BLASTX nr result

ID: Dioscorea21_contig00006264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006264
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAF05902.1| zinc finger protein [Oryza sativa Japonica Group...    91   4e-16
ref|NP_001061042.1| Os08g0159500 [Oryza sativa Japonica Group] g...    91   4e-16
ref|XP_002445097.1| hypothetical protein SORBIDRAFT_07g004050 [S...    90   6e-16
gb|AEO35907.1| hypothetical protein [Amblyomma maculatum]              89   1e-15
gb|AAS13688.1| zinc finger protein LSD1 [Oryza sativa Japonica G...    88   2e-15

>emb|CAF05902.1| zinc finger protein [Oryza sativa Japonica Group]
           gi|215767175|dbj|BAG99403.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218200506|gb|EEC82933.1| hypothetical protein
           OsI_27897 [Oryza sativa Indica Group]
           gi|222639951|gb|EEE68083.1| hypothetical protein
           OsJ_26122 [Oryza sativa Japonica Group]
          Length = 143

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 40/44 (90%), Positives = 42/44 (95%)
 Frame = -1

Query: 306 NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSIGAFPSTEQK 175
           NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTS+GA P T+QK
Sbjct: 97  NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASPGTDQK 140



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = -3

Query: 580 GNQSHLVCSGCRNLLLYPVGATSVCCAVCSVITTVPPPGTEMA 452
           G QS LVCSGCRNLL+YP GATSVCCAVCS +T VP PGTEMA
Sbjct: 20  GAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMA 62


>ref|NP_001061042.1| Os08g0159500 [Oryza sativa Japonica Group]
           gi|122222103|sp|Q0J7V9.1|LSD1_ORYSJ RecName:
           Full=Protein LSD1; AltName: Full=Protein LESION
           SIMULATING DISEASE 1; Short=OsLSD1; AltName:
           Full=Putative zinc finger LSD1
           gi|113623011|dbj|BAF22956.1| Os08g0159500 [Oryza sativa
           Japonica Group] gi|215767174|dbj|BAG99402.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 184

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 40/44 (90%), Positives = 42/44 (95%)
 Frame = -1

Query: 306 NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSIGAFPSTEQK 175
           NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTS+GA P T+QK
Sbjct: 138 NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASPGTDQK 181



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = -3

Query: 580 GNQSHLVCSGCRNLLLYPVGATSVCCAVCSVITTVPPPGTEMA 452
           G QS LVCSGCRNLL+YP GATSVCCAVCS +T VP PGTEMA
Sbjct: 61  GAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMA 103


>ref|XP_002445097.1| hypothetical protein SORBIDRAFT_07g004050 [Sorghum bicolor]
           gi|241941447|gb|EES14592.1| hypothetical protein
           SORBIDRAFT_07g004050 [Sorghum bicolor]
          Length = 143

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -1

Query: 306 NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSIGAFPSTEQK 175
           NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTS+GA P  EQK
Sbjct: 97  NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASPGAEQK 140



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = -3

Query: 580 GNQSHLVCSGCRNLLLYPVGATSVCCAVCSVITTVPPPGTEMA 452
           G QS LVC+GCRNLL+YP GATSVCCAVCS +T VP PGTEMA
Sbjct: 20  GAQSQLVCTGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMA 62


>gb|AEO35907.1| hypothetical protein [Amblyomma maculatum]
          Length = 107

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = -1

Query: 306 NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSIGAFPSTEQK 175
           NQVAHVNCGNCR LLMYQYGARSVKCAVCNFVTSIGA PS EQK
Sbjct: 61  NQVAHVNCGNCRTLLMYQYGARSVKCAVCNFVTSIGAAPSIEQK 104



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 31/43 (72%), Positives = 34/43 (79%)
 Frame = -3

Query: 580 GNQSHLVCSGCRNLLLYPVGATSVCCAVCSVITTVPPPGTEMA 452
           G QS LVCSGCRNLLLYP GA SVCCAVCS +T  PPP  ++A
Sbjct: 22  GAQSQLVCSGCRNLLLYPQGALSVCCAVCSSVTAAPPPANQVA 64


>gb|AAS13688.1| zinc finger protein LSD1 [Oryza sativa Japonica Group]
          Length = 143

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -1

Query: 306 NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSIGAFPSTEQK 175
           NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTS+GA P  +QK
Sbjct: 97  NQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASPGIDQK 140



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = -3

Query: 580 GNQSHLVCSGCRNLLLYPVGATSVCCAVCSVITTVPPPGTEMA 452
           G QS LVCSGCRNLL+YP GATSVCCAVCS +T VP PGTEMA
Sbjct: 20  GAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMA 62


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