BLASTX nr result

ID: Dioscorea21_contig00006093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006093
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group] g...   104   9e-21
gb|EEE64974.1| hypothetical protein OsJ_19883 [Oryza sativa Japo...   104   9e-21
ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO larg...   103   2e-20
ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding pro...   103   2e-20
gb|AAB39827.1| chaperonin-60 beta subunit [Solanum tuberosum]         103   2e-20

>ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group]
           gi|7248401|dbj|BAA92724.1| putative chaperonin 60 beta
           precursor [Oryza sativa Japonica Group]
           gi|113594641|dbj|BAF18515.1| Os06g0114000 [Oryza sativa
           Japonica Group] gi|164375533|gb|ABY52934.1| RuBisCo
           subunit binding-protein beta subunit [Oryza sativa
           Japonica Group] gi|215715264|dbj|BAG95015.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 601

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -3

Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83
           YNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD            P TNPMD
Sbjct: 536 YNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMD 595

Query: 82  NSGYGY 65
           NSGYGY
Sbjct: 596 NSGYGY 601


>gb|EEE64974.1| hypothetical protein OsJ_19883 [Oryza sativa Japonica Group]
          Length = 588

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -3

Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83
           YNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD            P TNPMD
Sbjct: 523 YNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMD 582

Query: 82  NSGYGY 65
           NSGYGY
Sbjct: 583 NSGYGY 588


>ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO large subunit-binding
           protein subunit beta, chloroplastic-like [Cucumis
           sativus]
          Length = 608

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -3

Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83
           YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD            PA NPMD
Sbjct: 543 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMD 602

Query: 82  NSGYGY 65
           NSGYGY
Sbjct: 603 NSGYGY 608


>ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Cucumis sativus]
          Length = 608

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -3

Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83
           YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD            PA NPMD
Sbjct: 543 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMD 602

Query: 82  NSGYGY 65
           NSGYGY
Sbjct: 603 NSGYGY 608


>gb|AAB39827.1| chaperonin-60 beta subunit [Solanum tuberosum]
          Length = 599

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/66 (77%), Positives = 51/66 (77%)
 Frame = -3

Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83
           YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD             A NPMD
Sbjct: 534 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAAVAGNPMD 593

Query: 82  NSGYGY 65
           NSGYGY
Sbjct: 594 NSGYGY 599


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