BLASTX nr result

ID: Dioscorea21_contig00007559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007559
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-bindin...   613   e-173
emb|CBI21786.3| unnamed protein product [Vitis vinifera]              605   e-171
ref|XP_002513417.1| GTP-binding protein, putative [Ricinus commu...   602   e-170
ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-bindin...   599   e-169
ref|XP_003531819.1| PREDICTED: GTP-dependent nucleic acid-bindin...   597   e-168

>ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
            [Vitis vinifera]
          Length = 422

 Score =  613 bits (1581), Expect = e-173
 Identities = 323/384 (84%), Positives = 344/384 (89%), Gaps = 1/384 (0%)
 Frame = -1

Query: 1151 SSSLFLHWQWRRLYSSGS-RFSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANYPFCTI 975
            S SLF H   +   SS S + SMSLKAGIVGLPNVGKSTLFNAVVENGKAQAAN+PFCTI
Sbjct: 31   SQSLFFHAFPKPFSSSSSAKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTI 90

Query: 974  EPNVGIVAVPDSRLNVLSNLSKSQRAVPASIEFVDIAGLVKGASKGEGLGNKFLSHIREV 795
            EPNVGIVAVPD RL+VLS++SKSQR VPASIEFVDIAGLVKGAS+GEGLGNKFLSHIREV
Sbjct: 91   EPNVGIVAVPDPRLHVLSDISKSQRVVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREV 150

Query: 794  DSILQIVRCFDDNDIVHVNGKVDPKSDIDVINLELVLSDLDQIEXXXXXXXXXXXXXXXX 615
            DSILQ+VRCF+DNDIVHVNGKVDPKSDIDVINLELV SDLDQIE                
Sbjct: 151  DSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSDLDQIEKRMEKLKKGKAKDSQS 210

Query: 614  XXKEEAEKSALEKIQQTLMDGKPARSVSLTDFERESIQHLCLLTMKPVIYVANVAESDLV 435
              KEEAEKSALE+I++ LMDGKPARSV+LTDFE+++I+HLCLLTMKP+IYVANVAESDL 
Sbjct: 211  KLKEEAEKSALERIREALMDGKPARSVTLTDFEKDAIKHLCLLTMKPIIYVANVAESDLA 270

Query: 434  EPKSNPYVIEVMNAASELQSGIVTISAQVESELTELPLEERIEYLKSLGVNESGLGNLIG 255
            EP SNPYV EVMN ASELQSGIVTISAQVESELTELP EER E+LKSLGV+ESGLGNLI 
Sbjct: 271  EPGSNPYVKEVMNLASELQSGIVTISAQVESELTELPSEERTEFLKSLGVSESGLGNLIR 330

Query: 254  ATYNLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAG 75
            ATY+LLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAG
Sbjct: 331  ATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAG 390

Query: 74   SLAAAREKGLLRSEGKDYIVQEGD 3
            SLAAAREKGLLRSEGKDYIVQEGD
Sbjct: 391  SLAAAREKGLLRSEGKDYIVQEGD 414


>emb|CBI21786.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  605 bits (1561), Expect = e-171
 Identities = 314/362 (86%), Positives = 333/362 (91%)
 Frame = -1

Query: 1088 MSLKAGIVGLPNVGKSTLFNAVVENGKAQAANYPFCTIEPNVGIVAVPDSRLNVLSNLSK 909
            MSLKAGIVGLPNVGKSTLFNAVVENGKAQAAN+PFCTIEPNVGIVAVPD RL+VLS++SK
Sbjct: 1    MSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLHVLSDISK 60

Query: 908  SQRAVPASIEFVDIAGLVKGASKGEGLGNKFLSHIREVDSILQIVRCFDDNDIVHVNGKV 729
            SQR VPASIEFVDIAGLVKGAS+GEGLGNKFLSHIREVDSILQ+VRCF+DNDIVHVNGKV
Sbjct: 61   SQRVVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDNDIVHVNGKV 120

Query: 728  DPKSDIDVINLELVLSDLDQIEXXXXXXXXXXXXXXXXXXKEEAEKSALEKIQQTLMDGK 549
            DPKSDIDVINLELV SDLDQIE                  KEEAEKSALE+I++ LMDGK
Sbjct: 121  DPKSDIDVINLELVFSDLDQIEKRMEKLKKGKAKDSQSKLKEEAEKSALERIREALMDGK 180

Query: 548  PARSVSLTDFERESIQHLCLLTMKPVIYVANVAESDLVEPKSNPYVIEVMNAASELQSGI 369
            PARSV+LTDFE+++I+HLCLLTMKP+IYVANVAESDL EP SNPYV EVMN ASELQSGI
Sbjct: 181  PARSVTLTDFEKDAIKHLCLLTMKPIIYVANVAESDLAEPGSNPYVKEVMNLASELQSGI 240

Query: 368  VTISAQVESELTELPLEERIEYLKSLGVNESGLGNLIGATYNLLGLRTYFTSGEKETKAW 189
            VTISAQVESELTELP EER E+LKSLGV+ESGLGNLI ATY+LLGLRTYFTSGEKETKAW
Sbjct: 241  VTISAQVESELTELPSEERTEFLKSLGVSESGLGNLIRATYSLLGLRTYFTSGEKETKAW 300

Query: 188  TILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLAAAREKGLLRSEGKDYIVQE 9
            TILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLAAAREKGLLRSEGKDYIVQE
Sbjct: 301  TILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLAAAREKGLLRSEGKDYIVQE 360

Query: 8    GD 3
            GD
Sbjct: 361  GD 362


>ref|XP_002513417.1| GTP-binding protein, putative [Ricinus communis]
            gi|223547325|gb|EEF48820.1| GTP-binding protein, putative
            [Ricinus communis]
          Length = 417

 Score =  602 bits (1551), Expect = e-170
 Identities = 311/372 (83%), Positives = 336/372 (90%)
 Frame = -1

Query: 1118 RLYSSGSRFSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANYPFCTIEPNVGIVAVPDS 939
            R +SS  + SMSLKAGIVGLPNVGKSTLFNAVVENGKAQAAN+PFCTIEPNVG VAVPD 
Sbjct: 38   RRFSSSFKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGTVAVPDP 97

Query: 938  RLNVLSNLSKSQRAVPASIEFVDIAGLVKGASKGEGLGNKFLSHIREVDSILQIVRCFDD 759
            RL+VLS LSKSQRAVPASIEFVDIAGLVKGAS+GEGLGNKFLSHIREVDSILQ+VRCF+D
Sbjct: 98   RLHVLSGLSKSQRAVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFED 157

Query: 758  NDIVHVNGKVDPKSDIDVINLELVLSDLDQIEXXXXXXXXXXXXXXXXXXKEEAEKSALE 579
            NDIVHV+GKVDPKSDIDVINLELV SDLDQIE                  KEEAEKSALE
Sbjct: 158  NDIVHVSGKVDPKSDIDVINLELVFSDLDQIEKRLEKLKKGKAKDSQSKLKEEAEKSALE 217

Query: 578  KIQQTLMDGKPARSVSLTDFERESIQHLCLLTMKPVIYVANVAESDLVEPKSNPYVIEVM 399
            +IQ  LMDGKPARSV+L+DFE+++I+HLCLLTMKPVIYVANVAESDL  P +NP+V EVM
Sbjct: 218  RIQGALMDGKPARSVALSDFEKDAIKHLCLLTMKPVIYVANVAESDLAVPDNNPHVKEVM 277

Query: 398  NAASELQSGIVTISAQVESELTELPLEERIEYLKSLGVNESGLGNLIGATYNLLGLRTYF 219
            N AS+LQSG+V +SAQVESELTELP++ER EYLKSLGV+ESGLGNLI ATYNLLGLRTYF
Sbjct: 278  NLASDLQSGLVAVSAQVESELTELPVDERTEYLKSLGVSESGLGNLIRATYNLLGLRTYF 337

Query: 218  TSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLAAAREKGLLR 39
            TSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLAAAREKG+LR
Sbjct: 338  TSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLAAAREKGVLR 397

Query: 38   SEGKDYIVQEGD 3
            SEGKDY+VQEGD
Sbjct: 398  SEGKDYVVQEGD 409


>ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-binding protein EngD-like
            [Cucumis sativus] gi|449523505|ref|XP_004168764.1|
            PREDICTED: GTP-dependent nucleic acid-binding protein
            EngD-like [Cucumis sativus]
          Length = 421

 Score =  599 bits (1544), Expect = e-169
 Identities = 310/372 (83%), Positives = 336/372 (90%)
 Frame = -1

Query: 1118 RLYSSGSRFSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANYPFCTIEPNVGIVAVPDS 939
            R +SS S+ SMSL+AGIVGLPNVGKSTLFNAVVENGKAQAAN+PFCTIEPNVG+VAVPD 
Sbjct: 42   RRFSSSSKISMSLRAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGVVAVPDP 101

Query: 938  RLNVLSNLSKSQRAVPASIEFVDIAGLVKGASKGEGLGNKFLSHIREVDSILQIVRCFDD 759
            RL+ LS+LSKSQRAV ASIEFVDIAGLVKGAS+GEGLGNKFLSHIREVDSILQ+VRCF+D
Sbjct: 102  RLHKLSDLSKSQRAVAASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFED 161

Query: 758  NDIVHVNGKVDPKSDIDVINLELVLSDLDQIEXXXXXXXXXXXXXXXXXXKEEAEKSALE 579
            NDIVHVNGK+DPK+DIDVINLELV SDLDQIE                  KEEAEKSALE
Sbjct: 162  NDIVHVNGKIDPKTDIDVINLELVFSDLDQIEKRLEKLKKGKAKDSQSKVKEEAEKSALE 221

Query: 578  KIQQTLMDGKPARSVSLTDFERESIQHLCLLTMKPVIYVANVAESDLVEPKSNPYVIEVM 399
            KIQ+ L+DGKPARSV+LTDFE+++I+HLCLLTMKPVIYVANVAESDL EP SN +V EVM
Sbjct: 222  KIQKVLLDGKPARSVTLTDFEKDAIKHLCLLTMKPVIYVANVAESDLAEPASNLHVKEVM 281

Query: 398  NAASELQSGIVTISAQVESELTELPLEERIEYLKSLGVNESGLGNLIGATYNLLGLRTYF 219
              ASELQSGIVT+SAQVESEL+ELP EER EYLKSLGV+ESGLGNLI ATYNLLGLRTYF
Sbjct: 282  GLASELQSGIVTVSAQVESELSELPSEERFEYLKSLGVSESGLGNLIRATYNLLGLRTYF 341

Query: 218  TSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLAAAREKGLLR 39
            TSGEKETKAWTILAGMTAPQAAGVIHSDFE+GFIRAETVAYDDFVAAGS AAAREKGLLR
Sbjct: 342  TSGEKETKAWTILAGMTAPQAAGVIHSDFERGFIRAETVAYDDFVAAGSFAAAREKGLLR 401

Query: 38   SEGKDYIVQEGD 3
            +EGK+YIVQEGD
Sbjct: 402  AEGKEYIVQEGD 413


>ref|XP_003531819.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD [Glycine
            max]
          Length = 420

 Score =  597 bits (1540), Expect = e-168
 Identities = 311/373 (83%), Positives = 337/373 (90%)
 Frame = -1

Query: 1121 RRLYSSGSRFSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANYPFCTIEPNVGIVAVPD 942
            RR  SS S+ SMSLKAGIVGLPNVGKSTLFNAVVENGKAQAAN+PFCTIEPNVGIVAVPD
Sbjct: 41   RRFSSSSSKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPD 100

Query: 941  SRLNVLSNLSKSQRAVPASIEFVDIAGLVKGASKGEGLGNKFLSHIREVDSILQIVRCFD 762
            SRL+VLS+LSKSQRAVPASIEFVDIAGLVKGAS+GEGLGNKFLSHIREVDSILQ+VRCF+
Sbjct: 101  SRLHVLSDLSKSQRAVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFE 160

Query: 761  DNDIVHVNGKVDPKSDIDVINLELVLSDLDQIEXXXXXXXXXXXXXXXXXXKEEAEKSAL 582
            DNDIVHVNGKVDPKSDIDVINLELV SDLDQIE                   EEAEKSAL
Sbjct: 161  DNDIVHVNGKVDPKSDIDVINLELVFSDLDQIEKRIDKLKKGKAKDSQKLK-EEAEKSAL 219

Query: 581  EKIQQTLMDGKPARSVSLTDFERESIQHLCLLTMKPVIYVANVAESDLVEPKSNPYVIEV 402
            EKI++ LMDGKPARSV+LTDFER++++HLCLLTMKPVIYVANVAESDL +P +N YV +V
Sbjct: 220  EKIREALMDGKPARSVTLTDFERDAVKHLCLLTMKPVIYVANVAESDLADPANNNYVKDV 279

Query: 401  MNAASELQSGIVTISAQVESELTELPLEERIEYLKSLGVNESGLGNLIGATYNLLGLRTY 222
             N  SELQS IVTISAQVE+ELTELP+EER EYL+SLGV+ESGLGNLI ATY+LLGLRTY
Sbjct: 280  TNVVSELQSRIVTISAQVEAELTELPVEERQEYLQSLGVSESGLGNLIRATYDLLGLRTY 339

Query: 221  FTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLAAAREKGLL 42
            FTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETV+Y+DFVAAGSL+AAREKGLL
Sbjct: 340  FTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVSYEDFVAAGSLSAAREKGLL 399

Query: 41   RSEGKDYIVQEGD 3
            RSEGKDY+VQE D
Sbjct: 400  RSEGKDYVVQEAD 412


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