BLASTX nr result

ID: Dioscorea21_contig00006243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006243
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558846.1| PREDICTED: U-box domain-containing protein 7...   120   1e-25
ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [S...   119   2e-25
ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|19...   119   3e-25
ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7...   118   6e-25
emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera]   118   6e-25

>ref|XP_003558846.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium
           distachyon]
          Length = 527

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/64 (87%), Positives = 61/64 (95%)
 Frame = +3

Query: 3   AIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGL 182
           A+AG+D+RVYQVANVK EWNL+KT PDLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGL
Sbjct: 453 AVAGSDIRVYQVANVKMEWNLVKTLPDLSGTGKVTSVKFGTDAKYVAVGSMDRNLRIFGL 512

Query: 183 PGDE 194
           PGDE
Sbjct: 513 PGDE 516


>ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [Sorghum bicolor]
           gi|241918360|gb|EER91504.1| hypothetical protein
           SORBIDRAFT_01g019790 [Sorghum bicolor]
          Length = 535

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = +3

Query: 3   AIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGL 182
           AI G+D+RVYQVANVK EWNLIKT PDLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGL
Sbjct: 462 AIGGSDIRVYQVANVKSEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGL 521

Query: 183 PGDE 194
           PGD+
Sbjct: 522 PGDD 525


>ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|195640644|gb|ACG39790.1|
           pre-mRNA-splicing factor 19 [Zea mays]
           gi|224030373|gb|ACN34262.1| unknown [Zea mays]
           gi|414871140|tpg|DAA49697.1| TPA: pre-mRNA-splicing
           factor 19 isoform 1 [Zea mays]
           gi|414871141|tpg|DAA49698.1| TPA: pre-mRNA-splicing
           factor 19 isoform 2 [Zea mays]
          Length = 526

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = +3

Query: 3   AIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGL 182
           AI G+D+RVYQVANVK EWNLIKT PDLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGL
Sbjct: 453 AIGGSDIRVYQVANVKAEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGL 512

Query: 183 PGDE 194
           PGD+
Sbjct: 513 PGDD 516


>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
           gi|296083725|emb|CBI23714.3| unnamed protein product
           [Vitis vinifera]
          Length = 524

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/64 (87%), Positives = 59/64 (92%)
 Frame = +3

Query: 3   AIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGL 182
           AIAG+D+RVYQVANVK EWN IKTFPDLSGTGK T VKFG DAKYLAVGSMDRNLRIFGL
Sbjct: 456 AIAGSDIRVYQVANVKSEWNCIKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIFGL 515

Query: 183 PGDE 194
           PGD+
Sbjct: 516 PGDD 519


>emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera]
          Length = 247

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/64 (87%), Positives = 59/64 (92%)
 Frame = +3

Query: 3   AIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGL 182
           AIAG+D+RVYQVANVK EWN IKTFPDLSGTGK T VKFG DAKYLAVGSMDRNLRIFGL
Sbjct: 179 AIAGSDIRVYQVANVKSEWNCIKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIFGL 238

Query: 183 PGDE 194
           PGD+
Sbjct: 239 PGDD 242


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