BLASTX nr result

ID: Dioscorea21_contig00006308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006308
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 4...   269   2e-70
ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein o...   268   4e-70
ref|XP_004148579.1| PREDICTED: chlorophyll a-b binding protein 3...   268   4e-70
ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein o...   268   4e-70
ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein o...   268   4e-70

>ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Cucumis sativus]
          Length = 265

 Score =  269 bits (688), Expect = 2e-70
 Identities = 130/135 (96%), Positives = 133/135 (98%)
 Frame = +3

Query: 3   KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLV 182
           KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+
Sbjct: 93  KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 152

Query: 183 HAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPVTFAELKVK 362
           HAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP  FAELKVK
Sbjct: 153 HAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVK 212

Query: 363 EIKNGRLAMFSMFGF 407
           E+KNGRLAMFSMFGF
Sbjct: 213 ELKNGRLAMFSMFGF 227


>ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  268 bits (684), Expect = 4e-70
 Identities = 130/135 (96%), Positives = 132/135 (97%)
 Frame = +3

Query: 3   KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLV 182
           KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLV
Sbjct: 93  KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152

Query: 183 HAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPVTFAELKVK 362
           HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP  FAELKVK
Sbjct: 153 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVK 212

Query: 363 EIKNGRLAMFSMFGF 407
           E+KNGRLAMFSMFGF
Sbjct: 213 ELKNGRLAMFSMFGF 227


>ref|XP_004148579.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Cucumis sativus] gi|449518125|ref|XP_004166094.1|
           PREDICTED: chlorophyll a-b binding protein 3C,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  268 bits (684), Expect = 4e-70
 Identities = 128/135 (94%), Positives = 133/135 (98%)
 Frame = +3

Query: 3   KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLV 182
           KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+
Sbjct: 93  KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 152

Query: 183 HAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPVTFAELKVK 362
           HAQSILAIWASQVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDP  F+ELKVK
Sbjct: 153 HAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVK 212

Query: 363 EIKNGRLAMFSMFGF 407
           E+KNGRLAMFSMFGF
Sbjct: 213 ELKNGRLAMFSMFGF 227


>ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  268 bits (684), Expect = 4e-70
 Identities = 130/135 (96%), Positives = 132/135 (97%)
 Frame = +3

Query: 3   KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLV 182
           KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLV
Sbjct: 93  KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152

Query: 183 HAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPVTFAELKVK 362
           HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP  FAELKVK
Sbjct: 153 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVK 212

Query: 363 EIKNGRLAMFSMFGF 407
           E+KNGRLAMFSMFGF
Sbjct: 213 ELKNGRLAMFSMFGF 227


>ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like isoform 1 [Cucumis sativus]
           gi|449433638|ref|XP_004134604.1| PREDICTED: chlorophyll
           a-b binding protein of LHCII type I, chloroplastic-like
           isoform 2 [Cucumis sativus]
           gi|449433640|ref|XP_004134605.1| PREDICTED: chlorophyll
           a-b binding protein of LHCII type I, chloroplastic-like
           isoform 3 [Cucumis sativus]
          Length = 265

 Score =  268 bits (684), Expect = 4e-70
 Identities = 130/135 (96%), Positives = 132/135 (97%)
 Frame = +3

Query: 3   KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLV 182
           KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLV
Sbjct: 93  KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152

Query: 183 HAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPVTFAELKVK 362
           HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP  FAELKVK
Sbjct: 153 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVK 212

Query: 363 EIKNGRLAMFSMFGF 407
           E+KNGRLAMFSMFGF
Sbjct: 213 ELKNGRLAMFSMFGF 227


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