BLASTX nr result
ID: Dioscorea21_contig00006298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00006298
(1657 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519032.1| double-stranded RNA binding protein, putativ... 683 0.0
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma... 655 0.0
emb|CBI35690.3| unnamed protein product [Vitis vinifera] 655 0.0
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma... 647 0.0
ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma... 642 0.0
>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223541695|gb|EEF43243.1| double-stranded RNA binding
protein, putative [Ricinus communis]
Length = 978
Score = 683 bits (1762), Expect = 0.0
Identities = 352/554 (63%), Positives = 425/554 (76%), Gaps = 3/554 (0%)
Frame = -3
Query: 1655 GILAEIKRYQDDKSILKQYVENDQVVDNGKVYLVQPEIVPPLSDNHQLISRPVIRLQEKN 1476
G+L+E+KRYQDDK+ILKQYV+NDQVV+NG+V Q E+VP LSDNHQ I RP+IRLQE+N
Sbjct: 198 GMLSEVKRYQDDKTILKQYVDNDQVVENGRVIKTQFEVVPALSDNHQTIVRPLIRLQERN 257
Query: 1475 IILTRVNPAIRDTSVLVRLRPAWEDLRAYLTARGRKRFEVYVCTMAERDYAFEMWRLLDP 1296
IILTR+NP IRDTSVLVRLRPAWE+LR+YLTARGRKRFEVYVCTMAERDYA EMWRLLDP
Sbjct: 258 IILTRINPQIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 317
Query: 1295 ESNLISPRELLDRIVCVKSGSRKSLLNVFQDGICHPRMALVIDDRLKVWDEKDQPRVHVV 1116
ESNLI+ +ELLDRIVCVKSG RKSL NVFQDGICHP+MALVIDDRLKVWDEKDQPRVHVV
Sbjct: 318 ESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVV 377
Query: 1115 PAFAPYYAPQAEANSTIPVLCVARNVACNVRGGFFKEFDEGMLPRISNISYEDEMVDFPS 936
PAFAPYYAPQAEAN+ +PVLCVARNVACNVRGGFFKEFDEG+L RI IS+ED+M D PS
Sbjct: 378 PAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEFDEGLLQRIPEISFEDDMNDIPS 437
Query: 935 APDVSNYLVSEEDMTTLNGSKDPLCFEGITDAEVQRRLKDPTYTAQAVPPMFSSLDPRII 756
PDVSNYLV E+D T NG++DPL F+G+ DAEV++RLK+ + A P ++LD R++
Sbjct: 438 PPDVSNYLVPEDDAFTSNGNRDPLSFDGMADAEVEKRLKEAISISSAFPSTVANLDARLV 497
Query: 755 SSLQHVMASSGAVPLPTAQ-ILMSLPNSQSLQSIAVGKPLVQSILSEPSLQGSPAREEGE 579
LQ+ MASS ++P+PT+Q +++ P+ Q Q+ + KPL Q + SEPSLQ SPAREEGE
Sbjct: 498 PPLQYTMASSSSIPVPTSQPAVVTFPSMQLPQAAPLVKPLGQVVPSEPSLQSSPAREEGE 557
Query: 578 VPESELDPDTRRRLLILQHGQDNRELXXXXXXXXXXXXXXXXXXPLQVSGPPVQSRGNWL 399
VPESELDPDTRRRLLILQHGQD R+ +QVS P VQSRGNW+
Sbjct: 558 VPESELDPDTRRRLLILQHGQDLRD-----PAPSESPFPVRPSNSMQVSVPRVQSRGNWV 612
Query: 398 PYDEELSPKQRNRA-HKDFSLQPDNMRFSKKRSRLPSFSRNGPTGDNPSPQDRLLYDNQR 222
P +EE+SP+Q NRA ++F + + M K R PSF P ++ P +R+ ++NQR
Sbjct: 613 PVEEEMSPRQLNRAVTREFPMDTEPMHIDKHRPHHPSFF---PKVESSIPSERMPHENQR 669
Query: 221 LPLQAHRSDDRLRSNDPISNYNSYPGEEMPIGR-NPNHRDAQLEPGPAIMQYPETSAGVL 45
LP A DDRLR N +SNY S GEE + R + ++RD +E A+ ET VL
Sbjct: 670 LPKVAPYKDDRLRLNQTMSNYQSLSGEENSLSRSSSSNRDLDVESDRAVSS-AETPVRVL 728
Query: 44 QEIAVKCGAKVEYR 3
EI++KCGAKVE++
Sbjct: 729 HEISMKCGAKVEFK 742
>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Vitis vinifera]
Length = 860
Score = 655 bits (1690), Expect = 0.0
Identities = 344/524 (65%), Positives = 398/524 (75%), Gaps = 3/524 (0%)
Frame = -3
Query: 1655 GILAEIKRYQDDKSILKQYVENDQVVDNGKVYLVQPEIVPPLSDNHQLISRPVIRLQEKN 1476
G+ AE++RYQDD++ILKQY ENDQVV+NGK++ QPEIVP LSDNHQ I RP+IRLQEKN
Sbjct: 176 GMAAEVRRYQDDRNILKQYAENDQVVENGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKN 235
Query: 1475 IILTRVNPAIRDTSVLVRLRPAWEDLRAYLTARGRKRFEVYVCTMAERDYAFEMWRLLDP 1296
IILTR+NP IRDTSVLVRLRPAWEDLR+YLTARGRKRFEVYVCTMAERDYA EMWRLLDP
Sbjct: 236 IILTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 295
Query: 1295 ESNLISPRELLDRIVCVKSGSRKSLLNVFQDGICHPRMALVIDDRLKVWDEKDQPRVHVV 1116
ESNLI+ +ELLDRIVCVKSGSRKSL NVFQDGICHP+MALVIDDRLKVWDEKDQPRVHVV
Sbjct: 296 ESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVV 355
Query: 1115 PAFAPYYAPQAEANSTIPVLCVARNVACNVRGGFFKEFDEGMLPRISNISYEDEMVDFPS 936
PAFAPYYAPQAEAN+ I VLCVARNVACNVRGGFFKEFDEG+L RI ISYED++ D S
Sbjct: 356 PAFAPYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDDIKDIRS 415
Query: 935 APDVSNYLVSEEDMTTLNGSKDPLCFEGITDAEVQRRLKDPTYTAQAVPPMFSSLDPRII 756
APDVSNYLVSE+D + NG++D CF+G+ D EV+R+LKD A + P +SLDPR+
Sbjct: 416 APDVSNYLVSEDDASVSNGNRDQPCFDGMADVEVERKLKD----AISAPSTVTSLDPRLS 471
Query: 755 SSLQH-VMASSGAVPLPTAQ-ILMSLPNSQSLQSIAVGKPLVQSILSEPSLQGSPAREEG 582
LQ V ASSG P P AQ +M N Q QS ++ KPL EP++Q SPAREEG
Sbjct: 472 PPLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPLA----PEPTMQSSPAREEG 527
Query: 581 EVPESELDPDTRRRLLILQHGQDNRELXXXXXXXXXXXXXXXXXXPLQVSGPPVQSRGNW 402
EVPESELDPDTRRRLLILQHGQD RE P+QVS P VQSRG+W
Sbjct: 528 EVPESELDPDTRRRLLILQHGQDTRE-------HASSDPPFPVRPPIQVSVPRVQSRGSW 580
Query: 401 LPYDEELSPKQRNRA-HKDFSLQPDNMRFSKKRSRLPSFSRNGPTGDNPSPQDRLLYDNQ 225
P DEE+SP+Q NRA K+F L D M K R PSF ++ + DR+L++NQ
Sbjct: 581 FPADEEMSPRQLNRAVPKEFPLDSDTMHIEKHRPHHPSFFHK---VESSASSDRILHENQ 637
Query: 224 RLPLQAHRSDDRLRSNDPISNYNSYPGEEMPIGRNPNHRDAQLE 93
RL + DDRLR N + Y+S+ GEE+P+GR+ ++RD E
Sbjct: 638 RLSKEVLHRDDRLRLNHSLPGYHSFSGEEVPLGRSSSNRDLDFE 681
>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 655 bits (1690), Expect = 0.0
Identities = 344/524 (65%), Positives = 398/524 (75%), Gaps = 3/524 (0%)
Frame = -3
Query: 1655 GILAEIKRYQDDKSILKQYVENDQVVDNGKVYLVQPEIVPPLSDNHQLISRPVIRLQEKN 1476
G+ AE++RYQDD++ILKQY ENDQVV+NGK++ QPEIVP LSDNHQ I RP+IRLQEKN
Sbjct: 176 GMAAEVRRYQDDRNILKQYAENDQVVENGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKN 235
Query: 1475 IILTRVNPAIRDTSVLVRLRPAWEDLRAYLTARGRKRFEVYVCTMAERDYAFEMWRLLDP 1296
IILTR+NP IRDTSVLVRLRPAWEDLR+YLTARGRKRFEVYVCTMAERDYA EMWRLLDP
Sbjct: 236 IILTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 295
Query: 1295 ESNLISPRELLDRIVCVKSGSRKSLLNVFQDGICHPRMALVIDDRLKVWDEKDQPRVHVV 1116
ESNLI+ +ELLDRIVCVKSGSRKSL NVFQDGICHP+MALVIDDRLKVWDEKDQPRVHVV
Sbjct: 296 ESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVV 355
Query: 1115 PAFAPYYAPQAEANSTIPVLCVARNVACNVRGGFFKEFDEGMLPRISNISYEDEMVDFPS 936
PAFAPYYAPQAEAN+ I VLCVARNVACNVRGGFFKEFDEG+L RI ISYED++ D S
Sbjct: 356 PAFAPYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDDIKDIRS 415
Query: 935 APDVSNYLVSEEDMTTLNGSKDPLCFEGITDAEVQRRLKDPTYTAQAVPPMFSSLDPRII 756
APDVSNYLVSE+D + NG++D CF+G+ D EV+R+LKD A + P +SLDPR+
Sbjct: 416 APDVSNYLVSEDDASVSNGNRDQPCFDGMADVEVERKLKD----AISAPSTVTSLDPRLS 471
Query: 755 SSLQH-VMASSGAVPLPTAQ-ILMSLPNSQSLQSIAVGKPLVQSILSEPSLQGSPAREEG 582
LQ V ASSG P P AQ +M N Q QS ++ KPL EP++Q SPAREEG
Sbjct: 472 PPLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPLA----PEPTMQSSPAREEG 527
Query: 581 EVPESELDPDTRRRLLILQHGQDNRELXXXXXXXXXXXXXXXXXXPLQVSGPPVQSRGNW 402
EVPESELDPDTRRRLLILQHGQD RE P+QVS P VQSRG+W
Sbjct: 528 EVPESELDPDTRRRLLILQHGQDTRE-------HASSDPPFPVRPPIQVSVPRVQSRGSW 580
Query: 401 LPYDEELSPKQRNRA-HKDFSLQPDNMRFSKKRSRLPSFSRNGPTGDNPSPQDRLLYDNQ 225
P DEE+SP+Q NRA K+F L D M K R PSF ++ + DR+L++NQ
Sbjct: 581 FPADEEMSPRQLNRAVPKEFPLDSDTMHIEKHRPHHPSFFHK---VESSASSDRILHENQ 637
Query: 224 RLPLQAHRSDDRLRSNDPISNYNSYPGEEMPIGRNPNHRDAQLE 93
RL + DDRLR N + Y+S+ GEE+P+GR+ ++RD E
Sbjct: 638 RLSKEVLHRDDRLRLNHSLPGYHSFSGEEVPLGRSSSNRDLDFE 681
>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Glycine max]
Length = 954
Score = 647 bits (1669), Expect = 0.0
Identities = 340/555 (61%), Positives = 415/555 (74%), Gaps = 5/555 (0%)
Frame = -3
Query: 1655 GILAEIKRYQDDKSILKQYVENDQVVDNGKVYLVQPEIVPPLSDNHQLISRPVIRLQEKN 1476
G+ AE+KRYQDDK+ILKQY ENDQVVDNG+V VQ EIVP LSD+HQ I RP+IRLQ+KN
Sbjct: 175 GMQAEVKRYQDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKN 234
Query: 1475 IILTRVNPAIRDTSVLVRLRPAWEDLRAYLTARGRKRFEVYVCTMAERDYAFEMWRLLDP 1296
IILTR+NP IRDTSVLVRLRPAWEDLR+YLTARGRKRFEVYVCTMAERDYA EMWRLLDP
Sbjct: 235 IILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 294
Query: 1295 ESNLISPRELLDRIVCVKSGSRKSLLNVFQDGICHPRMALVIDDRLKVWDEKDQPRVHVV 1116
+SNLI+ +ELL RIVCVKSG +KSL NVFQDG+CHP+MALVIDDRLKVWDEKDQPRVHVV
Sbjct: 295 DSNLINSKELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHVV 354
Query: 1115 PAFAPYYAPQAEANSTIPVLCVARNVACNVRGGFFKEFDEGMLPRISNISYEDEMVDFPS 936
PAFAPYYAPQAEA++TIPVLCVARNVACNVRGGFFK+FD+G+L +I I+YED++ D PS
Sbjct: 355 PAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPS 414
Query: 935 APDVSNYLVSEEDMTTLNGSKDPLCFEGITDAEVQRRLKDPTYTAQAVPPMFSSLDPRII 756
PDVSNYLVSE+D + NG +DP F+G+ DAEV+R+LKD A +P ++LDPR +
Sbjct: 415 PPDVSNYLVSEDDGSISNGHRDPFLFDGMADAEVERKLKDALSAASTIPVTTANLDPR-L 473
Query: 755 SSLQHVMASSGAVPLPTAQI-LMSLPNSQSLQSIAVGKPLVQSILSEPSLQGSPAREEGE 579
+SLQ+ M SG+VP PTAQ +M P+ Q Q + KP+ Q+ SEPSL SPAREEGE
Sbjct: 474 TSLQYTMVPSGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSEPSLHSSPAREEGE 533
Query: 578 VPESELDPDTRRRLLILQHGQDNRELXXXXXXXXXXXXXXXXXXPLQVSGPPV-QSRGNW 402
VPESELDPDTRRRLLILQHGQD R+ P+Q S P V SRG W
Sbjct: 534 VPESELDPDTRRRLLILQHGQDTRD-------HASAEPPFPVRHPVQTSAPHVPSSRGVW 586
Query: 401 LPYDEELSPKQRNR-AHKDFSLQPDNMRFSKKRSRLPSFSRNGPTGDNPSPQDRLLYD-N 228
P +EE+ + NR K+F + + +K R PSF ++ DR+L+D +
Sbjct: 587 FPAEEEIGSQPLNRVVPKEFPVDSGPLGIAKPRPHHPSFFSK---VESSISSDRILHDSH 643
Query: 227 QRLPLQAHRSDDRLRSNDPISNYNSYPGEEMPIGRN-PNHRDAQLEPGPAIMQYPETSAG 51
QRLP + + DDR R N +S+Y S+ G+++P R+ +HRD E G +++ + +T
Sbjct: 644 QRLPKEMYHRDDRPRLNHMLSSYRSFSGDDIPFSRSFSSHRDLDSESGHSVL-HADTPVA 702
Query: 50 VLQEIAVKCGAKVEY 6
VLQEIA+KCG KV++
Sbjct: 703 VLQEIALKCGTKVDF 717
>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Cucumis sativus] gi|449479317|ref|XP_004155567.1|
PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II
C-terminal domain phosphatase-like 1-like [Cucumis
sativus]
Length = 803
Score = 642 bits (1656), Expect = 0.0
Identities = 348/561 (62%), Positives = 412/561 (73%), Gaps = 10/561 (1%)
Frame = -3
Query: 1655 GILAEIKRYQDDKSILKQYVENDQVVDNGKVYLVQPEIVPPLSDNHQLISRPVIRLQEKN 1476
G+LAE+KRYQDDK ILKQY ENDQV++NGKV Q E+VP LSDNHQ + RP+IRL EKN
Sbjct: 179 GMLAEVKRYQDDKIILKQYAENDQVIENGKVIKSQSEVVPALSDNHQPVVRPLIRLHEKN 238
Query: 1475 IILTRVNPAIRDTSVLVRLRPAWEDLRAYLTARGRKRFEVYVCTMAERDYAFEMWRLLDP 1296
IILTR+NP IRDTSVLVRLRPAWEDLR+YLTARGRKRFEVYVCTMAERDYA EMWRLLDP
Sbjct: 239 IILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 298
Query: 1295 ESNLISPRELLDRIVCVKSGSRKSLLNVFQDGICHPRMALVIDDRLKVWDEKDQPRVHVV 1116
+SNLI+P+ELLDRIVCVKSGSRKSL NVFQDG CHP+MALVIDDRLKVWDEKDQPRVHVV
Sbjct: 299 DSNLINPKELLDRIVCVKSGSRKSLFNVFQDGFCHPKMALVIDDRLKVWDEKDQPRVHVV 358
Query: 1115 PAFAPYYAPQAEANSTIPVLCVARNVACNVRGGFFKEFDEGMLPRISNISYEDEMVDFPS 936
PAFAPYYAP AE N+ IPVLCVARNVACNVRGGFFKEFD+ +L +IS+ISYED++ D PS
Sbjct: 359 PAFAPYYAPNAEGNNAIPVLCVARNVACNVRGGFFKEFDDILLQKISDISYEDDVNDIPS 418
Query: 935 APDVSNYLVSEEDMTTLNGSKDPLCFEGITDAEVQRRLKDPTYTAQAVPPMFSSLDPRII 756
PDVSNYLVSE++ + NG+KD F+G+ D EV RR+KD + + +S DPR +
Sbjct: 419 PPDVSNYLVSEDEYSIANGNKDMPTFDGMPDMEVDRRMKDAFLASSTI----NSADPR-V 473
Query: 755 SSLQHVMAS-SGAVPLPTAQIL------MSLPNSQSLQSIAVGKPLVQSILSEPSLQGSP 597
SSLQ+ MAS S +VPLP Q+ M LP+ S+ +A +EPSLQ SP
Sbjct: 474 SSLQYTMASASCSVPLPPKQVTMPYFPNMPLPHVNSVAHVAP---------NEPSLQSSP 524
Query: 596 AREEGEVPESELDPDTRRRLLILQHGQDNRELXXXXXXXXXXXXXXXXXXPLQVSGPPVQ 417
AREEGEVPESELDPDTRRRLLILQHGQD RE QV+ P Q
Sbjct: 525 AREEGEVPESELDPDTRRRLLILQHGQDTRE-----RLSSEPAFPARPPPLQQVAAPRAQ 579
Query: 416 SRGNWLPYDEELSPKQRNR-AHKDFSLQPDNMRFSKK-RSRLPSFSRNGPTGDNPSPQDR 243
SRGNW P +EE+SP+Q NR A KDF + + M +K RS PSF DN DR
Sbjct: 580 SRGNWSPMEEEMSPRQLNRSARKDFPVDAEPMPMREKHRSNHPSFFAK---VDNSILPDR 636
Query: 242 LLYDNQRLPLQAHRSDDRLRSNDPISNYNSYPGEEMPIGRNPNH-RDAQLEPGPAIMQYP 66
+ +DNQRLP +A DDR+R + S+Y ++ GEE+P+ ++ + RD +E G +I +
Sbjct: 637 IPHDNQRLPKEAFYRDDRMRVSRRPSSYPAFSGEEIPMNQSSSRSRDDDIESGRSI--WS 694
Query: 65 ETSAGVLQEIAVKCGAKVEYR 3
ET G LQEIA+K G KVE++
Sbjct: 695 ETPVGALQEIAMKFGTKVEFK 715