BLASTX nr result

ID: Dioscorea21_contig00006441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006441
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG57917.1| transcription factor [Lycoris longituba]                78   7e-13
gb|ADG57906.1| transcription factor [Lycoris longituba]                76   3e-12
gb|ADG57814.1| transcription factor [Lycoris longituba]                55   6e-06
gb|ACN26522.1| unknown [Zea mays] gi|414867160|tpg|DAA45717.1| T...    55   8e-06

>gb|ADG57917.1| transcription factor [Lycoris longituba]
          Length = 143

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3   RTFGDFIAPLAPKESFKPPVTMSLLPGXXXXXXXXXXXXXXXXXXISEQNATKAMDLFPK 182
           R+ GD +A +   ++++ P TMSLLPG                  +S++N TK+MDLFP+
Sbjct: 21  RSLGD-LALIGKNDTYRAPTTMSLLPGADVSGDGTKEN-------VSDRNTTKSMDLFPQ 72

Query: 183 LSS---SQDPVANKSSLENSPLTIIYNGKVLVFDNIPAAKAKDLLQM 314
            +       P A K   E SPLTI Y GKVLVFDN P  KAKDL+ +
Sbjct: 73  RAGFGLQTPPAAEKREPEKSPLTIFYGGKVLVFDNFPTDKAKDLMML 119


>gb|ADG57906.1| transcription factor [Lycoris longituba]
          Length = 163

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   RTFGDFIAPLAPKESFKPPVTMSLLPGXXXXXXXXXXXXXXXXXXISEQNATKAMDLFPK 182
           R+ GD +A +   ++++ P+TMSLLPG                  +S++NAT +MD FP+
Sbjct: 21  RSLGD-LALIGKNDTYRAPITMSLLPGVDVSGDDTKEN-------VSDRNATNSMDQFPQ 72

Query: 183 LSS---SQDPVANKSSLENSPLTIIYNGKVLVFDNIPAAKAKDLLQMA 317
            +       P A     + SPLTI Y GKVLVFDN PA KAKDL+ +A
Sbjct: 73  RAGFHLQAPPAAENREPKKSPLTIFYGGKVLVFDNFPADKAKDLMMLA 120


>gb|ADG57814.1| transcription factor [Lycoris longituba]
          Length = 165

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
 Frame = +3

Query: 3   RTFGDF-IAPLAPKES------FKPPVTMSLLPGXXXXXXXXXXXXXXXXXXISEQNATK 161
           R+FGD  +   AP+        ++PP T++LLPG                     QN T 
Sbjct: 25  RSFGDLGVVEFAPRSQEPTKGLYRPPTTLNLLPGIDALA----------------QNQTD 68

Query: 162 AMDLFPKLSSSQDPVANKSSLENSPLTIIYNGKVLVFDNIPAAKAKDLLQMA 317
           A D    +S     V  +   EN+PLTI Y GKV++FDN    KA D++ +A
Sbjct: 69  AND---DVSVLDRKVTKERQQENAPLTIFYGGKVMIFDNFSPEKAADIMNLA 117


>gb|ACN26522.1| unknown [Zea mays] gi|414867160|tpg|DAA45717.1| TPA: putative tify
           domain/CCT motif transcription factor family protein
           [Zea mays]
          Length = 228

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
 Frame = +3

Query: 147 QNATKAMDLFPKLSSSQDPVANKSSL-----ENSPLTIIYNGKVLVFDNIPAAKAKDLLQ 311
           +   + MDLFP+++      A K +      E   LTI Y GKVLVFD+ PA KAKDL+Q
Sbjct: 55  ETGKETMDLFPQIAGFGSEAATKEAPDAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQ 114

Query: 312 MAN 320
           MA+
Sbjct: 115 MAS 117


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