BLASTX nr result

ID: Dioscorea21_contig00006164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006164
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...   352   1e-94
ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-conta...   340   3e-91
ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228...   338   1e-90
ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis...   337   4e-90
ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|2...   335   2e-89

>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform 1
            [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
            protein product [Vitis vinifera]
          Length = 294

 Score =  352 bits (903), Expect = 1e-94
 Identities = 176/293 (60%), Positives = 219/293 (74%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1239 MNGGPSGFHNAPVTRTIVIASTMLTIAFGFRSRPLRLGLDYQGIFQNFRLWRVLSSALAF 1060
            MNGGPSGFHNA VTR  VIA  + TI FG + RP +LGL YQ +F+  +LW+++ S  AF
Sbjct: 1    MNGGPSGFHNASVTRAFVIACALFTIFFGIQGRPNKLGLSYQDVFKKLQLWKLIVSVFAF 60

Query: 1059 SSTPEXXXXXXXXXXXXXFERQIGSNKYSVFVVFSLMFSTLFEVLALVIFKDFNLSTLAS 880
            SSTPE             FERQIGSNKYSVF++FS++ S LFE+LAL +FK+  L+ L S
Sbjct: 61   SSTPELMFGLYLLYYFRVFERQIGSNKYSVFIMFSIIVSLLFEILALSLFKEPTLNLLTS 120

Query: 879  GPYGLIFASFIPFYFDVPVSTRFNMFNIHLSDKSFVYLGGLQLLLSSWKRSLVPGICGIL 700
            GPYGLIF+SF+PFYFD+P+STR+ +F I  +DKSF+YL GLQLLLSSWKRS++PGICGIL
Sbjct: 121  GPYGLIFSSFVPFYFDIPISTRYRVFGIQFTDKSFIYLAGLQLLLSSWKRSILPGICGIL 180

Query: 699  AGSLYRLNVFGIRRIKFPKVLASFFSRLAWSSAGNSTHTTPRRNVIRNM-HYTGQPAQGN 523
            AGSLYRLN F IR++KFP+ ++SFFSRL+  + G+S+   P RN++ N   Y G+  +GN
Sbjct: 181  AGSLYRLNFFHIRKMKFPEFISSFFSRLSSPATGSSSTAAPSRNILGNAPSYAGRQVEGN 240

Query: 522  YSSAGRAPAPEPSESAVDILVSMGFDSTSARQALRQARNDVNAATNILLEDQT 364
            Y S+  A   EP E A+  LVSMGFD  SARQAL  ARNDVNAATNILLE Q+
Sbjct: 241  YPSSMGAATIEPPEDAIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQS 293


>ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-containing protein 2-like
            [Cucumis sativus]
          Length = 291

 Score =  340 bits (873), Expect = 3e-91
 Identities = 177/292 (60%), Positives = 214/292 (73%), Gaps = 1/292 (0%)
 Frame = -3

Query: 1239 MNGGPSGFHNAPVTRTIVIASTMLTIAFGFRSRPLRLGLDYQGIFQNFRLWRVLSSALAF 1060
            MNGGPSGF+NAPVTRT +IAS + TI FG + R ++LGL YQ +    RLW+++ S  AF
Sbjct: 1    MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 1059 SSTPEXXXXXXXXXXXXXFERQIGSNKYSVFVVFSLMFSTLFEVLALVIFKDFNLSTLAS 880
            SSTPE             FERQIGSNKYSVF++FS+  S LFEVLA+ + KD   + + S
Sbjct: 61   SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120

Query: 879  GPYGLIFASFIPFYFDVPVSTRFNMFNIHLSDKSFVYLGGLQLLLSSWKRSLVPGICGIL 700
            GPYGL+FASF+PF+FD+PVSTRF +F +  SDKSF+YL GLQLLLSSW+RS++PGICGIL
Sbjct: 121  GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 699  AGSLYRLNVFGIRRIKFPKVLASFFSRLAWSSAGNSTHTTPRRNVIRNM-HYTGQPAQGN 523
            AGSLYRLNVFGIR+ KFP+ ++SFFSRL+  SAGN     P R+V  NM  +  +  + N
Sbjct: 181  AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPP-AAPNRDVRGNMPSFMSRQVERN 239

Query: 522  YSSAGRAPAPEPSESAVDILVSMGFDSTSARQALRQARNDVNAATNILLEDQ 367
            Y S     A EPSE A+  LVSMGFD  SARQAL QARNDVN ATNILLE Q
Sbjct: 240  YPSV--PTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQ 289


>ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228515 [Cucumis sativus]
          Length = 291

 Score =  338 bits (868), Expect = 1e-90
 Identities = 176/292 (60%), Positives = 214/292 (73%), Gaps = 1/292 (0%)
 Frame = -3

Query: 1239 MNGGPSGFHNAPVTRTIVIASTMLTIAFGFRSRPLRLGLDYQGIFQNFRLWRVLSSALAF 1060
            MNGGPSGF+NAPVTRT +IAS + TI FG + R ++LGL YQ +    RLW+++ S  AF
Sbjct: 1    MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 1059 SSTPEXXXXXXXXXXXXXFERQIGSNKYSVFVVFSLMFSTLFEVLALVIFKDFNLSTLAS 880
            SSTPE             FERQIGSNKYSVF++FS+  S LFEVLA+ + KD   + + S
Sbjct: 61   SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120

Query: 879  GPYGLIFASFIPFYFDVPVSTRFNMFNIHLSDKSFVYLGGLQLLLSSWKRSLVPGICGIL 700
            GPYGL+FASF+PF+FD+PVSTRF +F +  SDKSF+YL GLQLLLSSW+RS++PGICGIL
Sbjct: 121  GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 699  AGSLYRLNVFGIRRIKFPKVLASFFSRLAWSSAGNSTHTTPRRNVIRNM-HYTGQPAQGN 523
            AGSLYRLNVFGIR+ KFP+ ++SFFSRL+  SAGN     P R+V  NM  +  +  + N
Sbjct: 181  AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPP-AAPNRDVRGNMPSFMSRQVERN 239

Query: 522  YSSAGRAPAPEPSESAVDILVSMGFDSTSARQALRQARNDVNAATNILLEDQ 367
            Y S     A EPSE A+  LVSMGFD  SARQAL QARN+VN ATNILLE Q
Sbjct: 240  YPSV--PTATEPSEDAIATLVSMGFDRNSARQALVQARNNVNIATNILLESQ 289


>ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]
            gi|9662993|emb|CAC00737.1| putative protein [Arabidopsis
            thaliana] gi|21553945|gb|AAM63026.1| unknown [Arabidopsis
            thaliana] gi|28950711|gb|AAO63279.1| At3g56740
            [Arabidopsis thaliana] gi|110735889|dbj|BAE99920.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332646039|gb|AEE79560.1| Ubiquitin-associated (UBA)
            protein [Arabidopsis thaliana]
          Length = 293

 Score =  337 bits (864), Expect = 4e-90
 Identities = 175/296 (59%), Positives = 213/296 (71%), Gaps = 4/296 (1%)
 Frame = -3

Query: 1239 MNGGPSGFHNAPVTRTIVIASTMLTIAFGFRSRPLRLGLDYQGIFQNFRLWRVLSSALAF 1060
            MNGGPSGFHNAPVT+  VI S + T+ FG + R  +LGL YQ IF+ FR+W+++ S  AF
Sbjct: 1    MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 1059 SSTPEXXXXXXXXXXXXXFERQIGSNKYSVFVVFSLMFSTLFEVLALVIFKDFNLSTLAS 880
            SSTPE             FERQIGSNKYSVF++FS   S L EV+ L + KD   + L S
Sbjct: 61   SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTS 120

Query: 879  GPYGLIFASFIPFYFDVPVSTRFNMFNIHLSDKSFVYLGGLQLLLSSWKRSLVPGICGIL 700
            GPYGLIFASFIPFY D+PVSTRF +F ++ SDKSF+YL G+QLLLSSWKRS+ PGICGI+
Sbjct: 121  GPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGII 180

Query: 699  AGSLYRLNVFGIRRIKFPKVLASFFSRLAWSSAGNSTHTTPRRNVIRNMH-YTGQPAQGN 523
            AGSLYRLN+ GIR+ KFP+ +ASFFSRL++ S GNS    P RN++  +   TG+ A+ +
Sbjct: 181  AGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRAERS 240

Query: 522  YSSAGRAPAP---EPSESAVDILVSMGFDSTSARQALRQARNDVNAATNILLEDQT 364
                  AP P   EPSE A+  LVSMGFD  +ARQAL  ARNDVNAATNILLE Q+
Sbjct: 241  QP----APLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQS 292


>ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|222853957|gb|EEE91504.1|
            predicted protein [Populus trichocarpa]
          Length = 290

 Score =  335 bits (858), Expect = 2e-89
 Identities = 174/294 (59%), Positives = 214/294 (72%), Gaps = 2/294 (0%)
 Frame = -3

Query: 1239 MNGGPSGFHNAPVTRTIVIASTMLTIAFGFRSRPLRLGLDYQGIFQNFRLWRVLSSALAF 1060
            MNGGPSGF+NAPVTR  VIAS + ++  G +    +LGL YQ IF+N RLW+++ S  AF
Sbjct: 1    MNGGPSGFNNAPVTRICVIASAIFSVFLGIKGGSNKLGLSYQDIFRNPRLWKLVLSVFAF 60

Query: 1059 SSTPEXXXXXXXXXXXXXFERQIGSNKYSVFVVFSLMFSTLFEVLALVIFKDFNLSTLAS 880
            SSTPE             FERQIGSNKYSVF++FS++ S LFEV A+ + +D   + L S
Sbjct: 61   SSTPEMMFGLYLLYYFRVFERQIGSNKYSVFILFSVIVSLLFEVFAVTLLQDPLANLLTS 120

Query: 879  GPYGLIFASFIPFYFDVPVSTRFNMFNIHLSDKSFVYLGGLQLLLSSWKRSLVPGICGIL 700
            GPYGLIFAS++PFYFD+PVSTRF +  +HLSDKSF+YL G+QLLLSSWKRS++PGICGIL
Sbjct: 121  GPYGLIFASYVPFYFDIPVSTRFRVVGVHLSDKSFIYLAGVQLLLSSWKRSILPGICGIL 180

Query: 699  AGSLYRLNVFGIRRIKFPKVLASFFSRLAWSSAGNSTHTTPRRNVIRNMHYTGQPAQGNY 520
            AGSLYRLN+FGIR+ KFP+ +ASFFSRL+W S G     +PR    RN+  +     G +
Sbjct: 181  AGSLYRLNLFGIRKAKFPEFIASFFSRLSWPSTG-----SPRGATSRNVTGSAPSYAGRH 235

Query: 519  SS--AGRAPAPEPSESAVDILVSMGFDSTSARQALRQARNDVNAATNILLEDQT 364
             +  A  AP+ EPSE A+  L SMGFD  SARQAL QARNDVN ATNILLE Q+
Sbjct: 236  RTYPAPMAPSTEPSEDAIATLASMGFDRNSARQALVQARNDVNTATNILLEAQS 289


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