BLASTX nr result

ID: Dioscorea21_contig00006447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006447
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6YUU5.1|MDR_ORYSJ RecName: Full=Putative multidrug resistanc...    97   2e-18
gb|EEE56476.1| hypothetical protein OsJ_05696 [Oryza sativa Japo...    97   2e-18
gb|EAY84812.1| hypothetical protein OsI_06180 [Oryza sativa Indi...    97   2e-18
ref|XP_003618399.1| ABC transporter B family member [Medicago tr...    96   2e-18
ref|XP_002453447.1| hypothetical protein SORBIDRAFT_04g006100 [S...    96   3e-18

>sp|Q6YUU5.1|MDR_ORYSJ RecName: Full=Putative multidrug resistance protein; AltName:
           Full=P-glycoprotein gi|46390962|dbj|BAD16475.1| putative
           multidrug resistance p-glycoprotein [Oryza sativa
           Japonica Group]
          Length = 1245

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/106 (45%), Positives = 64/106 (60%)
 Frame = -1

Query: 319 QQAARLRARYLKAVLRQDIEYFDMKXXXXXXXXXXXXXXXXVIQDFLSEKMPNFIMNCST 140
           +QA+R+RARYL+AVLRQD+EYFD+K                V+QD LSEK+PNF+MN + 
Sbjct: 108 RQASRMRARYLRAVLRQDVEYFDLKKGSTAEVITSVSNDSLVVQDVLSEKVPNFVMNAAM 167

Query: 139 FVGGYLIGFFMMWRLALVVFPTVVXXXXXXXXXXXXXXXITRKIRE 2
           F G Y +GF ++WRL LV  P+VV               + R+IRE
Sbjct: 168 FAGSYAVGFALLWRLTLVALPSVVLLIIPGFMYGRILVGLARRIRE 213


>gb|EEE56476.1| hypothetical protein OsJ_05696 [Oryza sativa Japonica Group]
          Length = 1221

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/106 (45%), Positives = 64/106 (60%)
 Frame = -1

Query: 319 QQAARLRARYLKAVLRQDIEYFDMKXXXXXXXXXXXXXXXXVIQDFLSEKMPNFIMNCST 140
           +QA+R+RARYL+AVLRQD+EYFD+K                V+QD LSEK+PNF+MN + 
Sbjct: 108 RQASRMRARYLRAVLRQDVEYFDLKKGSTAEVITSVSNDSLVVQDVLSEKVPNFVMNAAM 167

Query: 139 FVGGYLIGFFMMWRLALVVFPTVVXXXXXXXXXXXXXXXITRKIRE 2
           F G Y +GF ++WRL LV  P+VV               + R+IRE
Sbjct: 168 FAGSYAVGFALLWRLTLVALPSVVLLIIPGFMYGRILVGLARRIRE 213


>gb|EAY84812.1| hypothetical protein OsI_06180 [Oryza sativa Indica Group]
          Length = 1201

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/106 (45%), Positives = 64/106 (60%)
 Frame = -1

Query: 319 QQAARLRARYLKAVLRQDIEYFDMKXXXXXXXXXXXXXXXXVIQDFLSEKMPNFIMNCST 140
           +QA+R+RARYL+AVLRQD+EYFD+K                V+QD LSEK+PNF+MN + 
Sbjct: 105 RQASRMRARYLRAVLRQDVEYFDLKKGSTAEVITSVSNDSLVVQDVLSEKVPNFVMNAAM 164

Query: 139 FVGGYLIGFFMMWRLALVVFPTVVXXXXXXXXXXXXXXXITRKIRE 2
           F G Y +GF ++WRL LV  P+VV               + R+IRE
Sbjct: 165 FAGSYAVGFALLWRLTLVALPSVVLLIIPGFMYGRILVGLARRIRE 210


>ref|XP_003618399.1| ABC transporter B family member [Medicago truncatula]
           gi|355493414|gb|AES74617.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 489

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/106 (47%), Positives = 65/106 (61%)
 Frame = -1

Query: 319 QQAARLRARYLKAVLRQDIEYFDMKXXXXXXXXXXXXXXXXVIQDFLSEKMPNFIMNCST 140
           +QAAR+RARYLKAVLRQ++ YFD+                 VIQD LSEK+P+F+MN S 
Sbjct: 53  RQAARMRARYLKAVLRQEVAYFDLHVTSTSEVITSVSNDILVIQDVLSEKVPDFLMNTSN 112

Query: 139 FVGGYLIGFFMMWRLALVVFPTVVXXXXXXXXXXXXXXXITRKIRE 2
           F+GGY++ F ++WRLA+V FP VV               + RKIRE
Sbjct: 113 FIGGYIVAFALLWRLAIVGFPFVVLLVIPGFMYGRVSMGLARKIRE 158


>ref|XP_002453447.1| hypothetical protein SORBIDRAFT_04g006100 [Sorghum bicolor]
           gi|241933278|gb|EES06423.1| hypothetical protein
           SORBIDRAFT_04g006100 [Sorghum bicolor]
          Length = 1236

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/106 (43%), Positives = 64/106 (60%)
 Frame = -1

Query: 319 QQAARLRARYLKAVLRQDIEYFDMKXXXXXXXXXXXXXXXXVIQDFLSEKMPNFIMNCST 140
           +QA+R+R RYL+AVLRQD+EYFD+K                V+QD LSEK+PNF+MNC+ 
Sbjct: 102 RQASRMRERYLRAVLRQDVEYFDLKVGSTSEVITSVSNDSLVVQDVLSEKLPNFVMNCAM 161

Query: 139 FVGGYLIGFFMMWRLALVVFPTVVXXXXXXXXXXXXXXXITRKIRE 2
           F+G Y +GF ++W L LV  P+V+               + R+IRE
Sbjct: 162 FLGSYAVGFALLWHLTLVALPSVLLLIIPGFMYGRILIGLARRIRE 207


Top