BLASTX nr result
ID: Dioscorea21_contig00006093
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00006093 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group] g... 104 9e-21 gb|EEE64974.1| hypothetical protein OsJ_19883 [Oryza sativa Japo... 104 9e-21 ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO larg... 103 2e-20 ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding pro... 103 2e-20 gb|AAB39827.1| chaperonin-60 beta subunit [Solanum tuberosum] 103 2e-20 >ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group] gi|7248401|dbj|BAA92724.1| putative chaperonin 60 beta precursor [Oryza sativa Japonica Group] gi|113594641|dbj|BAF18515.1| Os06g0114000 [Oryza sativa Japonica Group] gi|164375533|gb|ABY52934.1| RuBisCo subunit binding-protein beta subunit [Oryza sativa Japonica Group] gi|215715264|dbj|BAG95015.1| unnamed protein product [Oryza sativa Japonica Group] Length = 601 Score = 104 bits (259), Expect = 9e-21 Identities = 52/66 (78%), Positives = 52/66 (78%) Frame = -3 Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83 YNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD P TNPMD Sbjct: 536 YNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMD 595 Query: 82 NSGYGY 65 NSGYGY Sbjct: 596 NSGYGY 601 >gb|EEE64974.1| hypothetical protein OsJ_19883 [Oryza sativa Japonica Group] Length = 588 Score = 104 bits (259), Expect = 9e-21 Identities = 52/66 (78%), Positives = 52/66 (78%) Frame = -3 Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83 YNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD P TNPMD Sbjct: 523 YNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMD 582 Query: 82 NSGYGY 65 NSGYGY Sbjct: 583 NSGYGY 588 >ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Cucumis sativus] Length = 608 Score = 103 bits (256), Expect = 2e-20 Identities = 52/66 (78%), Positives = 52/66 (78%) Frame = -3 Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD PA NPMD Sbjct: 543 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMD 602 Query: 82 NSGYGY 65 NSGYGY Sbjct: 603 NSGYGY 608 >ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Cucumis sativus] Length = 608 Score = 103 bits (256), Expect = 2e-20 Identities = 52/66 (78%), Positives = 52/66 (78%) Frame = -3 Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD PA NPMD Sbjct: 543 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMD 602 Query: 82 NSGYGY 65 NSGYGY Sbjct: 603 NSGYGY 608 >gb|AAB39827.1| chaperonin-60 beta subunit [Solanum tuberosum] Length = 599 Score = 103 bits (256), Expect = 2e-20 Identities = 51/66 (77%), Positives = 51/66 (77%) Frame = -3 Query: 262 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXPATNPMD 83 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD A NPMD Sbjct: 534 YNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAAVAGNPMD 593 Query: 82 NSGYGY 65 NSGYGY Sbjct: 594 NSGYGY 599