BLASTX nr result

ID: Dioscorea21_contig00006276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006276
         (1752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 6...   322   2e-85
emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]   314   5e-83
emb|CBI25354.3| unnamed protein product [Vitis vinifera]              313   7e-83
ref|XP_002325928.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-74
ref|XP_004147826.1| PREDICTED: U-box domain-containing protein 6...   285   4e-74

>ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 62-like [Vitis vinifera]
          Length = 441

 Score =  322 bits (826), Expect = 2e-85
 Identities = 202/446 (45%), Positives = 246/446 (55%), Gaps = 49/446 (10%)
 Frame = -2

Query: 1577 MASKELDLAHPRTMDNGLSSRIGFQDPALQFPRAAGNHTADDRS---------------- 1446
            MAS+E+    P+ ++NGL+S++ FQD AL+F   A      D                  
Sbjct: 1    MASEEVGFVPPQRLENGLNSQLVFQDEALRFNCGAPQRRVGDPGPKTRELSSFIDEKMFC 60

Query: 1445 ----------GGFFRMG-----QESRLQNRDWN------------SIRDPXXXXXXXXXX 1347
                      GG FR          R   R+WN            S  +           
Sbjct: 61   VERDRYFHPQGGEFRRSIYGDAPPERPDGRNWNGNGNTPTPSGEGSEGEEDDDEEEEDDD 120

Query: 1346 XXXXXXXXXXXGLVSVDNGNHKHCNNXXXXXXXXSDKACNARADSQKQHSCFGLNRGMVA 1167
                       GLV+VD+ N K  N+        +DK  N +A   K HS FG NR ++ 
Sbjct: 121  DEVDEGDGEVEGLVAVDDAN-KSNNHSSGSLHSSADKIGNGKA---KDHSSFGSNRDVLM 176

Query: 1166 KDXXXXXXXXXXXXXXXXXXXXG----YDNEITIVEPEN--YYTPIMHGGDGSSLGHKEI 1005
            KD                    G    Y N +TI EP+   YY+  + G +GS+ G KE+
Sbjct: 177  KDGAIVLSTNSARASPSENHRQGRISHYQNAVTIAEPDGDMYYSQFLQGPEGSAPGQKEL 236

Query: 1004 XXXXXXXXXGRRESGLAIDLGESLRTHLSDPVTGALMDDAMILPCGHSFGSGGMQQVYRM 825
                     GR++  L+ + GESL+  LSDP+TGALMDDAMILPCGHSFG GGMQ V +M
Sbjct: 237  AVENGCGFSGRKDVSLSTESGESLKAILSDPLTGALMDDAMILPCGHSFGGGGMQHVIKM 296

Query: 824  KSCFKCSQPISEDLVRPNLALRAAVQAFHREEESQFSKAPKRRRDRFEHEKCSYDDPFPL 645
            K+C  CSQP SED V+PNL+LRAAVQAF REEE Q  +  KRRR+R + +KCSY D   +
Sbjct: 297  KACSTCSQPFSEDSVQPNLSLRAAVQAFRREEELQVYRTSKRRRERSDQDKCSYGDSTLM 356

Query: 644  DLSRGKGVQFPFVVSDRVIIKGNKRTPQRFVGRVAVVTTQCLNGWYVVKTLDNAESVKLQ 465
            D  RG+GVQFPF V+DRVIIKGNKRTPQRFVGR AVVTTQCLNGWYVVKTLDNAESVKLQ
Sbjct: 357  DTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQ 416

Query: 464  YRSLAKFTDELSSNVSSNKAITPNWL 387
            YRSLAK  D  SS    +K +TPNWL
Sbjct: 417  YRSLAKVPDNPSSKPMLSK-MTPNWL 441


>emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]
          Length = 452

 Score =  314 bits (804), Expect = 5e-83
 Identities = 202/457 (44%), Positives = 246/457 (53%), Gaps = 60/457 (13%)
 Frame = -2

Query: 1577 MASKELDLAHPRTMDNGLSSRIGFQDPALQFPRAAGNHTADDRS---------------- 1446
            MAS+E+    P+ ++NGL+S++ FQD AL+F   A      D                  
Sbjct: 1    MASEEVGFVPPQRLENGLNSQLVFQDEALRFNCGAPQRRVGDPGPKTRELSSFIDEKMFC 60

Query: 1445 ----------GGFFRMG-----QESRLQNRDWN------------SIRDPXXXXXXXXXX 1347
                      GG FR          R   R+WN            S  +           
Sbjct: 61   VERDRYFHPQGGEFRRSIYGDAPPERPDGRNWNGNGNTPTPSGEGSEGEEDDDEEEEDDD 120

Query: 1346 XXXXXXXXXXXGLVSVDNGNHKHCNNXXXXXXXXSDKACNARADSQKQHSCFGLNRGMVA 1167
                       GLV+VD+ N K  N+        +DK  N +A   K HS FG NR ++ 
Sbjct: 121  DEVDEGDGEVEGLVAVDDAN-KSNNHSSGSLHSSADKIGNGKA---KDHSSFGSNRDVLM 176

Query: 1166 KDXXXXXXXXXXXXXXXXXXXXG----YDNEITIVEPEN--YYTPIMHGGDGSSLGHKEI 1005
            KD                    G    Y N +TI EP+   YY+  + G +GS+ G KE+
Sbjct: 177  KDGAIVLSTNSARASPSENHRQGRISHYQNAVTIAEPDGDMYYSQFLQGPEGSAPGQKEL 236

Query: 1004 XXXXXXXXXGRRESGLAIDLGESLRTHLSDPVTGALMDDAMILPCGHSFGSGGMQQVYRM 825
                     GR++  L+ + GESL+  LSDP+TGALMDDAMILPCGHSFG GGMQ V +M
Sbjct: 237  AVENGCGFSGRKDVSLSTESGESLKAILSDPLTGALMDDAMILPCGHSFGGGGMQHVIKM 296

Query: 824  KSCFKCSQPISEDLVRPNLALRAAVQAFHREEESQFSKAPKRRRDRFEHEKCSYDDPFPL 645
            K+C  CSQP SED V+PNL+LRAAVQAF REEE Q  +  KRRR+R + +KCSY D   +
Sbjct: 297  KACSTCSQPFSEDSVQPNLSLRAAVQAFRREEELQVYRTSKRRRERSDQDKCSYGDSTLM 356

Query: 644  DLSRGKGVQFPFVVSDRVIIK-----------GNKRTPQRFVGRVAVVTTQCLNGWYVVK 498
            D  RG+GVQFPF V+DRVIIK           GNKRTPQRFVGR AVVTTQCLNGWYVVK
Sbjct: 357  DTPRGRGVQFPFAVTDRVIIKLQLTIREKMDQGNKRTPQRFVGREAVVTTQCLNGWYVVK 416

Query: 497  TLDNAESVKLQYRSLAKFTDELSSNVSSNKAITPNWL 387
            TLDNAESVKLQYRSLAK  D  SS    +K +TPNWL
Sbjct: 417  TLDNAESVKLQYRSLAKVPDNPSSKPMLSK-MTPNWL 452


>emb|CBI25354.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  313 bits (803), Expect = 7e-83
 Identities = 175/314 (55%), Positives = 208/314 (66%), Gaps = 6/314 (1%)
 Frame = -2

Query: 1310 LVSVDNGNHKHCNNXXXXXXXXSDKACNARADSQKQHSCFGLNRGMVAKDXXXXXXXXXX 1131
            LV+VD+ N K  N+        +DK  N +A   K HS FG NR ++ KD          
Sbjct: 76   LVAVDDAN-KSNNHSSGSLHSSADKIGNGKA---KDHSSFGSNRDVLMKDGAIVLSTNSA 131

Query: 1130 XXXXXXXXXXG----YDNEITIVEPEN--YYTPIMHGGDGSSLGHKEIXXXXXXXXXGRR 969
                      G    Y N +TI EP+   YY+  + G +GS+ G KE+         GR+
Sbjct: 132  RASPSENHRQGRISHYQNAVTIAEPDGDMYYSQFLQGPEGSAPGQKELAVENGCGFSGRK 191

Query: 968  ESGLAIDLGESLRTHLSDPVTGALMDDAMILPCGHSFGSGGMQQVYRMKSCFKCSQPISE 789
            +  L+ + GESL+  LSDP+TGALMDDAMILPCGHSFG GGMQ V +MK+C  CSQP SE
Sbjct: 192  DVSLSTESGESLKAILSDPLTGALMDDAMILPCGHSFGGGGMQHVIKMKACSTCSQPFSE 251

Query: 788  DLVRPNLALRAAVQAFHREEESQFSKAPKRRRDRFEHEKCSYDDPFPLDLSRGKGVQFPF 609
            D V+PNL+LRAAVQAF REEE Q  +  KRRR+R + +KCSY D   +D  RG+GVQFPF
Sbjct: 252  DSVQPNLSLRAAVQAFRREEELQVYRTSKRRRERSDQDKCSYGDSTLMDTPRGRGVQFPF 311

Query: 608  VVSDRVIIKGNKRTPQRFVGRVAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKFTDELS 429
             V+DRVIIKGNKRTPQRFVGR AVVTTQCLNGWYVVKTLDNAESVKLQYRSLAK  D  S
Sbjct: 312  AVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPDNPS 371

Query: 428  SNVSSNKAITPNWL 387
            S    +K +TPNWL
Sbjct: 372  SKPMLSK-MTPNWL 384


>ref|XP_002325928.1| predicted protein [Populus trichocarpa] gi|222862803|gb|EEF00310.1|
            predicted protein [Populus trichocarpa]
          Length = 226

 Score =  286 bits (732), Expect = 1e-74
 Identities = 148/226 (65%), Positives = 171/226 (75%), Gaps = 1/226 (0%)
 Frame = -2

Query: 1061 YYTPIMHGGDGSSLGHKEIXXXXXXXXXGRRE-SGLAIDLGESLRTHLSDPVTGALMDDA 885
            YY+  + G  GS  G K++         GR++ S  + + G+SLR  LSDPVTGALMDDA
Sbjct: 2    YYSQYLQGTGGSGAGGKDMCVENGCGFSGRKDVSAFSSESGDSLRAILSDPVTGALMDDA 61

Query: 884  MILPCGHSFGSGGMQQVYRMKSCFKCSQPISEDLVRPNLALRAAVQAFHREEESQFSKAP 705
            MILPCGHSFG+GGMQ V RMK C+ CSQ ISED + PNL+LR AVQAF REEE QF ++ 
Sbjct: 62   MILPCGHSFGAGGMQHVIRMKVCYSCSQSISEDSIAPNLSLRYAVQAFQREEELQFYRSS 121

Query: 704  KRRRDRFEHEKCSYDDPFPLDLSRGKGVQFPFVVSDRVIIKGNKRTPQRFVGRVAVVTTQ 525
            KRRR+RF+ +K  Y D   +D  RG+GVQFPF V+DRVIIKGNKRTPQRFVGR AVVTTQ
Sbjct: 122  KRRRERFDQDKGGYGDSGVMDPPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ 181

Query: 524  CLNGWYVVKTLDNAESVKLQYRSLAKFTDELSSNVSSNKAITPNWL 387
            CLNGWYVVKTLDNAESVKLQYRSLAK +D+ SS   S K I PNWL
Sbjct: 182  CLNGWYVVKTLDNAESVKLQYRSLAKLSDDPSSKTISTK-IAPNWL 226


>ref|XP_004147826.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis sativus]
            gi|449476988|ref|XP_004154895.1| PREDICTED: U-box
            domain-containing protein 62-like [Cucumis sativus]
          Length = 429

 Score =  285 bits (728), Expect = 4e-74
 Identities = 144/239 (60%), Positives = 180/239 (75%), Gaps = 2/239 (0%)
 Frame = -2

Query: 1097 YDNEITIVEPEN--YYTPIMHGGDGSSLGHKEIXXXXXXXXXGRRESGLAIDLGESLRTH 924
            Y N +T+ EP++  YY+  +   +GS+ G K +          RR+   + + GESLR+ 
Sbjct: 193  YPNAVTVAEPDSEAYYSQYLQSNEGSASGQKNLSMENGCGFG-RRDVSFSGEPGESLRSI 251

Query: 923  LSDPVTGALMDDAMILPCGHSFGSGGMQQVYRMKSCFKCSQPISEDLVRPNLALRAAVQA 744
            L+DPVTGALM+DAMILPCGHSFGSGG+Q V +++SC+ CSQ +SED +  NL+L+AAVQA
Sbjct: 252  LTDPVTGALMNDAMILPCGHSFGSGGIQHVLKVRSCYSCSQSVSEDSIAQNLSLQAAVQA 311

Query: 743  FHREEESQFSKAPKRRRDRFEHEKCSYDDPFPLDLSRGKGVQFPFVVSDRVIIKGNKRTP 564
            F REEE  F ++PKRRR+RFE +K  Y D   +D  RG+GVQFPF V+DRVIIKGNKRTP
Sbjct: 312  FCREEELLFHRSPKRRRERFEQDKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTP 371

Query: 563  QRFVGRVAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKFTDELSSNVSSNKAITPNWL 387
            QRFVGR AVVTTQCLNGWYVVKTLDNAESVKLQYRSLAK  ++ ++   + K ITPNWL
Sbjct: 372  QRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDATTKTITRK-ITPNWL 429


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