BLASTX nr result

ID: Dioscorea21_contig00006092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006092
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group] g...   104   1e-20
gb|EEE64974.1| hypothetical protein OsJ_19883 [Oryza sativa Japo...   104   1e-20
gb|ABK24483.1| unknown [Picea sitchensis]                             104   2e-20
ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro...   103   2e-20
gb|ACN34709.1| unknown [Zea mays] gi|413953489|gb|AFW86138.1| pu...   102   5e-20

>ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group]
           gi|7248401|dbj|BAA92724.1| putative chaperonin 60 beta
           precursor [Oryza sativa Japonica Group]
           gi|113594641|dbj|BAF18515.1| Os06g0114000 [Oryza sativa
           Japonica Group] gi|164375533|gb|ABY52934.1| RuBisCo
           subunit binding-protein beta subunit [Oryza sativa
           Japonica Group] gi|215715264|dbj|BAG95015.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 601

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/66 (77%), Positives = 52/66 (78%)
 Frame = +3

Query: 3   YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXXATNPMD 182
           YNAATG+YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD              TNPMD
Sbjct: 536 YNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMD 595

Query: 183 NSGYGY 200
           NSGYGY
Sbjct: 596 NSGYGY 601


>gb|EEE64974.1| hypothetical protein OsJ_19883 [Oryza sativa Japonica Group]
          Length = 588

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/66 (77%), Positives = 52/66 (78%)
 Frame = +3

Query: 3   YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXXATNPMD 182
           YNAATG+YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD              TNPMD
Sbjct: 523 YNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMD 582

Query: 183 NSGYGY 200
           NSGYGY
Sbjct: 583 NSGYGY 588


>gb|ABK24483.1| unknown [Picea sitchensis]
          Length = 617

 Score =  104 bits (259), Expect = 2e-20
 Identities = 51/66 (77%), Positives = 52/66 (78%)
 Frame = +3

Query: 3   YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXXATNPMD 182
           YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD             + NPMD
Sbjct: 552 YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPEPAASPNPMD 611

Query: 183 NSGYGY 200
           NSGYGY
Sbjct: 612 NSGYGY 617


>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297743227|emb|CBI36094.3| unnamed protein product
           [Vitis vinifera]
          Length = 609

 Score =  103 bits (258), Expect = 2e-20
 Identities = 51/66 (77%), Positives = 52/66 (78%)
 Frame = +3

Query: 3   YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXXATNPMD 182
           YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVA+TFLTSD             A NPMD
Sbjct: 544 YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVVDIKEPEPIPAGNPMD 603

Query: 183 NSGYGY 200
           NSGYGY
Sbjct: 604 NSGYGY 609


>gb|ACN34709.1| unknown [Zea mays] gi|413953489|gb|AFW86138.1| putative TCP-1/cpn60
           chaperonin family protein [Zea mays]
          Length = 600

 Score =  102 bits (255), Expect = 5e-20
 Identities = 50/66 (75%), Positives = 51/66 (77%)
 Frame = +3

Query: 3   YNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDXXXXXXXXXXXXXATNPMD 182
           YNAATG+YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD               NPMD
Sbjct: 535 YNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPEAAPVANPMD 594

Query: 183 NSGYGY 200
           NSGYGY
Sbjct: 595 NSGYGY 600


Top