BLASTX nr result

ID: Dioscorea21_contig00006289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006289
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537293.1| PREDICTED: 60S ribosomal protein L12-like [G...   273   3e-71
ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus...   271   1e-70
ref|XP_003542515.1| PREDICTED: 60S ribosomal protein L12-like [G...   270   2e-70
ref|NP_001240945.1| uncharacterized protein LOC100811654 [Glycin...   270   4e-70
gb|ADR71265.1| 60S ribosomal protein L12A [Hevea brasiliensis]        267   2e-69

>ref|XP_003537293.1| PREDICTED: 60S ribosomal protein L12-like [Glycine max]
          Length = 166

 Score =  273 bits (699), Expect = 3e-71
 Identities = 138/144 (95%), Positives = 143/144 (99%)
 Frame = -3

Query: 819 GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALV 640
           GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALV
Sbjct: 23  GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVTVVPSAAALV 82

Query: 639 IKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPRSMAKDLSGTIKEILGTCVSVGC 460
           IKALKEPERDRKKTKNIKHSGNISLDDV+EIAR+MSPRSMAKDLSGTIKEILGTCVSVGC
Sbjct: 83  IKALKEPERDRKKTKNIKHSGNISLDDVVEIARVMSPRSMAKDLSGTIKEILGTCVSVGC 142

Query: 459 TVDGKDPKDLQTEITEGDVEVPLE 388
           TVDGKDPKDLQ EI++GDVEVPLE
Sbjct: 143 TVDGKDPKDLQQEISDGDVEVPLE 166


>ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223530177|gb|EEF32086.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  271 bits (693), Expect = 1e-70
 Identities = 136/144 (94%), Positives = 142/144 (98%)
 Frame = -3

Query: 819 GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALV 640
           GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALV
Sbjct: 23  GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVTVVPSAAALV 82

Query: 639 IKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPRSMAKDLSGTIKEILGTCVSVGC 460
           IKALKEPERDRKKTKNIKHSGNISLDDVIEIA++M PRSMAKDLSGT+KEILGTCVSVGC
Sbjct: 83  IKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMKPRSMAKDLSGTVKEILGTCVSVGC 142

Query: 459 TVDGKDPKDLQTEITEGDVEVPLE 388
           TVDGKDPKDLQ EIT+GDVEVPL+
Sbjct: 143 TVDGKDPKDLQQEITDGDVEVPLD 166


>ref|XP_003542515.1| PREDICTED: 60S ribosomal protein L12-like [Glycine max]
          Length = 166

 Score =  270 bits (691), Expect = 2e-70
 Identities = 136/143 (95%), Positives = 142/143 (99%)
 Frame = -3

Query: 819 GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALV 640
           GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALV
Sbjct: 23  GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVTVVPSAAALV 82

Query: 639 IKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPRSMAKDLSGTIKEILGTCVSVGC 460
           IKALKEPERDRKKTKNIKH+GNISLDDV+EIAR+MSPRSMAKDLSGTIKEILGTCVSVGC
Sbjct: 83  IKALKEPERDRKKTKNIKHNGNISLDDVVEIARVMSPRSMAKDLSGTIKEILGTCVSVGC 142

Query: 459 TVDGKDPKDLQTEITEGDVEVPL 391
           TVDGKDPKDLQ EI++GDVEVPL
Sbjct: 143 TVDGKDPKDLQQEISDGDVEVPL 165


>ref|NP_001240945.1| uncharacterized protein LOC100811654 [Glycine max]
           gi|255647178|gb|ACU24057.1| unknown [Glycine max]
          Length = 166

 Score =  270 bits (689), Expect = 4e-70
 Identities = 136/144 (94%), Positives = 142/144 (98%)
 Frame = -3

Query: 819 GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALV 640
           GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALV
Sbjct: 23  GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVTVVPSAAALV 82

Query: 639 IKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPRSMAKDLSGTIKEILGTCVSVGC 460
           IKALKEPERDRKKTKNIKH+GNISLDDVIEIAR+M PRSMAKDLSG+IKEILGTCVSVGC
Sbjct: 83  IKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPRSMAKDLSGSIKEILGTCVSVGC 142

Query: 459 TVDGKDPKDLQTEITEGDVEVPLE 388
           TVDGKDPKDLQ EIT+GDVEVPL+
Sbjct: 143 TVDGKDPKDLQQEITDGDVEVPLD 166


>gb|ADR71265.1| 60S ribosomal protein L12A [Hevea brasiliensis]
          Length = 166

 Score =  267 bits (683), Expect = 2e-69
 Identities = 134/144 (93%), Positives = 142/144 (98%)
 Frame = -3

Query: 819 GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALV 640
           GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALV
Sbjct: 23  GAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVTVVPSAAALV 82

Query: 639 IKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPRSMAKDLSGTIKEILGTCVSVGC 460
           IKALKEPERDRKKTKNIKHSGNISLDDVIEIA++M PRSMAKDLSGT+KEILGTCVSVGC
Sbjct: 83  IKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGC 142

Query: 459 TVDGKDPKDLQTEITEGDVEVPLE 388
           TVDGK+PKDLQ EIT+G+VEVPL+
Sbjct: 143 TVDGKNPKDLQQEITDGEVEVPLD 166


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