BLASTX nr result

ID: Dioscorea21_contig00006073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006073
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441291.1| hypothetical protein SORBIDRAFT_09g023970 [S...   375   e-101
ref|XP_003568215.1| PREDICTED: F-box protein At5g46170-like [Bra...   374   e-101
gb|ACG44263.1| F-box domain containing protein [Zea mays]             367   4e-99
ref|NP_001055899.2| Os05g0490300 [Oryza sativa Japonica Group] g...   367   5e-99
gb|AAT69637.1| unknown protein, contains f-box domain [Oryza sat...   367   5e-99

>ref|XP_002441291.1| hypothetical protein SORBIDRAFT_09g023970 [Sorghum bicolor]
            gi|241946576|gb|EES19721.1| hypothetical protein
            SORBIDRAFT_09g023970 [Sorghum bicolor]
          Length = 354

 Score =  375 bits (962), Expect = e-101
 Identities = 184/228 (80%), Positives = 204/228 (89%), Gaps = 1/228 (0%)
 Frame = +1

Query: 577  QVLKNFTHVRNLKIELPAGDVGTEDGVLLKWRAEFGSTLQNCVILGGTRIDCNPTT-DQE 753
            QVL+NFTHVRNL+IELP+GDVGTE+GVLLKWRAE+GSTLQNCVILGGTR+D  P   + E
Sbjct: 127  QVLRNFTHVRNLRIELPSGDVGTEEGVLLKWRAEYGSTLQNCVILGGTRVDRKPVGGEHE 186

Query: 754  PSVEDNGSIPESFYTNGGLKLRVVWTISSMIAASTRHYLLHPVIKDHPTLRSLVLIDADG 933
            PS+EDNGS+PESFYTNGGLKLRVVWTISS+IAASTRHYLL  +I DHPTLRSLVL DADG
Sbjct: 187  PSLEDNGSMPESFYTNGGLKLRVVWTISSLIAASTRHYLLRSIINDHPTLRSLVLTDADG 246

Query: 934  QGTLSMGVDQLKDFREKPLSASASSNRTQIPASSMKLRYAPYLELPGGMGVQGATLVVIK 1113
            QGTL MG +QLK+FRE  LSASA SNRTQ+PA +MKL+YAPYLELPGGM +QGATLV IK
Sbjct: 247  QGTLCMGAEQLKEFRENQLSASACSNRTQVPACNMKLKYAPYLELPGGMALQGATLVAIK 306

Query: 1114 PSSEGSNGNNISRKETDAFVFGAFDGPFNSAVKALMKRRTYLLEMNGF 1257
            PS EGSNG + +RKE D FVFGAFDGPF +AVKALMKRRTYLLEMNGF
Sbjct: 307  PSPEGSNGGHPNRKEADGFVFGAFDGPFKAAVKALMKRRTYLLEMNGF 354



 Score =  124 bits (311), Expect = 7e-26
 Identities = 61/84 (72%), Positives = 70/84 (83%)
 Frame = +1

Query: 157 MQPRVRIHADPSPDLDEFDRLPDSLVLLILNKVADVRSLGRCAAVSRRFNMLVPLVHDIY 336
           M P+ RIHADP  ++D FD LPDSLVLLILNKV DVRSLGRC AVS+R   LVPLVHD+Y
Sbjct: 1   MHPKARIHADPVREVDHFDCLPDSLVLLILNKVEDVRSLGRCYAVSKRLCGLVPLVHDVY 60

Query: 337 VKIDRVVTVDGDSDEGMNPSSPKP 408
           VKIDRVV VDGD+++ +N SSPKP
Sbjct: 61  VKIDRVVAVDGDAEDTLNLSSPKP 84


>ref|XP_003568215.1| PREDICTED: F-box protein At5g46170-like [Brachypodium distachyon]
          Length = 356

 Score =  374 bits (960), Expect = e-101
 Identities = 182/228 (79%), Positives = 205/228 (89%), Gaps = 1/228 (0%)
 Frame = +1

Query: 577  QVLKNFTHVRNLKIELPAGDVGTEDGVLLKWRAEFGSTLQNCVILGGTRIDCNPT-TDQE 753
            QVL+NFTH+RNL+IELP+GDVGTEDG+LLKWRAE+GSTLQNCVILGGTR+D  P   + E
Sbjct: 129  QVLRNFTHIRNLQIELPSGDVGTEDGILLKWRAEYGSTLQNCVILGGTRVDRKPVGAEHE 188

Query: 754  PSVEDNGSIPESFYTNGGLKLRVVWTISSMIAASTRHYLLHPVIKDHPTLRSLVLIDADG 933
            PS +DNGS+PESFYTNGGLKLRVVWTISS+IAASTRHYLL  +IKDHPTL SLVL DADG
Sbjct: 189  PSSDDNGSMPESFYTNGGLKLRVVWTISSLIAASTRHYLLQSIIKDHPTLASLVLTDADG 248

Query: 934  QGTLSMGVDQLKDFREKPLSASASSNRTQIPASSMKLRYAPYLELPGGMGVQGATLVVIK 1113
            QGTL MG +QLK+FRE  LSASA SNRTQ+PA SMKL+YAPYLELPGG+ +QGATLV IK
Sbjct: 249  QGTLCMGAEQLKEFRENQLSASACSNRTQVPACSMKLKYAPYLELPGGIALQGATLVAIK 308

Query: 1114 PSSEGSNGNNISRKETDAFVFGAFDGPFNSAVKALMKRRTYLLEMNGF 1257
            P++EGSNG++ISRKETDAF+ GAFDGPF  A KALMKRRTYLLEMNGF
Sbjct: 309  PATEGSNGSHISRKETDAFISGAFDGPFKFAAKALMKRRTYLLEMNGF 356



 Score =  121 bits (303), Expect = 6e-25
 Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 2/86 (2%)
 Frame = +1

Query: 157 MQPRVRIHADP--SPDLDEFDRLPDSLVLLILNKVADVRSLGRCAAVSRRFNMLVPLVHD 330
           M P+ RIHADP    ++D+FD LPDSLVLLILNKV DVRSLGRC+A S+RF  LVPLVHD
Sbjct: 1   MLPKARIHADPVLEFEVDQFDCLPDSLVLLILNKVEDVRSLGRCSAASKRFYGLVPLVHD 60

Query: 331 IYVKIDRVVTVDGDSDEGMNPSSPKP 408
           + VKIDRVVTVDGDS++ +N SSPKP
Sbjct: 61  VCVKIDRVVTVDGDSEDPLNLSSPKP 86


>gb|ACG44263.1| F-box domain containing protein [Zea mays]
          Length = 354

 Score =  367 bits (943), Expect = 4e-99
 Identities = 180/228 (78%), Positives = 204/228 (89%), Gaps = 1/228 (0%)
 Frame = +1

Query: 577  QVLKNFTHVRNLKIELPAGDVGTEDGVLLKWRAEFGSTLQNCVILGGTRIDCNPTT-DQE 753
            QVL+NFTH+RNL+IELP+GDVGTE+GVLLKWRAE+GSTLQ+CVILGGTR+D  P   + E
Sbjct: 127  QVLRNFTHIRNLRIELPSGDVGTEEGVLLKWRAEYGSTLQSCVILGGTRVDRKPVGGEHE 186

Query: 754  PSVEDNGSIPESFYTNGGLKLRVVWTISSMIAASTRHYLLHPVIKDHPTLRSLVLIDADG 933
             S+EDNGS+PESFYTNGGLKLRVVWTISS+IAASTRHYLL  +I DHPTL SLVL DADG
Sbjct: 187  QSLEDNGSMPESFYTNGGLKLRVVWTISSLIAASTRHYLLRSIINDHPTLLSLVLTDADG 246

Query: 934  QGTLSMGVDQLKDFREKPLSASASSNRTQIPASSMKLRYAPYLELPGGMGVQGATLVVIK 1113
            QGTL MG +QLK+FRE  LSASA SNRTQ+PA +MKL+YAPYLELPGGM +QGATLV IK
Sbjct: 247  QGTLCMGAEQLKEFRENQLSASACSNRTQVPACNMKLKYAPYLELPGGMALQGATLVAIK 306

Query: 1114 PSSEGSNGNNISRKETDAFVFGAFDGPFNSAVKALMKRRTYLLEMNGF 1257
            PS +GSNG++ +RKE DAFVFGAFDGPF +AVKALMKRRTYLLEMNGF
Sbjct: 307  PSPDGSNGSHPNRKEADAFVFGAFDGPFKAAVKALMKRRTYLLEMNGF 354



 Score =  125 bits (313), Expect = 4e-26
 Identities = 61/84 (72%), Positives = 70/84 (83%)
 Frame = +1

Query: 157 MQPRVRIHADPSPDLDEFDRLPDSLVLLILNKVADVRSLGRCAAVSRRFNMLVPLVHDIY 336
           M P+ RIHADP  ++D FD LPDSLVLLILNKV DVRSLGRC AVS+R   LVPLVHD+Y
Sbjct: 1   MHPKARIHADPVREVDHFDCLPDSLVLLILNKVEDVRSLGRCYAVSKRLCGLVPLVHDVY 60

Query: 337 VKIDRVVTVDGDSDEGMNPSSPKP 408
           VKIDRVV VDGD+++ +N SSPKP
Sbjct: 61  VKIDRVVAVDGDAEDALNLSSPKP 84


>ref|NP_001055899.2| Os05g0490300 [Oryza sativa Japonica Group]
            gi|255676456|dbj|BAF17813.2| Os05g0490300, partial [Oryza
            sativa Japonica Group]
          Length = 450

 Score =  367 bits (942), Expect = 5e-99
 Identities = 181/228 (79%), Positives = 202/228 (88%), Gaps = 1/228 (0%)
 Frame = +1

Query: 577  QVLKNFTHVRNLKIELPAGDVGTEDGVLLKWRAEFGSTLQNCVILGGTRIDCNPT-TDQE 753
            QVL+NFTH+RNL++ELP+GDVGTE+GVLLKWRAE+GSTLQNCVILGGT++D  P   + E
Sbjct: 223  QVLRNFTHIRNLRVELPSGDVGTEEGVLLKWRAEYGSTLQNCVILGGTQVDRKPVGAEHE 282

Query: 754  PSVEDNGSIPESFYTNGGLKLRVVWTISSMIAASTRHYLLHPVIKDHPTLRSLVLIDADG 933
               EDNGS+PESFYTNGGLKLRVVWTISS+IAASTRHYLL  +IKDHPTL SLVL DADG
Sbjct: 283  LYSEDNGSMPESFYTNGGLKLRVVWTISSLIAASTRHYLLRSIIKDHPTLTSLVLTDADG 342

Query: 934  QGTLSMGVDQLKDFREKPLSASASSNRTQIPASSMKLRYAPYLELPGGMGVQGATLVVIK 1113
            QGTLSMG +QLK+FRE  LSASA SNRTQ+PA +MKL+YAPYLELPGG+ +QGATLV IK
Sbjct: 343  QGTLSMGAEQLKEFRENQLSASACSNRTQVPACNMKLKYAPYLELPGGIALQGATLVAIK 402

Query: 1114 PSSEGSNGNNISRKETDAFVFGAFDGPFNSAVKALMKRRTYLLEMNGF 1257
            PS EGSNG + SRKETDAFV GAFDGPF  AVKALMKRRTYLLEMNGF
Sbjct: 403  PSPEGSNGGHTSRKETDAFVSGAFDGPFKFAVKALMKRRTYLLEMNGF 450



 Score =  125 bits (315), Expect = 2e-26
 Identities = 60/82 (73%), Positives = 71/82 (86%)
 Frame = +1

Query: 163 PRVRIHADPSPDLDEFDRLPDSLVLLILNKVADVRSLGRCAAVSRRFNMLVPLVHDIYVK 342
           P  RIHADP  + D+FDRLPDSLVL+ILN V DVRSLGRC+AVS+RF  LVPLVHD+YVK
Sbjct: 99  PMARIHADPVLEADQFDRLPDSLVLVILNNVEDVRSLGRCSAVSKRFYGLVPLVHDVYVK 158

Query: 343 IDRVVTVDGDSDEGMNPSSPKP 408
           IDRVVTVDG++++ +N SSPKP
Sbjct: 159 IDRVVTVDGEAEDALNLSSPKP 180


>gb|AAT69637.1| unknown protein, contains f-box domain [Oryza sativa Japonica Group]
            gi|125552803|gb|EAY98512.1| hypothetical protein
            OsI_20423 [Oryza sativa Indica Group]
            gi|215701287|dbj|BAG92711.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222632054|gb|EEE64186.1|
            hypothetical protein OsJ_19018 [Oryza sativa Japonica
            Group]
          Length = 351

 Score =  367 bits (942), Expect = 5e-99
 Identities = 181/228 (79%), Positives = 202/228 (88%), Gaps = 1/228 (0%)
 Frame = +1

Query: 577  QVLKNFTHVRNLKIELPAGDVGTEDGVLLKWRAEFGSTLQNCVILGGTRIDCNPT-TDQE 753
            QVL+NFTH+RNL++ELP+GDVGTE+GVLLKWRAE+GSTLQNCVILGGT++D  P   + E
Sbjct: 124  QVLRNFTHIRNLRVELPSGDVGTEEGVLLKWRAEYGSTLQNCVILGGTQVDRKPVGAEHE 183

Query: 754  PSVEDNGSIPESFYTNGGLKLRVVWTISSMIAASTRHYLLHPVIKDHPTLRSLVLIDADG 933
               EDNGS+PESFYTNGGLKLRVVWTISS+IAASTRHYLL  +IKDHPTL SLVL DADG
Sbjct: 184  LYSEDNGSMPESFYTNGGLKLRVVWTISSLIAASTRHYLLRSIIKDHPTLTSLVLTDADG 243

Query: 934  QGTLSMGVDQLKDFREKPLSASASSNRTQIPASSMKLRYAPYLELPGGMGVQGATLVVIK 1113
            QGTLSMG +QLK+FRE  LSASA SNRTQ+PA +MKL+YAPYLELPGG+ +QGATLV IK
Sbjct: 244  QGTLSMGAEQLKEFRENQLSASACSNRTQVPACNMKLKYAPYLELPGGIALQGATLVAIK 303

Query: 1114 PSSEGSNGNNISRKETDAFVFGAFDGPFNSAVKALMKRRTYLLEMNGF 1257
            PS EGSNG + SRKETDAFV GAFDGPF  AVKALMKRRTYLLEMNGF
Sbjct: 304  PSPEGSNGGHTSRKETDAFVSGAFDGPFKFAVKALMKRRTYLLEMNGF 351



 Score =  123 bits (309), Expect = 1e-25
 Identities = 59/79 (74%), Positives = 70/79 (88%)
 Frame = +1

Query: 172 RIHADPSPDLDEFDRLPDSLVLLILNKVADVRSLGRCAAVSRRFNMLVPLVHDIYVKIDR 351
           RIHADP  + D+FDRLPDSLVL+ILN V DVRSLGRC+AVS+RF  LVPLVHD+YVKIDR
Sbjct: 3   RIHADPVLEADQFDRLPDSLVLVILNNVEDVRSLGRCSAVSKRFYGLVPLVHDVYVKIDR 62

Query: 352 VVTVDGDSDEGMNPSSPKP 408
           VVTVDG++++ +N SSPKP
Sbjct: 63  VVTVDGEAEDALNLSSPKP 81


Top