BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006094
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like...   166   6e-39
ref|XP_002519872.1| conserved hypothetical protein [Ricinus comm...   162   1e-37
ref|XP_003517076.1| PREDICTED: protein PAM68, chloroplastic-like...   160   5e-37
ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vit...   160   5e-37
ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana] ...   159   7e-37

>ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like [Cucumis sativus]
           gi|449509526|ref|XP_004163614.1| PREDICTED: protein
           PAM68, chloroplastic-like [Cucumis sativus]
          Length = 213

 Score =  166 bits (421), Expect = 6e-39
 Identities = 85/164 (51%), Positives = 104/164 (63%), Gaps = 3/164 (1%)
 Frame = +3

Query: 135 RPKPSTSHQILFPSRALSLPSALKSPKGFGPPSRTQKSKQKR---TKPXXXXXXXXXXXX 305
           RP  + +      +R  SL + L+ PKGFGP SR +K+K+ R   ++             
Sbjct: 44  RPTINQNQNQTHTNRPTSLNATLRRPKGFGPASRKKKTKKTRREGSEDDDNEEEEEEDEE 103

Query: 306 XXXXXXTIPEVVTNRMMRRMGLSIGIXXXXXXXXXXXXXXXKVVAKIDVPTWIPFIVSFF 485
                  IPEVVTNRMM RMG ++GI               KV  KIDVP+W+P IVSFF
Sbjct: 104 EEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFF 163

Query: 486 FFGSALLGVSYGIVSASWDPLREGSLLGWNEARRNWPVFWESLW 617
           FFGSALLGVSYGIVS+SWDPLREGSLLGWNEA++NWPVFW+S+W
Sbjct: 164 FFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQKNWPVFWKSIW 207


>ref|XP_002519872.1| conserved hypothetical protein [Ricinus communis]
           gi|223540918|gb|EEF42476.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  162 bits (409), Expect = 1e-37
 Identities = 79/145 (54%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
 Frame = +3

Query: 189 LPSALKSPKGFGP-PSRTQKSKQKRT-KPXXXXXXXXXXXXXXXXXXTIPEVVTNRMMRR 362
           L + L SP+GFGP P +T+++K+ +T  P                   IPEVVTNRM+ R
Sbjct: 70  LYATLNSPRGFGPSPKKTKRTKKLKTVNPNDDDDDDNNDDDDEQDAGIIPEVVTNRMISR 129

Query: 363 MGLSIGIXXXXXXXXXXXXXXXKVVAKIDVPTWIPFIVSFFFFGSALLGVSYGIVSASWD 542
           MG S+G+               KV  KIDVPTW+P+IVSFFFFG+ALLGVSYGIVS+SWD
Sbjct: 130 MGFSVGVPLFIGLLFFPFFYYLKVGLKIDVPTWVPYIVSFFFFGTALLGVSYGIVSSSWD 189

Query: 543 PLREGSLLGWNEARRNWPVFWESLW 617
           P+REGSLLGWNEA++NWPVFW+S W
Sbjct: 190 PMREGSLLGWNEAQKNWPVFWQSFW 214


>ref|XP_003517076.1| PREDICTED: protein PAM68, chloroplastic-like [Glycine max]
          Length = 208

 Score =  160 bits (404), Expect = 5e-37
 Identities = 79/153 (51%), Positives = 94/153 (61%)
 Frame = +3

Query: 156 HQILFPSRALSLPSALKSPKGFGPPSRTQKSKQKRTKPXXXXXXXXXXXXXXXXXXTIPE 335
           HQ+ + S    + +  K PKGFGP  + +K  +K  +                    IPE
Sbjct: 48  HQVHYFSHLAPICATFKEPKGFGPTPKKKKKSKKMRRDYEEEDDEEEEEEEEPDRGVIPE 107

Query: 336 VVTNRMMRRMGLSIGIXXXXXXXXXXXXXXXKVVAKIDVPTWIPFIVSFFFFGSALLGVS 515
           VVTNRMM RM +S+GI               KV  KIDVPTW+PFIVSFFFFGSALLGVS
Sbjct: 108 VVTNRMMSRMAVSVGIPLGIGLLFFPFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVS 167

Query: 516 YGIVSASWDPLREGSLLGWNEARRNWPVFWESL 614
           YGIVS+SWDPLREGS  GW EA++NWPVFW+SL
Sbjct: 168 YGIVSSSWDPLREGSFWGWTEAQKNWPVFWQSL 200


>ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vitis vinifera]
           gi|147866231|emb|CAN79943.1| hypothetical protein
           VITISV_021078 [Vitis vinifera]
          Length = 196

 Score =  160 bits (404), Expect = 5e-37
 Identities = 89/189 (47%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
 Frame = +3

Query: 57  P*IRKTSPMESLFLRPAPFSSLQTPHRPKPSTSHQILFPSRALSLPSALKSPKGFGP-PS 233
           P I   S   +L++   P S+      PK  + +++L  +   +   +L  PKGFGP P 
Sbjct: 11  PLISPPSSTPALYISQFPIST------PKLYSKNRLLHSTPPCA---SLNRPKGFGPSPR 61

Query: 234 RTQKSKQ-KRTKPXXXXXXXXXXXXXXXXXXTIPEVVTNRMMRRMGLSIGIXXXXXXXXX 410
           +T+K K+ K+                      IPE+VTNRM+ RMG S+GI         
Sbjct: 62  KTEKRKKLKKNYSDDEDEEEEEEEGAEAEEGVIPEIVTNRMISRMGFSVGIPLMIGLLFF 121

Query: 411 XXXXXXKVVAKIDVPTWIPFIVSFFFFGSALLGVSYGIVSASWDPLREGSLLGWNEARRN 590
                 KV  KIDVPTW+PFIVSFFFFGSALLGVSYGIVS+SWDPLREGS LGW EA+ N
Sbjct: 122 PFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFLGWTEAQNN 181

Query: 591 WPVFWESLW 617
           WPVFW+SLW
Sbjct: 182 WPVFWQSLW 190


>ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75098840|sp|O49668.1|PAM68_ARATH RecName:
           Full=Protein PAM68, chloroplastic; AltName:
           Full=PHOTOSYNTHESIS AFFECTED MUTANT 68; Flags: Precursor
           gi|2828285|emb|CAA16699.1| putative protein [Arabidopsis
           thaliana] gi|7268705|emb|CAB78912.1| putative protein
           [Arabidopsis thaliana] gi|119360097|gb|ABL66777.1|
           At4g19100 [Arabidopsis thaliana]
           gi|332658740|gb|AEE84140.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 214

 Score =  159 bits (403), Expect = 7e-37
 Identities = 83/167 (49%), Positives = 99/167 (59%), Gaps = 7/167 (4%)
 Frame = +3

Query: 138 PKPSTSHQILFPSRALSLPSALKSPKGFGPPSRTQKSKQKRTKPXXXXXXXXXXXXXXXX 317
           PK  T    L  SR   L + + SPKGFGPP +  K K K+ KP                
Sbjct: 43  PKSITCINRLEISRIAPLHATMNSPKGFGPPPKKTK-KSKKPKPGNQSDEDDDDEDEDDD 101

Query: 318 XX-------TIPEVVTNRMMRRMGLSIGIXXXXXXXXXXXXXXXKVVAKIDVPTWIPFIV 476
                     IPE+VTNRM+ RMG ++G+               KV  K+DVPTW+PFIV
Sbjct: 102 DEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIV 161

Query: 477 SFFFFGSALLGVSYGIVSASWDPLREGSLLGWNEARRNWPVFWESLW 617
           SF FFG+AL GVSYGIVS+SWDPLREGSLLGWNEA++NWPVFW+S W
Sbjct: 162 SFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFW 208