BLASTX nr result

ID: Dioscorea21_contig00006246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006246
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546871.1| PREDICTED: 60S ribosomal protein L6-like [Gl...   290   5e-76
ref|XP_002313280.1| predicted protein [Populus trichocarpa] gi|1...   289   8e-76
ref|XP_003531428.1| PREDICTED: 60S ribosomal protein L6-like [Gl...   288   2e-75
gb|AFK47926.1| unknown [Medicago truncatula]                          287   3e-75
gb|ACJ84110.1| unknown [Medicago truncatula]                          287   3e-75

>ref|XP_003546871.1| PREDICTED: 60S ribosomal protein L6-like [Glycine max]
          Length = 232

 Score =  290 bits (741), Expect = 5e-76
 Identities = 152/234 (64%), Positives = 166/234 (70%)
 Frame = +1

Query: 79  MAPKENKPRTVSRNPDLIRGIGKFSKSRMYHKRGIWAIKAKNGGXXXXXXXXXXXXXXXX 258
           MAPK  KPRT +RNPDL+RGIGK+S+S+MYHKRGIWAIKAKNGG                
Sbjct: 1   MAPK--KPRTTTRNPDLVRGIGKYSRSQMYHKRGIWAIKAKNGGVLPRHDPKPKPEAPAQ 58

Query: 259 XXXXXXXXDDVKKPIANRRKPKPTKLRASITPGTVLILLVGRFMGKRVVFLKQLPSGLLL 438
                   DDVKKP+ N+ KPKP KLRASITPGTVLILL GRF GKRVVFLKQLPSGLLL
Sbjct: 59  KPPKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL 118

Query: 439 VTGPFKVNGVPLRRVNQSYVIGTSTKIDISGVNVDXXXXXXXXXXXXXXXXXXXXXXXXX 618
           VTGPFK+NGVPLRRVNQSYVIGTSTK+DISGVNVD                         
Sbjct: 119 VTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEAKKKKTKGEGEFFEA 178

Query: 619 XXXXXXXLPQEKKDDQKAVDAQLIKAIEAVPDLKAYLGARFSLRSGMKPHELVF 780
                  LPQEKKDDQK VD  L+KAIE VPDLK+YLGARFSL++G+KPHELVF
Sbjct: 179 EKEEKNVLPQEKKDDQKTVDTTLLKAIENVPDLKSYLGARFSLKAGVKPHELVF 232


>ref|XP_002313280.1| predicted protein [Populus trichocarpa] gi|118482298|gb|ABK93076.1|
           unknown [Populus trichocarpa]
           gi|222849688|gb|EEE87235.1| predicted protein [Populus
           trichocarpa]
          Length = 232

 Score =  289 bits (739), Expect = 8e-76
 Identities = 153/234 (65%), Positives = 167/234 (71%)
 Frame = +1

Query: 79  MAPKENKPRTVSRNPDLIRGIGKFSKSRMYHKRGIWAIKAKNGGXXXXXXXXXXXXXXXX 258
           MAP+  K   VSRNPDL+RGIGK+S+S+MYHKRG+WAIKAKNGG                
Sbjct: 1   MAPR--KTPQVSRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHAPKVKDAAPAE 58

Query: 259 XXXXXXXXDDVKKPIANRRKPKPTKLRASITPGTVLILLVGRFMGKRVVFLKQLPSGLLL 438
                   DDVKKP+ NRRKPKPTKLR SITPGTVLI+LVGRF GKRVVFLKQLPSGLLL
Sbjct: 59  KPPKFYPADDVKKPLPNRRKPKPTKLRDSITPGTVLIILVGRFKGKRVVFLKQLPSGLLL 118

Query: 439 VTGPFKVNGVPLRRVNQSYVIGTSTKIDISGVNVDXXXXXXXXXXXXXXXXXXXXXXXXX 618
           VTGPFK+NGVPLRRVNQSYVIGTSTK+DISGVNV+                         
Sbjct: 119 VTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVEKFDDKYFGKKAEKKKKKGEGNFFEA 178

Query: 619 XXXXXXXLPQEKKDDQKAVDAQLIKAIEAVPDLKAYLGARFSLRSGMKPHELVF 780
                  LPQEKKDDQKAVDA LIK++E VPDLKAYLGARFSL+ GMKPHELVF
Sbjct: 179 DKEGENALPQEKKDDQKAVDAPLIKSLECVPDLKAYLGARFSLKDGMKPHELVF 232


>ref|XP_003531428.1| PREDICTED: 60S ribosomal protein L6-like [Glycine max]
          Length = 232

 Score =  288 bits (736), Expect = 2e-75
 Identities = 151/234 (64%), Positives = 166/234 (70%)
 Frame = +1

Query: 79  MAPKENKPRTVSRNPDLIRGIGKFSKSRMYHKRGIWAIKAKNGGXXXXXXXXXXXXXXXX 258
           MAPK  KPRT SRNPDL+RGIGK+S+S+MYHKRGIWAIKAKNGG                
Sbjct: 1   MAPK--KPRTTSRNPDLVRGIGKYSRSQMYHKRGIWAIKAKNGGVLPLHDPKPKPEAPAQ 58

Query: 259 XXXXXXXXDDVKKPIANRRKPKPTKLRASITPGTVLILLVGRFMGKRVVFLKQLPSGLLL 438
                   DDVKKP+ N+ KPKP KLRASITPGTVLILL GRF GKRVVFLKQLPSGLLL
Sbjct: 59  KPPKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL 118

Query: 439 VTGPFKVNGVPLRRVNQSYVIGTSTKIDISGVNVDXXXXXXXXXXXXXXXXXXXXXXXXX 618
           VTGPFK+NGVPLRRVNQSYVIGTSTK+DIS VNVD                         
Sbjct: 119 VTGPFKINGVPLRRVNQSYVIGTSTKVDISDVNVDKFDDKYFAKEAKKKKTKGEGEFFEA 178

Query: 619 XXXXXXXLPQEKKDDQKAVDAQLIKAIEAVPDLKAYLGARFSLRSGMKPHELVF 780
                  LPQEKKDDQK VD  L+KAIE+VP+LK+YLGARFSL++G+KPHELVF
Sbjct: 179 EKEEKNVLPQEKKDDQKTVDTALLKAIESVPELKSYLGARFSLKAGVKPHELVF 232


>gb|AFK47926.1| unknown [Medicago truncatula]
          Length = 234

 Score =  287 bits (734), Expect = 3e-75
 Identities = 151/234 (64%), Positives = 165/234 (70%)
 Frame = +1

Query: 79  MAPKENKPRTVSRNPDLIRGIGKFSKSRMYHKRGIWAIKAKNGGXXXXXXXXXXXXXXXX 258
           MAP + +   VSRNPDLIRGIGKFSKS+MYHK+GIWAIKAKNGG                
Sbjct: 1   MAPTKERAPRVSRNPDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAAE 60

Query: 259 XXXXXXXXDDVKKPIANRRKPKPTKLRASITPGTVLILLVGRFMGKRVVFLKQLPSGLLL 438
                   DDVKKP+ N+ KPK TKLRASITPGTVLILL GRF GKRVVFLKQLPSGLLL
Sbjct: 61  KPPKFYPADDVKKPLRNKHKPKQTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL 120

Query: 439 VTGPFKVNGVPLRRVNQSYVIGTSTKIDISGVNVDXXXXXXXXXXXXXXXXXXXXXXXXX 618
           VTGPFK+NGVPLRRVNQ+YVIGTSTK+DISGVNVD                         
Sbjct: 121 VTGPFKINGVPLRRVNQAYVIGTSTKVDISGVNVDNLDDKYFSKEAPKKKSKGEGEFFGS 180

Query: 619 XXXXXXXLPQEKKDDQKAVDAQLIKAIEAVPDLKAYLGARFSLRSGMKPHELVF 780
                  LPQ+KKDDQK VDA LIKAIE+VPDLK YLGARFSL++G+KPHELVF
Sbjct: 181 DKEEKKALPQQKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGVKPHELVF 234


>gb|ACJ84110.1| unknown [Medicago truncatula]
          Length = 234

 Score =  287 bits (734), Expect = 3e-75
 Identities = 151/234 (64%), Positives = 165/234 (70%)
 Frame = +1

Query: 79  MAPKENKPRTVSRNPDLIRGIGKFSKSRMYHKRGIWAIKAKNGGXXXXXXXXXXXXXXXX 258
           MAP + +   VSRNPDLIRGIGKFSKS+MYHK+GIWAIKAKNGG                
Sbjct: 1   MAPTKERAPRVSRNPDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAAE 60

Query: 259 XXXXXXXXDDVKKPIANRRKPKPTKLRASITPGTVLILLVGRFMGKRVVFLKQLPSGLLL 438
                   DDVKKP+ N+ KPK TKLRASITPGTVLILL GRF GKRVVFLKQLPSGLLL
Sbjct: 61  KPPKFYPADDVKKPLRNKHKPKQTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLL 120

Query: 439 VTGPFKVNGVPLRRVNQSYVIGTSTKIDISGVNVDXXXXXXXXXXXXXXXXXXXXXXXXX 618
           VTGPFK+NGVPLRRVNQ+YVIGTSTK+DISGVNVD                         
Sbjct: 121 VTGPFKINGVPLRRVNQAYVIGTSTKVDISGVNVDNLDDKYFSKEAPKKKSKGEGEFFES 180

Query: 619 XXXXXXXLPQEKKDDQKAVDAQLIKAIEAVPDLKAYLGARFSLRSGMKPHELVF 780
                  LPQ+KKDDQK VDA LIKAIE+VPDLK YLGARFSL++G+KPHELVF
Sbjct: 181 DKEEKKALPQQKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGVKPHELVF 234


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