BLASTX nr result
ID: Dioscorea21_contig00006241
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00006241 (464 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003558846.1| PREDICTED: U-box domain-containing protein 7... 130 1e-28 ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [S... 127 1e-27 ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|19... 126 2e-27 ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 7... 125 3e-27 emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera] 125 4e-27 >ref|XP_003558846.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium distachyon] Length = 527 Score = 130 bits (326), Expect = 1e-28 Identities = 62/79 (78%), Positives = 70/79 (88%) Frame = +3 Query: 3 GSYLAIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLR 182 GSYLA+AG+D+RVYQVANVK EWNL+KT PDLSGTGKVTSVKFG DAKY+AVGSMDRNLR Sbjct: 449 GSYLAVAGSDIRVYQVANVKMEWNLVKTLPDLSGTGKVTSVKFGTDAKYVAVGSMDRNLR 508 Query: 183 IFALPGDDESGDTKS*KSE 239 IF LPGD++ + KS SE Sbjct: 509 IFGLPGDEQMEEAKSPVSE 527 >ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [Sorghum bicolor] gi|241918360|gb|EER91504.1| hypothetical protein SORBIDRAFT_01g019790 [Sorghum bicolor] Length = 535 Score = 127 bits (318), Expect = 1e-27 Identities = 59/75 (78%), Positives = 67/75 (89%) Frame = +3 Query: 3 GSYLAIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLR 182 G+YLAI G+D+RVYQVANVK EWNLIKT PDLSGTGKVTSVKFG DAKY+AVGSMDRNLR Sbjct: 458 GNYLAIGGSDIRVYQVANVKSEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLR 517 Query: 183 IFALPGDDESGDTKS 227 IF LPGDD+ ++ + Sbjct: 518 IFGLPGDDQMEESNT 532 >ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|195640644|gb|ACG39790.1| pre-mRNA-splicing factor 19 [Zea mays] gi|224030373|gb|ACN34262.1| unknown [Zea mays] gi|414871140|tpg|DAA49697.1| TPA: pre-mRNA-splicing factor 19 isoform 1 [Zea mays] gi|414871141|tpg|DAA49698.1| TPA: pre-mRNA-splicing factor 19 isoform 2 [Zea mays] Length = 526 Score = 126 bits (316), Expect = 2e-27 Identities = 59/69 (85%), Positives = 64/69 (92%) Frame = +3 Query: 3 GSYLAIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLR 182 G+YLAI G+D+RVYQVANVK EWNLIKT PDLSGTGKVTSVKFG DAKY+AVGSMDRNLR Sbjct: 449 GNYLAIGGSDIRVYQVANVKAEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLR 508 Query: 183 IFALPGDDE 209 IF LPGDD+ Sbjct: 509 IFGLPGDDQ 517 >ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium distachyon] Length = 527 Score = 125 bits (315), Expect = 3e-27 Identities = 58/72 (80%), Positives = 65/72 (90%) Frame = +3 Query: 3 GSYLAIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLR 182 GSYLA+AG+D+RVYQVANVK EWNLIKT PDLSGTGKVTS KFG D+KY+AVGSMDRNLR Sbjct: 449 GSYLAVAGSDIRVYQVANVKTEWNLIKTLPDLSGTGKVTSAKFGADSKYIAVGSMDRNLR 508 Query: 183 IFALPGDDESGD 218 IF LPG+D+ D Sbjct: 509 IFGLPGEDQMDD 520 >emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera] Length = 247 Score = 125 bits (314), Expect = 4e-27 Identities = 60/68 (88%), Positives = 62/68 (91%) Frame = +3 Query: 3 GSYLAIAGADVRVYQVANVKQEWNLIKTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLR 182 GSYLAIAG+D+RVYQVANVK EWN IKTFPDLSGTGK T VKFG DAKYLAVGSMDRNLR Sbjct: 175 GSYLAIAGSDIRVYQVANVKSEWNCIKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLR 234 Query: 183 IFALPGDD 206 IF LPGDD Sbjct: 235 IFGLPGDD 242