BLASTX nr result
ID: Dioscorea21_contig00007543
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00007543
(594 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2... 218 6e-55
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 213 2e-53
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 213 2e-53
ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containi... 205 4e-51
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,... 204 1e-50
>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
predicted protein [Populus trichocarpa]
Length = 1480
Score = 218 bits (555), Expect = 6e-55
Identities = 109/199 (54%), Positives = 148/199 (74%), Gaps = 2/199 (1%)
Frame = -1
Query: 591 EREILFSIMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAEY 412
+RE L SI++++ SSGRHAE DLL FLKE +P S +I EA + MLCK Q +AA+ EY
Sbjct: 636 DRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAALKEY 695
Query: 411 NMVRVCNFESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINIF 232
+ R F S+ M+ESLI CC E E EASQ+FSDM+F G++ S +Y+S++ ++
Sbjct: 696 SNNRELGFTG---SFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLY 752
Query: 231 CKMGFPETSHHLVNQAERAGIVI-NLSIYVNLIETYGRLKMWQRAESIVEDLRLRSL-VD 58
CKMGFPET+HHL++ AE GI++ N+S+YVN+IE YGRLK+WQ+AES+ +LR R + VD
Sbjct: 753 CKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVD 812
Query: 57 RKIWNALINAYAANGRYEQ 1
RK+WNALI AYAA+G YE+
Sbjct: 813 RKVWNALIEAYAASGCYER 831
Score = 59.7 bits (143), Expect = 4e-07
Identities = 38/191 (19%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
Frame = -1
Query: 570 IMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAEYNMVRVCN 391
+++AF +G E+ + + +K + + +L + Q A + +
Sbjct: 889 MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAG 948
Query: 390 FESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINIFCKMGFPE 211
F+ + +N + + E+ F + Q++ +K GLEP Y+++I ++C+ PE
Sbjct: 949 FKPDLSIWNSVLKMYVAIED---FRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPE 1005
Query: 210 TSHHLVNQAERAGIVINLSIYVNLIETYGRLKMWQRAESIVEDLRLRSL-VDRKIWNALI 34
L+++ AG+ L Y +L+ ++G+ ++ ++AE + E+L+ + +DR ++ ++
Sbjct: 1006 EGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMM 1065
Query: 33 NAYAANGRYEQ 1
Y +G + +
Sbjct: 1066 KIYRNSGSHSK 1076
Score = 57.4 bits (137), Expect = 2e-06
Identities = 40/197 (20%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Frame = -1
Query: 594 PEREILFSIMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAE 415
P+ I S++ +++ + + +KE I M C+DH+ E +
Sbjct: 951 PDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSL 1010
Query: 414 YNMVRVCNFESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINI 235
+ +RV E + Y+SL+ + + +A ++F +++ G + Y +++ I
Sbjct: 1011 MHEMRVAGLEP---KLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKI 1067
Query: 234 FCKMGFPETSHHLVNQAERAGIVINLSIYVNLIETYGRLKMWQRAESIVEDLR-LRSLVD 58
+ G + L + + AG+ ++ L+ +YG Q AE ++ +L+ S +
Sbjct: 1068 YRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLS 1127
Query: 57 RKIWNALINAYAANGRY 7
++++I+AY NG Y
Sbjct: 1128 TLPYSSVIDAYLRNGDY 1144
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 213 bits (542), Expect = 2e-53
Identities = 107/199 (53%), Positives = 147/199 (73%), Gaps = 2/199 (1%)
Frame = -1
Query: 591 EREILFSIMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAEY 412
+RE L SI+ ++ SSGRH E +LL+FL+E + S LI EA I MLCK HQ A+ EY
Sbjct: 604 DRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREY 663
Query: 411 NMVRVCNFESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINIF 232
R +F S+ MYESL++CCEE E F EASQIFSDM+F G+EPS +Y S++ +
Sbjct: 664 GKAR--DFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTY 721
Query: 231 CKMGFPETSHHLVNQAERAGIVI-NLSIYVNLIETYGRLKMWQRAESIVEDLRLR-SLVD 58
CKMGFPET+H+L++QAE G++ ++SI+ +IE YG+LK+WQ+AES+V LR + ++VD
Sbjct: 722 CKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVD 781
Query: 57 RKIWNALINAYAANGRYEQ 1
RK+WNALI+AYAA+G YE+
Sbjct: 782 RKVWNALIHAYAASGCYER 800
Score = 57.8 bits (138), Expect = 1e-06
Identities = 39/191 (20%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Frame = -1
Query: 570 IMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAEYNMVRVCN 391
+++AF +G E+ + +K + + I +L K + A + + V
Sbjct: 858 MLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAR 917
Query: 390 FESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINIFCKMGFPE 211
F+ +++ S++ F + Q++ ++ GL+P Y+++I ++C+ PE
Sbjct: 918 FKP---DLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPE 974
Query: 210 TSHHLVNQAERAGIVINLSIYVNLIETYGRLKMWQRAESIVEDLRLRSL-VDRKIWNALI 34
L+++ R G+ L Y +LI +G+L+M ++AE + E L + +DR ++ ++
Sbjct: 975 EGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMM 1034
Query: 33 NAYAANGRYEQ 1
+ +G + +
Sbjct: 1035 KMFRNSGNHSK 1045
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 213 bits (542), Expect = 2e-53
Identities = 107/199 (53%), Positives = 147/199 (73%), Gaps = 2/199 (1%)
Frame = -1
Query: 591 EREILFSIMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAEY 412
+RE L SI+ ++ SSGRH E +LL+FL+E + S LI EA I MLCK HQ A+ EY
Sbjct: 636 DRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREY 695
Query: 411 NMVRVCNFESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINIF 232
R +F S+ MYESL++CCEE E F EASQIFSDM+F G+EPS +Y S++ +
Sbjct: 696 GKAR--DFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTY 753
Query: 231 CKMGFPETSHHLVNQAERAGIVI-NLSIYVNLIETYGRLKMWQRAESIVEDLRLR-SLVD 58
CKMGFPET+H+L++QAE G++ ++SI+ +IE YG+LK+WQ+AES+V LR + ++VD
Sbjct: 754 CKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVD 813
Query: 57 RKIWNALINAYAANGRYEQ 1
RK+WNALI+AYAA+G YE+
Sbjct: 814 RKVWNALIHAYAASGCYER 832
Score = 57.4 bits (137), Expect = 2e-06
Identities = 39/191 (20%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Frame = -1
Query: 570 IMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAEYNMVRVCN 391
+++AF +G E+ + +K + + I +L K + A + + V
Sbjct: 890 MLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAX 949
Query: 390 FESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINIFCKMGFPE 211
F+ +++ S++ F + Q++ ++ GL+P Y+++I ++C+ PE
Sbjct: 950 FKP---DLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPE 1006
Query: 210 TSHHLVNQAERAGIVINLSIYVNLIETYGRLKMWQRAESIVEDLRLRSL-VDRKIWNALI 34
L+++ R G+ L Y +LI +G+L+M ++AE + E L + +DR ++ ++
Sbjct: 1007 EGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMM 1066
Query: 33 NAYAANGRYEQ 1
+ +G + +
Sbjct: 1067 KMFRNSGNHSK 1077
>ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 205 bits (522), Expect = 4e-51
Identities = 97/198 (48%), Positives = 146/198 (73%), Gaps = 1/198 (0%)
Frame = -1
Query: 594 PEREILFSIMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAE 415
P+ + L SI++A+ ++G+H E LL F++E P+S LI+E +I +LCK+ + AA+ E
Sbjct: 444 PDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQE 503
Query: 414 YNMVRVCNFESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINI 235
Y+ +++ S G N+YE LI C EE EFF EASQ+FSDM+F+G+EPS KIY+S+I+
Sbjct: 504 YSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISA 563
Query: 234 FCKMGFPETSHHLVNQAERAGIVIN-LSIYVNLIETYGRLKMWQRAESIVEDLRLRSLVD 58
+CK+GFPET+H L+++A ++GI +N LS V +IE YG++K+WQ AE+ V+ L+ +D
Sbjct: 564 YCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSID 623
Query: 57 RKIWNALINAYAANGRYE 4
R+IWNALI+AYA +G YE
Sbjct: 624 RRIWNALIHAYAESGLYE 641
>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1429
Score = 204 bits (518), Expect = 1e-50
Identities = 110/199 (55%), Positives = 144/199 (72%), Gaps = 2/199 (1%)
Frame = -1
Query: 591 EREILFSIMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAEY 412
+ E L SI++++ SSGR AE DLL FLK S L+AEA+I LCK Q +AA+ EY
Sbjct: 592 DSENLLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQLDAALKEY 651
Query: 411 NMVRVCNFESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINIF 232
N R F+ S MYESLI CCEE EF EASQIFSDM+F G++PS +Y S++ ++
Sbjct: 652 NDTR--EFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMY 709
Query: 231 CKMGFPETSHHLVNQAERAGIVIN-LSIYVNLIETYGRLKMWQRAESIVEDLRLR-SLVD 58
CKMGFPET+H+L++ AE G+ + +SI V +IETYG+LK+WQ+AES+V +LR R + VD
Sbjct: 710 CKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVD 769
Query: 57 RKIWNALINAYAANGRYEQ 1
RK+WNALI AYAA+G YEQ
Sbjct: 770 RKVWNALIQAYAASGCYEQ 788
Score = 57.8 bits (138), Expect = 1e-06
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 570 IMNAFISSGRHAEMHDLLNFLKESAPNSQTLIAEATIFMLCKDHQTEAAIAEYNMVRVCN 391
I++AF AE + +K + + I +LCK + A +
Sbjct: 846 ILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAG 905
Query: 390 FESIGASYNMYESLIICCEETEFFHEASQIFSDMKFLGLEPSWKIYDSVINIFCKMGFPE 211
F +++ S++ + F + QI+ +K GL+P Y+++I ++C+ PE
Sbjct: 906 FRP---DLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPE 962
Query: 210 TSHHLVNQAERAGIVINLSIYVNLIETYGRLKMWQRAESIVEDLRLR-SLVDRKIWNALI 34
L+++ R G+ L Y +LI +G+ ++ AE + E+L + S +DR ++ ++
Sbjct: 963 EGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMM 1022
Query: 33 NAYAANGRYEQ 1
Y +G + +
Sbjct: 1023 KIYRNSGNHSK 1033