BLASTX nr result

ID: Dioscorea21_contig00006232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006232
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi...   116   2e-24
ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Gl...   115   3e-24
ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Gl...   115   3e-24
gb|ADG43153.1| auxin response factor 19 [Zea mays] gi|413934598|...   115   4e-24
gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]        114   6e-24

>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/75 (73%), Positives = 64/75 (85%)
 Frame = -3

Query: 257 GMVQMPAVNSKVYYFPQGHAEHAQGKPDFGSSPQVPALVLCWVAAVKFMADPETDEVFAK 78
           GMVQMP V+SKV+YFPQGHAEHA    DF ++P++PALVLC VAAVKFMADPETDEV+AK
Sbjct: 19  GMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPRIPALVLCRVAAVKFMADPETDEVYAK 78

Query: 77  IRLVPVRSNEHDYGD 33
           IRLVP+ +NE D  D
Sbjct: 79  IRLVPIANNELDCED 93


>ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 670

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/78 (70%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
 Frame = -3

Query: 257 GMVQMPAVNSKVYYFPQGHAEHAQGKPDFGSSP-QVPALVLCWVAAVKFMADPETDEVFA 81
           GMVQMP VNSKV+YFPQGHAEHAQ   DFG++   +P L+LC VAAVKF+ADPETDEVFA
Sbjct: 19  GMVQMPPVNSKVFYFPQGHAEHAQSNVDFGAARIPIPPLILCRVAAVKFLADPETDEVFA 78

Query: 80  KIRLVPVRSNEHDYGDGD 27
           ++RLVP+R++E DY D D
Sbjct: 79  RLRLVPLRNSELDYEDSD 96


>ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/85 (65%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -3

Query: 257 GMVQMPAVNSKVYYFPQGHAEHAQGKPDFGSSP-QVPALVLCWVAAVKFMADPETDEVFA 81
           GMVQMP VNSKV+YFPQGHAEHAQ   DFG++   +P L+LC VAAVKF+ADPETDEVFA
Sbjct: 19  GMVQMPPVNSKVFYFPQGHAEHAQSNVDFGAARIPIPPLILCCVAAVKFLADPETDEVFA 78

Query: 80  KIRLVPVRSNEHDYGDGDDKMNLGS 6
           ++R+VP+R++E DY D D     GS
Sbjct: 79  RLRMVPLRNSELDYEDSDGNGAEGS 103


>gb|ADG43153.1| auxin response factor 19 [Zea mays] gi|413934598|gb|AFW69149.1|
           hypothetical protein ZEAMMB73_407032 [Zea mays]
          Length = 716

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/75 (77%), Positives = 63/75 (84%)
 Frame = -3

Query: 257 GMVQMPAVNSKVYYFPQGHAEHAQGKPDFGSSPQVPALVLCWVAAVKFMADPETDEVFAK 78
           GMVQMPAV+SKVYYFPQGHAEHAQG  D  +  +VPALVLC VAAV+FMADP+TDEVFAK
Sbjct: 22  GMVQMPAVHSKVYYFPQGHAEHAQGPVDLPAG-RVPALVLCRVAAVRFMADPDTDEVFAK 80

Query: 77  IRLVPVRSNEHDYGD 33
           IRL PVR NE  Y D
Sbjct: 81  IRLAPVRPNEPGYAD 95


>gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/85 (67%), Positives = 67/85 (78%)
 Frame = -3

Query: 257 GMVQMPAVNSKVYYFPQGHAEHAQGKPDFGSSPQVPALVLCWVAAVKFMADPETDEVFAK 78
           GMVQ+P VNSKVYYFPQGHAEH     DF + P+ PAL+LC VAAVKF+ADPETDEV+AK
Sbjct: 20  GMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPALILCRVAAVKFLADPETDEVYAK 79

Query: 77  IRLVPVRSNEHDYGDGDDKMNLGSN 3
           IR+VPV +  +D+ D DD   LGSN
Sbjct: 80  IRVVPVGNKGNDFDDDDD--ILGSN 102


Top