BLASTX nr result

ID: Dioscorea21_contig00006344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006344
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI72265.1| hypothetical protein [Citrus trifoliata]                72   6e-11
ref|XP_004141875.1| PREDICTED: LOB domain-containing protein 38-...    72   7e-11
ref|XP_003524679.1| PREDICTED: LOB domain-containing protein 39-...    72   7e-11
ref|XP_003517339.1| PREDICTED: LOB domain-containing protein 38-...    71   9e-11
ref|XP_003608484.1| LOB domain-containing protein [Medicago trun...    71   9e-11

>gb|AEI72265.1| hypothetical protein [Citrus trifoliata]
          Length = 239

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = -3

Query: 543 NPVSGAVGLLWSGNWHLCQAAVETVLRGGIPRPILDLDLPATPGSDT 403
           NPV+GAVGLLW+GNWH+CQAAVETVLRGG  RP+L+L L +  GS T
Sbjct: 77  NPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVLEL-LSSCGGSPT 122


>ref|XP_004141875.1| PREDICTED: LOB domain-containing protein 38-like [Cucumis sativus]
           gi|449519096|ref|XP_004166571.1| PREDICTED: LOB
           domain-containing protein 38-like [Cucumis sativus]
          Length = 233

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 49/123 (39%), Positives = 59/123 (47%), Gaps = 22/123 (17%)
 Frame = -3

Query: 543 NPVSGAVGLLWSGNWHLCQAAVETVLRGGIPRPILDLDLPATPG------SDTE------ 400
           NPV+GAVGLLW+GNWH+CQAAV+TVLRGG  RPI D     +P       S+TE      
Sbjct: 77  NPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPNLASDDTSETEVGCTDM 136

Query: 399 ----QLYANPSLS------SPKRRRTEGLGLPEGRSRAAXXXXXXXXXXTVSERKRPATP 250
                 Y N   S      SPKR+R+E       + +                  R ATP
Sbjct: 137 WKIRDSYPNSRFSNSRSRLSPKRKRSEEAST---KHQLNDLDLRLTPTFPAKSTLRAATP 193

Query: 249 SMN 241
           SMN
Sbjct: 194 SMN 196


>ref|XP_003524679.1| PREDICTED: LOB domain-containing protein 39-like [Glycine max]
          Length = 227

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 33/49 (67%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
 Frame = -3

Query: 543 NPVSGAVGLLWSGNWHLCQAAVETVLRGGIPRP---ILDLDLPATPGSD 406
           NPV+GAVGLLW+GNWH+CQAAVETVLRGG  RP   ++ LD PA   +D
Sbjct: 77  NPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELMGLDAPAAAATD 125


>ref|XP_003517339.1| PREDICTED: LOB domain-containing protein 38-like [Glycine max]
          Length = 243

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
 Frame = -3

Query: 543 NPVSGAVGLLWSGNWHLCQAAVETVLRGGIPRP---ILDLDLPATPGSDTEQ 397
           NPV+GAVGLLW+GNWH+CQAAVETVLRGG  RP   +L LD P     D  +
Sbjct: 77  NPVNGAVGLLWTGNWHVCQAAVETVLRGGTVRPMPELLGLDAPTPTADDASE 128


>ref|XP_003608484.1| LOB domain-containing protein [Medicago truncatula]
           gi|355509539|gb|AES90681.1| LOB domain-containing
           protein [Medicago truncatula]
          Length = 233

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = -3

Query: 543 NPVSGAVGLLWSGNWHLCQAAVETVLRGGIPRPILDLDLPATPGSDTEQ 397
           NPV+GAVGLLW+GNWH+CQAAVETVLRGG  RP+ +L L   P + T++
Sbjct: 77  NPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPLPELTLLDAPLTATDE 125


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