BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006152
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001294396.1| hypothetical chloroplast RF2 [Dioscorea elep...    60   9e-14
ref|YP_003434019.1| hypothetical chloroplast RF21 [Typha latifol...    59   1e-12
gb|AEZ01468.1| hypothetical chloroplast RF21 (chloroplast) [Japo...    59   1e-12
gb|AEZ48750.1| hypothetical chloroplast RF2, partial [Potarophyt...    59   1e-12
gb|AEZ48753.1| hypothetical chloroplast RF2, partial [Sparganium...    59   1e-12

>ref|YP_001294396.1| hypothetical chloroplast RF2 [Dioscorea elephantipes]
            gi|149390416|ref|YP_001294415.1| hypothetical chloroplast
            RF2 [Dioscorea elephantipes]
            gi|205412894|sp|A6MMQ1.1|YCF2_DIOEL RecName: Full=Protein
            ycf2 gi|148668089|gb|ABR01473.1| hypothetical chloroplast
            RF2 [Dioscorea elephantipes] gi|148668108|gb|ABR01492.1|
            hypothetical chloroplast RF2 [Dioscorea elephantipes]
          Length = 2260

 Score = 60.5 bits (145), Expect(2) = 9e-14
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +2

Query: 284  AIYSIADITATPLTKEQIANFERTYCQSLSYMN 382
            AIYSIADI+ATPLT+EQIANFERTYCQ LS MN
Sbjct: 1105 AIYSIADISATPLTEEQIANFERTYCQPLSDMN 1137



 Score = 40.8 bits (94), Expect(2) = 9e-14
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +3

Query: 219  GDETHKLYKSFYFLIPSDPFVEQFIRS 299
            GDET+KLYKSF+F I SDPFV + I S
Sbjct: 1082 GDETYKLYKSFHFPIRSDPFVRRAIYS 1108


>ref|YP_003434019.1| hypothetical chloroplast RF21 [Typha latifolia]
            gi|289065151|ref|YP_003434036.1| hypothetical chloroplast
            RF21 [Typha latifolia] gi|281371816|gb|ADA63743.1|
            hypothetical chloroplast RF21 [Typha latifolia]
            gi|281371834|gb|ADA63761.1| hypothetical chloroplast RF21
            [Typha latifolia]
          Length = 2293

 Score = 58.9 bits (141), Expect(2) = 1e-12
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +2

Query: 284  AIYSIADITATPLTKEQIANFERTYCQSLSYMN 382
            AIYSIADI+ATPLT+EQI NFERTYCQ LS MN
Sbjct: 1126 AIYSIADISATPLTEEQIVNFERTYCQPLSDMN 1158



 Score = 38.9 bits (89), Expect(2) = 1e-12
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 219  GDETHKLYKSFYFLIPSDPFVEQFIRS 299
            GDET+ LYKSF+F I SDPFV + I S
Sbjct: 1103 GDETYNLYKSFHFPIRSDPFVRRAIYS 1129


>gb|AEZ01468.1| hypothetical chloroplast RF21 (chloroplast) [Japonolirion osense]
          Length = 2283

 Score = 58.9 bits (141), Expect(2) = 1e-12
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +2

Query: 284  AIYSIADITATPLTKEQIANFERTYCQSLSYMN 382
            AIYSIADI+ATPLT+EQI NFERTYCQ LS MN
Sbjct: 1124 AIYSIADISATPLTEEQIVNFERTYCQPLSDMN 1156



 Score = 38.9 bits (89), Expect(2) = 1e-12
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 219  GDETHKLYKSFYFLIPSDPFVEQFIRS 299
            GDET+ LYKSF+F I SDPFV + I S
Sbjct: 1101 GDETYNLYKSFHFPIRSDPFVRRAIYS 1127


>gb|AEZ48750.1| hypothetical chloroplast RF2, partial [Potarophytum riparium]
          Length = 2274

 Score = 58.9 bits (141), Expect(2) = 1e-12
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +2

Query: 284  AIYSIADITATPLTKEQIANFERTYCQSLSYMN 382
            AIYSIADI+ATPLT+EQI NFERTYCQ LS MN
Sbjct: 1118 AIYSIADISATPLTEEQIVNFERTYCQPLSDMN 1150



 Score = 38.9 bits (89), Expect(2) = 1e-12
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 219  GDETHKLYKSFYFLIPSDPFVEQFIRS 299
            GDET+ LYKSF+F I SDPFV + I S
Sbjct: 1095 GDETYNLYKSFHFPIRSDPFVRRAIYS 1121


>gb|AEZ48753.1| hypothetical chloroplast RF2, partial [Sparganium eurycarpum]
          Length = 2260

 Score = 58.9 bits (141), Expect(2) = 1e-12
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +2

Query: 284  AIYSIADITATPLTKEQIANFERTYCQSLSYMN 382
            AIYSIADI+ATPLT+EQI NFERTYCQ LS MN
Sbjct: 1110 AIYSIADISATPLTEEQIVNFERTYCQPLSDMN 1142



 Score = 38.9 bits (89), Expect(2) = 1e-12
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 219  GDETHKLYKSFYFLIPSDPFVEQFIRS 299
            GDET+ LYKSF+F I SDPFV + I S
Sbjct: 1087 GDETYNLYKSFHFPIRSDPFVRRAIYS 1113