFFKVYLVAMMVWEFPSAVLYII 26
           LGNI+F+++LLLG RF +  S  +  Y ++L AV +SS+FK++L  MMVWEFPS+V++I+
Sbjct: 133 LGNIIFMIILLLGVRFILKLSFDVIRYRDVLFAVIISSYFKLFLFTMMVWEFPSSVIFIV 192

Query: 25  EMFVLSSN 2
           EMFVLSSN
Sbjct: 193 EMFVLSSN 200


>gb|ACF83250.1| unknown [Zea mays] gi|414873207|tpg|DAA51764.1| TPA: hypothetical
           protein ZEAMMB73_865469 [Zea mays]
          Length = 237

 Score =  224 bits (571), Expect = 1e-56
 Identities = 111/188 (59%), Positives = 138/188 (73%), Gaps = 3/188 (1%)
 Frame = -3

Query: 556 CVNCGTRLNTLYIQYSPGNIRLMKCDNCKAVADPYIECEFMIILIDLILHKPKAYRHLLY 377
           CV CG R+ TL++QYSPGNIRLMKCD CKAVADPYIECEFMIILIDL+LHK +AYRH+L+
Sbjct: 13  CVGCGGRVKTLFVQYSPGNIRLMKCDKCKAVADPYIECEFMIILIDLVLHKTRAYRHVLF 72

Query: 376 NMLSFKSEDIKGTIWKSALLFLLLDAIRVFLLKRFNDDYGNS---FLSMPKCREVFLDVL 206
           N LS  S   KG +++S L+ + LD  R+   K       +S   F ++  C EV  D L
Sbjct: 73  NKLSMGSSVDKGILYRSTLIHIALDTFRISFSKGNRAGGASSRSIFSTVSNCTEVVGDAL 132

Query: 205 LGNIVFIVVLLLGTRFFVNCSLPITSYLEILLAVFVSSFFKVYLVAMMVWEFPSAVLYII 26
           LGNIVFI +LLLG RFF+  S  I  Y +IL AV +SS+FK++L  MMVWEFPS+V++I+
Sbjct: 133 LGNIVFIFMLLLGVRFFLKLSFDIIRYRDILFAVIISSYFKLFLFTMMVWEFPSSVIFIV 192

Query: 25  EMFVLSSN 2
           EMFVLSSN
Sbjct: 193 EMFVLSSN 200


>ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|222861013|gb|EEE98555.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  222 bits (566), Expect = 4e-56
 Identities = 109/188 (57%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
 Frame = -3

Query: 556 CVNCGTRLNTLYIQYSPGNIRLMKCDNCKAVADPYIECEFMIILIDLILHKPKAYRHLLY 377
           CV CG  + TL++QYSPGNIRLM+C+NCKAVAD YIECEFMIILIDLILHK KAYRHLL+
Sbjct: 5   CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLF 64

Query: 376 NMLSFKSEDIKGTIWKSALLFLLLDAIRVFLLKRFNDDYGN--SFLSMP-KCREVFLDVL 206
           N+++  + + +G++WKS   FLLLDA R  LLKR   ++G+  SF S+     EV +DV 
Sbjct: 65  NVINQHTVNFEGSLWKSIFAFLLLDAYRSLLLKRNEGEWGSSMSFSSIVWTFEEVIVDVF 124

Query: 205 LGNIVFIVVLLLGTRFFVNCSLPITSYLEILLAVFVSSFFKVYLVAMMVWEFPSAVLYII 26
           +GN VF  + LL  R  +N S+ I+   +ILLA+ VSS+FK++L+A MVWEFPS+V++II
Sbjct: 125 VGNFVFFCIFLLSMRLMLNTSIQISRCKDILLAILVSSYFKIFLIATMVWEFPSSVIFII 184

Query: 25  EMFVLSSN 2
           ++FVLSSN
Sbjct: 185 DLFVLSSN 192


>ref|NP_001144155.1| uncharacterized protein LOC100277009 [Zea mays]
           gi|195637672|gb|ACG38304.1| hypothetical protein [Zea
           mays]
          Length = 237

 Score =  222 bits (566), Expect = 4e-56
 Identities = 110/188 (58%), Positives = 137/188 (72%), Gaps = 3/188 (1%)
 Frame = -3

Query: 556 CVNCGTRLNTLYIQYSPGNIRLMKCDNCKAVADPYIECEFMIILIDLILHKPKAYRHLLY 377
           CV CG R+ TL++QYSPGNIRLMKCD CKAVADPYIECEFMIILIDL+LHK +AY H+L+
Sbjct: 13  CVGCGGRVKTLFVQYSPGNIRLMKCDKCKAVADPYIECEFMIILIDLVLHKTRAYHHVLF 72

Query: 376 NMLSFKSEDIKGTIWKSALLFLLLDAIRVFLLKRFNDDYGNS---FLSMPKCREVFLDVL 206
           N LS  S   KG +++S L+ + LD  R+   K       +S   F ++  C EV  D L
Sbjct: 73  NKLSMGSSVDKGILYRSTLIHIALDTFRISFSKGNRAGGASSRSIFSTVSNCTEVVGDAL 132

Query: 205 LGNIVFIVVLLLGTRFFVNCSLPITSYLEILLAVFVSSFFKVYLVAMMVWEFPSAVLYII 26
           LGNIVFI +LLLG RFF+  S  I  Y +IL AV +SS+FK++L  MMVWEFPS+V++I+
Sbjct: 133 LGNIVFIFMLLLGVRFFLKLSFDIIRYRDILFAVIISSYFKLFLFTMMVWEFPSSVIFIV 192

Query: 25  EMFVLSSN 2
           EMFVLSSN
Sbjct: 193 EMFVLSSN 200


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