BLASTX nr result

ID: Dioscorea21_contig00006482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006482
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW77526.1| transcription factor/ transcription initiation fa...   258   2e-66
ref|NP_001148522.1| LOC100282138 [Zea mays] gi|195619992|gb|ACG3...   258   2e-66
ref|XP_003568681.1| PREDICTED: uncharacterized protein LOC100827...   257   4e-66
gb|AFW81478.1| transcription factor/ transcription initiation fa...   255   1e-65
gb|ACN31103.1| unknown [Zea mays]                                     255   1e-65

>gb|AFW77526.1| transcription factor/ transcription initiation factor [Zea mays]
          Length = 438

 Score =  258 bits (659), Expect = 2e-66
 Identities = 154/325 (47%), Positives = 185/325 (56%), Gaps = 14/325 (4%)
 Frame = +1

Query: 115  SSGVSTVYIHVIDDVVNKVREEFINSGAGESVLNELQASWEMKMVQCGVLSGIIER---- 282
            SS VSTVYI VIDDV++KVRE+FI  G G++VLNELQA WEMKM+ CG +SG IER    
Sbjct: 48   SSNVSTVYISVIDDVISKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIERTKAA 107

Query: 283  -QSIPRPGGAITPVHDLNMXXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXGLAQTPLPG 459
              S     G   PVHDLN+             A+                     TPL  
Sbjct: 108  AASAGGTSGTTPPVHDLNVPYEATSEEYATPTADML----------------FPPTPLQT 151

Query: 460  MVQTPLPGMPQTPLPGLMDQYNIRTGSSDY--GSVSDDRNGL-----DPEAGKPSPFMQP 618
             +QTPLPG            YNI TG SDY    +SD RNG+     DP+AG+PSP+M P
Sbjct: 152  PIQTPLPGTD-------TGMYNIPTGPSDYAPSPISDIRNGMTINGADPKAGRPSPYMPP 204

Query: 619  PSPWMNQRSLGVDVNVAYVEAREELERGASHPSMTQDFLTI-SGKRKRDDYASQLNSKGH 795
            PSPWMNQR LGVDVNVAYVE RE+ +RG     +TQDFLT+ SGKRKRD+Y  QL S   
Sbjct: 205  PSPWMNQRPLGVDVNVAYVEGREDPDRGVQPQPLTQDFLTMSSGKRKRDEYPGQLPSGSF 264

Query: 796  IPQQDGSGDATIE-VFLPETTGAPNSANHGRLNTTAKALYGQGDKTVQAVPQQDGVHDEY 972
            +PQQDGS D  +E V   E      S+   +L T  K +          +PQ DG+ D+Y
Sbjct: 265  VPQQDGSADQIVEFVVSKENANQHWSSIINKLETPTKTV-------TPVIPQCDGIQDDY 317

Query: 973  DDMFHYQGVASEDYNTPSEHVELRA 1047
            +D F + GV +EDYNTP E  E RA
Sbjct: 318  NDQFFFPGVPTEDYNTPGESAEYRA 342


>ref|NP_001148522.1| LOC100282138 [Zea mays] gi|195619992|gb|ACG31826.1| transcription
            factor/ transcription initiation factor [Zea mays]
          Length = 393

 Score =  258 bits (659), Expect = 2e-66
 Identities = 154/325 (47%), Positives = 185/325 (56%), Gaps = 14/325 (4%)
 Frame = +1

Query: 115  SSGVSTVYIHVIDDVVNKVREEFINSGAGESVLNELQASWEMKMVQCGVLSGIIER---- 282
            SS VSTVYI VIDDV++KVRE+FI  G G++VLNELQA WEMKM+ CG +SG IER    
Sbjct: 3    SSNVSTVYISVIDDVISKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIERTKAA 62

Query: 283  -QSIPRPGGAITPVHDLNMXXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXGLAQTPLPG 459
              S     G   PVHDLN+             A+                     TPL  
Sbjct: 63   AASAGGTSGTTPPVHDLNVPYEATSEEYATPTADML----------------FPPTPLQT 106

Query: 460  MVQTPLPGMPQTPLPGLMDQYNIRTGSSDY--GSVSDDRNGL-----DPEAGKPSPFMQP 618
             +QTPLPG            YNI TG SDY    +SD RNG+     DP+AG+PSP+M P
Sbjct: 107  PIQTPLPGTD-------TGMYNIPTGPSDYAPSPISDIRNGMTINGADPKAGRPSPYMPP 159

Query: 619  PSPWMNQRSLGVDVNVAYVEAREELERGASHPSMTQDFLTI-SGKRKRDDYASQLNSKGH 795
            PSPWMNQR LGVDVNVAYVE RE+ +RG     +TQDFLT+ SGKRKRD+Y  QL S   
Sbjct: 160  PSPWMNQRPLGVDVNVAYVEGREDPDRGVQPQPLTQDFLTMSSGKRKRDEYPGQLPSGSF 219

Query: 796  IPQQDGSGDATIE-VFLPETTGAPNSANHGRLNTTAKALYGQGDKTVQAVPQQDGVHDEY 972
            +PQQDGS D  +E V   E      S+   +L T  K +          +PQ DG+ D+Y
Sbjct: 220  VPQQDGSADQIVEFVVSKENANQHWSSIINKLETPTKTV-------TPVIPQCDGIQDDY 272

Query: 973  DDMFHYQGVASEDYNTPSEHVELRA 1047
            +D F + GV +EDYNTP E  E RA
Sbjct: 273  NDQFFFPGVPTEDYNTPGESAEYRA 297


>ref|XP_003568681.1| PREDICTED: uncharacterized protein LOC100827776 [Brachypodium
            distachyon]
          Length = 400

 Score =  257 bits (656), Expect = 4e-66
 Identities = 154/330 (46%), Positives = 187/330 (56%), Gaps = 20/330 (6%)
 Frame = +1

Query: 115  SSGVSTVYIHVIDDVVNKVREEFINSGAGESVLNELQASWEMKMVQCGVLSGIIERQSIP 294
            S  VSTVYI VIDDV+ KVREEFI+ G G++VLNELQA WEMKM+QCG +SG I+R   P
Sbjct: 3    SGNVSTVYISVIDDVIAKVREEFISYGVGDAVLNELQALWEMKMLQCGAISGNIDRARAP 62

Query: 295  -RPG---------GAITPVHDLNMXXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXGLAQ 444
              PG         G+  PVHDLN+             A+                     
Sbjct: 63   AAPGAGGGGAPGAGSTPPVHDLNVPYEATSEEYATPTADML----------------FPP 106

Query: 445  TPLPGMVQTPLPGMPQTPLPGLMDQYNIRTGSSDY--GSVSDDRNGL-----DPEAGKPS 603
            TPL   +QTPLPG            YNI TG SDY    +SD RNG+     DP+ G+PS
Sbjct: 107  TPLQTPIQTPLPGTE-------AGMYNIPTGPSDYAPSPISDMRNGMAMNGSDPKTGRPS 159

Query: 604  PFMQPPSPWMNQRSLGVDVNVAYVEAREELERGASHPSMTQDFLTI-SGKRKRDDYASQL 780
            P+MQPPSPWMNQR LGVDVNVAY E RE+ +R    P MT+DFL + SGKRKRD+Y  QL
Sbjct: 160  PYMQPPSPWMNQRPLGVDVNVAYEETREDPDRAVQPPQMTKDFLMMSSGKRKRDEYPGQL 219

Query: 781  NSKGHIPQQDGSGDATIEVFLPETTGAPNSANH--GRLNTTAKALYGQGDKTVQAVPQQD 954
             S   +PQQDG+ D  +E F+     A    N    +  +  KA   Q     Q +PQ+D
Sbjct: 220  PSGSFMPQQDGNSDEIVE-FVVSKDNAQQVWNSIMNKQESATKASSTQETTMTQVLPQRD 278

Query: 955  GVHDEYDDMFHYQGVASEDYNTPSEHVELR 1044
            G+ DEY+D F + GV +EDYNTP E  E R
Sbjct: 279  GIQDEYNDQFFFPGVPTEDYNTPGESSEYR 308


>gb|AFW81478.1| transcription factor/ transcription initiation factor [Zea mays]
          Length = 434

 Score =  255 bits (651), Expect = 1e-65
 Identities = 152/325 (46%), Positives = 183/325 (56%), Gaps = 14/325 (4%)
 Frame = +1

Query: 115  SSGVSTVYIHVIDDVVNKVREEFINSGAGESVLNELQASWEMKMVQCGVLSGIIER---- 282
            SS VSTVYI VIDDV++KVRE+FI  G G++VLNELQA WEMKM+ CG +SG I+R    
Sbjct: 47   SSNVSTVYISVIDDVISKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIDRTKAA 106

Query: 283  -QSIPRPGGAITPVHDLNMXXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXGLAQTPLPG 459
              S+    G   PVHDLN+             A+                     TPL  
Sbjct: 107  AASVGGTTGTTPPVHDLNVPYEATSEEYATPTADML----------------FPPTPLQT 150

Query: 460  MVQTPLPGMPQTPLPGLMDQYNIRTGSSDY--GSVSDDRNGL-----DPEAGKPSPFMQP 618
             +QTPLPG            YNI TG SDY    +SD RNG+     DP AG PSP+M P
Sbjct: 151  PIQTPLPGTDTA-------MYNIPTGPSDYAPSPISDVRNGMAINGADPTAGHPSPYMPP 203

Query: 619  PSPWMNQRSLGVDVNVAYVEAREELERGASHPSMTQDFLTI-SGKRKRDDYASQLNSKGH 795
            PSPWMNQR LGVDVNVAYVE RE+ +RG     +TQDFL + SGKRKRD+Y  QL S   
Sbjct: 204  PSPWMNQRPLGVDVNVAYVEGREDPDRGVQPQPLTQDFLMMSSGKRKRDEYPGQLPSGSF 263

Query: 796  IPQQDGSGDATIE-VFLPETTGAPNSANHGRLNTTAKALYGQGDKTVQAVPQQDGVHDEY 972
            +PQQDGS D  +E V   E      S+   +L T  K +          +PQ+DG+ D Y
Sbjct: 264  VPQQDGSADQIVEFVVSKENANQLWSSIGNKLETPTKTI-------TPVIPQRDGIQDNY 316

Query: 973  DDMFHYQGVASEDYNTPSEHVELRA 1047
            +D F + GV +EDYNTP E  E RA
Sbjct: 317  NDQFFFPGVPTEDYNTPGESAEYRA 341


>gb|ACN31103.1| unknown [Zea mays]
          Length = 390

 Score =  255 bits (651), Expect = 1e-65
 Identities = 152/325 (46%), Positives = 183/325 (56%), Gaps = 14/325 (4%)
 Frame = +1

Query: 115  SSGVSTVYIHVIDDVVNKVREEFINSGAGESVLNELQASWEMKMVQCGVLSGIIER---- 282
            SS VSTVYI VIDDV++KVRE+FI  G G++VLNELQA WEMKM+ CG +SG I+R    
Sbjct: 3    SSNVSTVYISVIDDVISKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIDRTKAA 62

Query: 283  -QSIPRPGGAITPVHDLNMXXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXGLAQTPLPG 459
              S+    G   PVHDLN+             A+                     TPL  
Sbjct: 63   AASVGGTTGTTPPVHDLNVPYEATSEEYATPTADML----------------FPPTPLQT 106

Query: 460  MVQTPLPGMPQTPLPGLMDQYNIRTGSSDY--GSVSDDRNGL-----DPEAGKPSPFMQP 618
             +QTPLPG            YNI TG SDY    +SD RNG+     DP AG PSP+M P
Sbjct: 107  PIQTPLPGTDTA-------MYNIPTGPSDYAPSPISDVRNGMAINGADPTAGHPSPYMPP 159

Query: 619  PSPWMNQRSLGVDVNVAYVEAREELERGASHPSMTQDFLTI-SGKRKRDDYASQLNSKGH 795
            PSPWMNQR LGVDVNVAYVE RE+ +RG     +TQDFL + SGKRKRD+Y  QL S   
Sbjct: 160  PSPWMNQRPLGVDVNVAYVEGREDPDRGVQPQPLTQDFLMMSSGKRKRDEYPGQLPSGSF 219

Query: 796  IPQQDGSGDATIE-VFLPETTGAPNSANHGRLNTTAKALYGQGDKTVQAVPQQDGVHDEY 972
            +PQQDGS D  +E V   E      S+   +L T  K +          +PQ+DG+ D Y
Sbjct: 220  VPQQDGSADQIVEFVVSKENANQLWSSIGNKLETPTKTI-------TPVIPQRDGIQDNY 272

Query: 973  DDMFHYQGVASEDYNTPSEHVELRA 1047
            +D F + GV +EDYNTP E  E RA
Sbjct: 273  NDQFFFPGVPTEDYNTPGESAEYRA 297


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