BLASTX nr result
ID: Dioscorea21_contig00006226
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00006226
(2792 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|35550... 177 5e-52
ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|... 95 1e-51
ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|35548... 177 3e-51
ref|YP_001152206.1| ORF137 [Pinus koraiensis] gi|145048831|gb|AB... 203 2e-49
emb|CAN62678.1| hypothetical protein VITISV_012000 [Vitis vinifera] 137 5e-45
>ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|355505209|gb|AES86351.1|
Ycf68 protein [Medicago truncatula]
Length = 237
Score = 100 bits (249), Expect(3) = 5e-52
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +2
Query: 419 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGGASDWSEVVTR 562
HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEG ASDWSEVVTR
Sbjct: 72 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 119
Score = 89.7 bits (221), Expect(3) = 5e-52
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3
Query: 213 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGELT 338
TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSR REG+ T
Sbjct: 32 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRPREGDHT 73
Score = 64.7 bits (156), Expect(3) = 5e-52
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +2
Query: 53 MPRILLKERGALGNADTGGAWLSSARAVRCW 145
MPRILLKER A GNADTGGAWLSSARAVRCW
Sbjct: 1 MPRILLKERSAFGNADTGGAWLSSARAVRCW 31
Score = 177 bits (449), Expect = 1e-41
Identities = 95/136 (69%), Positives = 97/136 (71%), Gaps = 2/136 (1%)
Frame = +3
Query: 957 RALSHMDSSMCSSAPDPGMWIIQGTLAWRTPPVRIGV*NQTSPQEDRWGDSGEIQCRSNF 1136
RALSH+DSSMCSSAPDP MWIIQGTL EDRWGDSGEIQCRSNF
Sbjct: 119 RALSHIDSSMCSSAPDPEMWIIQGTL------------------EDRWGDSGEIQCRSNF 160
Query: 1137 LFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLN--GKMEXXXXXXXXXXX 1310
LFTRGIRAV+GGP LLSSRE IHPLSVYGQLSLEHRFRFGLN K E
Sbjct: 161 LFTRGIRAVQGGPSWLLSSREFIHPLSVYGQLSLEHRFRFGLNRKRKTEHLTTYLHRPRT 220
Query: 1311 XXSPLSFWGDGGIVPF 1358
SPLSFWGDGGIVPF
Sbjct: 221 TRSPLSFWGDGGIVPF 236
>ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|AES92424.1| Ycf68
[Medicago truncatula]
Length = 501
Score = 95.1 bits (235), Expect(3) = 1e-51
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +2
Query: 419 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGGASDWSEV 553
HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEG ASDWSEV
Sbjct: 316 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEV 360
Score = 89.7 bits (221), Expect(3) = 1e-51
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3
Query: 213 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGELT 338
TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSR REG+ T
Sbjct: 276 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRPREGDHT 317
Score = 68.6 bits (166), Expect(3) = 1e-51
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +2
Query: 47 LDMPRILLKERGALGNADTGGAWLSSARAVRCW 145
LDMPRILLKER A GNADTGGAWLSSARAVRCW
Sbjct: 243 LDMPRILLKERSAFGNADTGGAWLSSARAVRCW 275
Score = 79.3 bits (194), Expect = 5e-12
Identities = 68/171 (39%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Frame = +1
Query: 772 IPFFTSPCPSCVATRGRKKEREGWGFSRFWHSRPPTGRPPRRAISSVVERAP----DNCV 939
+PFF PC KK +E G S + P RP +RAISSVVE C
Sbjct: 362 LPFFV-PCRP-TGRHETKKGKERDGVSLAFDIVGPYVRPTQRAISSVVEALSHIDSSMCS 419
Query: 940 VVPGL*GLSATWIVQCAHQRLTRGCGSSKAH*HGVLLLFESEFETKLLLRRIDGAIQVRS 1119
P WI+Q L RIDGAIQVRS
Sbjct: 420 SAPD----PEMWIIQGT------------------------------LAWRIDGAIQVRS 445
Query: 1120 NVDLTFYSLVXXXXXXXXXXXXXLLENPYIPYQCMDSYLSSTGLGSASMGK 1272
NVD TFYSLV LEN YIPYQ MDSYLSSTGLG AS+ K
Sbjct: 446 NVDPTFYSLVGSGRSRGDHHDSSPLENSYIPYQYMDSYLSSTGLGLASIEK 496
>ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|355488624|gb|AES69827.1|
Ycf68 protein [Medicago truncatula]
Length = 237
Score = 97.8 bits (242), Expect(3) = 3e-51
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +2
Query: 419 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGGASDWSEVVTR 562
+TAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEG ASDWSEVVTR
Sbjct: 72 NTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 119
Score = 89.7 bits (221), Expect(3) = 3e-51
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3
Query: 213 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGELT 338
TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSR REG+ T
Sbjct: 32 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRPREGDNT 73
Score = 64.7 bits (156), Expect(3) = 3e-51
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +2
Query: 53 MPRILLKERGALGNADTGGAWLSSARAVRCW 145
MPRILLKER A GNADTGGAWLSSARAVRCW
Sbjct: 1 MPRILLKERSAFGNADTGGAWLSSARAVRCW 31
Score = 177 bits (449), Expect = 1e-41
Identities = 95/136 (69%), Positives = 97/136 (71%), Gaps = 2/136 (1%)
Frame = +3
Query: 957 RALSHMDSSMCSSAPDPGMWIIQGTLAWRTPPVRIGV*NQTSPQEDRWGDSGEIQCRSNF 1136
RALSH+DSSMCSSAPDP MWIIQGTL EDRWGDSGEIQCRSNF
Sbjct: 119 RALSHIDSSMCSSAPDPEMWIIQGTL------------------EDRWGDSGEIQCRSNF 160
Query: 1137 LFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLN--GKMEXXXXXXXXXXX 1310
LFTRGIRAV+GGP LLSSRE IHPLSVYGQLSLEHRFRFGLN K E
Sbjct: 161 LFTRGIRAVQGGPSWLLSSREFIHPLSVYGQLSLEHRFRFGLNRKRKTEHLTTYLHRPRT 220
Query: 1311 XXSPLSFWGDGGIVPF 1358
SPLSFWGDGGIVPF
Sbjct: 221 TRSPLSFWGDGGIVPF 236
>ref|YP_001152206.1| ORF137 [Pinus koraiensis] gi|145048831|gb|ABP35449.1| ORF137 [Pinus
koraiensis]
Length = 137
Score = 203 bits (516), Expect = 2e-49
Identities = 109/138 (78%), Positives = 116/138 (84%)
Frame = -2
Query: 769 YQLVPT*DNKLMSLVLLHRRETKEDFHIQA*LRRSSLLFGCEAVSNQNTQQALALPEKEV 590
YQLVPT D+KLM V LH R+ KE F L + +L +AVSN+ Q+ALALPEKEV
Sbjct: 4 YQLVPTWDDKLM--VSLHCRDPKEYFLPSTSLAQMCIL--PDAVSNEEAQKALALPEKEV 59
Query: 589 IQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADR 410
IQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTT GMASSHSVTGGVYKARERIHRRMADR
Sbjct: 60 IQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTWGMASSHSVTGGVYKARERIHRRMADR 119
Query: 409 RLLAIPTSCRRVAACNPN 356
RLLAIP SCRRVAACNPN
Sbjct: 120 RLLAIPASCRRVAACNPN 137
>emb|CAN62678.1| hypothetical protein VITISV_012000 [Vitis vinifera]
Length = 1193
Score = 137 bits (346), Expect(2) = 5e-45
Identities = 69/73 (94%), Positives = 70/73 (95%)
Frame = -2
Query: 640 VSNQNTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVT 461
+SNQNTQQALAL EKEVIQPHLPVRLP YDFTPVTSPAFGIPLLAVKVTTSGMASSHSVT
Sbjct: 100 ISNQNTQQALALLEKEVIQPHLPVRLPYYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVT 159
Query: 460 GGVYKARERIHRR 422
GGVYKARERIH R
Sbjct: 160 GGVYKARERIHCR 172
Score = 72.8 bits (177), Expect(2) = 5e-45
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3
Query: 399 RFRLHAGELQPAIRTEDGFLELAHPRGIATLCPAHCST 286
R R+H ELQPAIRTEDGFLELAHPRGIATLCP HCST
Sbjct: 166 RERIHCRELQPAIRTEDGFLELAHPRGIATLCPDHCST 203