BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006061
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD16204.1| putative cockayne syndrome 1 homolog [Oryza sati...   340   e-122
ref|XP_002456663.1| hypothetical protein SORBIDRAFT_03g040420 [S...   345   e-122
ref|XP_003564656.1| PREDICTED: DNA excision repair protein ERCC-...   338   e-120
dbj|BAJ96940.1| predicted protein [Hordeum vulgare subsp. vulgare]    332   e-119
ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-...   332   e-118

>dbj|BAD16204.1| putative cockayne syndrome 1 homolog [Oryza sativa Japonica Group]
            gi|48716894|dbj|BAD23590.1| putative cockayne syndrome 1
            homolog [Oryza sativa Japonica Group]
          Length = 453

 Score =  340 bits (873), Expect(2) = e-122
 Identities = 174/265 (65%), Positives = 203/265 (76%), Gaps = 4/265 (1%)
 Frame = -3

Query: 1016 MSLEWSASSEWILMTGGCDGAIRFWDIRRAGCFLVLDQSRSQLGRRPPLSTNTVKKGLTS 837
            MSLEWS SSEWILM+GGCDGAIRFWDIRRAGCFLVLDQSRSQLGRRPP    T  K   +
Sbjct: 194  MSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLVLDQSRSQLGRRPPFLEGTSDKDPLN 253

Query: 836  RMASSGQYSAKGLVSQRKSSLGNTMKQLPSLRKGHFLSKGSTVQRLHPGMTSGQNRATAH 657
             +  S   S+K   +Q+++  G + KQ   L K      G   QRLHPG++S QNRATAH
Sbjct: 254  SLQPSS--SSKIYSAQQRT--GKSKKQSHKLHKSQIPGHGHIQQRLHPGLSSSQNRATAH 309

Query: 656  YGAVTGLKATGDGMYLISSGSDSRLRLWDIESGCNTLVNFEAMRLQTSKGMKLAVNDDSS 477
            YGAVTGL+ T DGMYL+SSGSDSRLRLWDI+SGCNTLVNFEAMRLQTSK ++LAV +D S
Sbjct: 310  YGAVTGLRTTTDGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTSKPLQLAVTEDPS 369

Query: 476  LVFTPCMATVKAYDVWSGTVKKTFHGHYESVNCCHFSSLDQELYTGSNDRQILVWSTPFS 297
            LVF PCMA++KAY++WSG   +TF GHYE VNCC++S+ +QELYTGSNDRQILVWS P +
Sbjct: 370  LVFIPCMASIKAYNLWSGMTFQTFRGHYEPVNCCYYSAQEQELYTGSNDRQILVWS-PST 428

Query: 296  AAFE--EQDGKKVCS--TDQDNWSD 234
             AF   E DGK+      D+DNWSD
Sbjct: 429  PAFTEMEDDGKRQMDFVVDEDNWSD 453



 Score =  125 bits (314), Expect(2) = e-122
 Identities = 61/71 (85%), Positives = 62/71 (87%)
 Frame = -1

Query: 1291 VTGSLDHHVKVWDTNSVQVVMDFKMPGKVYGMAMSAIATTHMLIAAGSEDVQVRLCDIAS 1112
            VT S D +VKVWDTNS QVVMDFKMPGKVY  AMS IATTHMLIA GS DVQVRLCDIAS
Sbjct: 120  VTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIAS 179

Query: 1111 GAFTHTLSGHR 1079
            GAFTHTLSGHR
Sbjct: 180  GAFTHTLSGHR 190


>ref|XP_002456663.1| hypothetical protein SORBIDRAFT_03g040420 [Sorghum bicolor]
            gi|241928638|gb|EES01783.1| hypothetical protein
            SORBIDRAFT_03g040420 [Sorghum bicolor]
          Length = 450

 Score =  345 bits (885), Expect(2) = e-122
 Identities = 174/263 (66%), Positives = 201/263 (76%), Gaps = 2/263 (0%)
 Frame = -3

Query: 1016 MSLEWSASSEWILMTGGCDGAIRFWDIRRAGCFLVLDQSRSQLGRRPPLSTNTVKKGLTS 837
            MSLEWSASSEWILM+GGCDGAIRFWDIRRAGCF VLDQSRSQLG+RPPL  + V    T 
Sbjct: 194  MSLEWSASSEWILMSGGCDGAIRFWDIRRAGCFQVLDQSRSQLGKRPPLVKSAVDNDHTD 253

Query: 836  RMASSGQYSAKGLVSQRKSSLGNTMKQLPSLRKGHFLSKGSTVQRLHPGMTSGQNRATAH 657
             +  S   S + L  +R    G + K  P+LRK   L+ G   QRLHPG++S QNRATAH
Sbjct: 254  SLGPSP--STRSLAQKRA---GISKKSSPALRKIQNLTHGQMQQRLHPGLSSSQNRATAH 308

Query: 656  YGAVTGLKATGDGMYLISSGSDSRLRLWDIESGCNTLVNFEAMRLQTSKGMKLAVNDDSS 477
            YGAVTGL+ T DGMYL+SSGSDSRLRLWDI+SGCNTLVNFEAMRLQT K ++LAV  D S
Sbjct: 309  YGAVTGLRTTTDGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTGKPLQLAVTKDPS 368

Query: 476  LVFTPCMATVKAYDVWSGTVKKTFHGHYESVNCCHFSSLDQELYTGSNDRQILVWSTPFS 297
            LVF PCMA++KAY++WSGT  +TF GHYE VNCC++S  DQELYTG NDRQILVW TP +
Sbjct: 369  LVFVPCMASIKAYNLWSGTTFRTFRGHYELVNCCYYSEQDQELYTGGNDRQILVW-TPST 427

Query: 296  AAFEEQD--GKKVCSTDQDNWSD 234
             AF E +   K +   D+DNWSD
Sbjct: 428  PAFTEMEDHDKTLSGADEDNWSD 450



 Score =  120 bits (300), Expect(2) = e-122
 Identities = 57/71 (80%), Positives = 61/71 (85%)
 Frame = -1

Query: 1291 VTGSLDHHVKVWDTNSVQVVMDFKMPGKVYGMAMSAIATTHMLIAAGSEDVQVRLCDIAS 1112
            VT S D +VKVWDTNS QVVM+FKMPGKVY  AMS +ATTHMLI  G+ DVQVRLCDIAS
Sbjct: 120  VTASFDQYVKVWDTNSTQVVMEFKMPGKVYTAAMSPVATTHMLIGTGTADVQVRLCDIAS 179

Query: 1111 GAFTHTLSGHR 1079
            GAFTHTLSGHR
Sbjct: 180  GAFTHTLSGHR 190


>ref|XP_003564656.1| PREDICTED: DNA excision repair protein ERCC-8-like isoform 2
            [Brachypodium distachyon]
          Length = 452

 Score =  338 bits (866), Expect(2) = e-120
 Identities = 170/266 (63%), Positives = 199/266 (74%), Gaps = 5/266 (1%)
 Frame = -3

Query: 1016 MSLEWSASSEWILMTGGCDGAIRFWDIRRAGCFLVLDQSRSQLGRRPPLSTNTVK--KGL 843
            MSLEWS SSEWILM+GGCDGAIRFWDIRRAGCFL LDQSRSQLGRRPP    T++  K  
Sbjct: 194  MSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLALDQSRSQLGRRPPFLDRTIEDHKNT 253

Query: 842  TSRMASSGQYSAKGLVSQRKSSLGNTMKQLPSLRKGHFLSKGSTVQRLHPGMTSGQNRAT 663
                 SS  YS    V QR    GN  KQ  +L +    ++G   QR+HPGM+S QNR  
Sbjct: 254  LGPSTSSKNYS----VQQRT---GNRKKQSKTLHRSQTPTRGHVQQRVHPGMSSSQNRTI 306

Query: 662  AHYGAVTGLKATGDGMYLISSGSDSRLRLWDIESGCNTLVNFEAMRLQTSKGMKLAVNDD 483
            AHYGA+TGLK T DGM+L+SSGSDSRL+LWDI+SGCNTLVNFEA RLQTSK ++LAV +D
Sbjct: 307  AHYGAITGLKTTTDGMHLLSSGSDSRLKLWDIDSGCNTLVNFEATRLQTSKPLQLAVTED 366

Query: 482  SSLVFTPCMATVKAYDVWSGTVKKTFHGHYESVNCCHFSSLDQELYTGSNDRQILVWSTP 303
             SLVF PCMA++KAY++WSGT+ +TF GHY+ VNCC++SS DQELYTGSNDRQILVWS  
Sbjct: 367  PSLVFVPCMASIKAYNIWSGTMFQTFRGHYDDVNCCYYSSQDQELYTGSNDRQILVWSPS 426

Query: 302  FSAAFEEQDGKK---VCSTDQDNWSD 234
              A  E +D +K     + D DNWSD
Sbjct: 427  TPAFTEMEDDEKPQGFFAADVDNWSD 452



 Score =  122 bits (307), Expect(2) = e-120
 Identities = 60/70 (85%), Positives = 61/70 (87%)
 Frame = -1

Query: 1291 VTGSLDHHVKVWDTNSVQVVMDFKMPGKVYGMAMSAIATTHMLIAAGSEDVQVRLCDIAS 1112
            VT S D +VKVWDTNS QVVMDFKMPGKVY  AMS IATTHMLIA GS DVQVRLCDIAS
Sbjct: 120  VTASFDTYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIAS 179

Query: 1111 GAFTHTLSGH 1082
            GAFTHTLSGH
Sbjct: 180  GAFTHTLSGH 189


>dbj|BAJ96940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 452

 Score =  332 bits (850), Expect(2) = e-119
 Identities = 167/266 (62%), Positives = 200/266 (75%), Gaps = 5/266 (1%)
 Frame = -3

Query: 1016 MSLEWSASSEWILMTGGCDGAIRFWDIRRAGCFLVLDQSRSQLGRRPPLSTNTVKKGLTS 837
            MSLEWS SSEWIL++GG DGAIRFWDIRRAGCFLVLDQ RSQLGRRPP+   T+      
Sbjct: 194  MSLEWSTSSEWILISGGFDGAIRFWDIRRAGCFLVLDQLRSQLGRRPPVLDTTMDNDQKK 253

Query: 836  --RMASSGQYSAKGLVSQRKSSLGNTMKQLPSLRKGHFLSKGSTVQRLHPGMTSGQNRAT 663
              R +SS  YS +   + RK       KQ  +L K   + +G T Q++HPGM+S QN  T
Sbjct: 254  LGRSSSSKSYSVQQRTANRK-------KQSKALHKSLTMVRGHTQQKMHPGMSSSQNHKT 306

Query: 662  AHYGAVTGLKATGDGMYLISSGSDSRLRLWDIESGCNTLVNFEAMRLQTSKGMKLAVNDD 483
            AHYGAVTGL+ T DGM+L+SSGSDSRLRLWDI+SGCNTLVNFEAMRLQTSK ++LAV DD
Sbjct: 307  AHYGAVTGLRTTTDGMHLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTSKPLQLAVTDD 366

Query: 482  SSLVFTPCMATVKAYDVWSGTVKKTFHGHYESVNCCHFSSLDQELYTGSNDRQILVW--S 309
             SLVF PCM+++KAY+ WSGT  +TF GHY+ VNCC+++S DQELYTGSNDRQILVW  S
Sbjct: 367  PSLVFIPCMSSIKAYNTWSGTTFQTFRGHYDHVNCCYYNSQDQELYTGSNDRQILVWSPS 426

Query: 308  TPFSAAFEEQDGKKV-CSTDQDNWSD 234
            TP     E+ D ++   + D+DNWSD
Sbjct: 427  TPVLTEMEDDDKRQEGFAADEDNWSD 452



 Score =  124 bits (310), Expect(2) = e-119
 Identities = 60/70 (85%), Positives = 62/70 (88%)
 Frame = -1

Query: 1291 VTGSLDHHVKVWDTNSVQVVMDFKMPGKVYGMAMSAIATTHMLIAAGSEDVQVRLCDIAS 1112
            VT S D++VKVWDTNS QVVMDFKMPGKVY  AMS IATTHMLIA GS DVQVRLCDIAS
Sbjct: 120  VTASFDNYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIAS 179

Query: 1111 GAFTHTLSGH 1082
            GAFTHTLSGH
Sbjct: 180  GAFTHTLSGH 189


>ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-8-like [Cucumis sativus]
            gi|449482714|ref|XP_004156381.1| PREDICTED: DNA excision
            repair protein ERCC-8-like [Cucumis sativus]
          Length = 446

 Score =  332 bits (850), Expect(2) = e-118
 Identities = 170/263 (64%), Positives = 202/263 (76%), Gaps = 2/263 (0%)
 Frame = -3

Query: 1016 MSLEWSASSEWILMTGGCDGAIRFWDIRRAGCFLVLDQSRSQLGRRPPLSTNTVKKGLTS 837
            MS+EWSASSEW+L+TGGCDGAIRFWDIRRAGCF VLDQS+SQLGRRPP+S  T  K  TS
Sbjct: 192  MSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKLSTS 251

Query: 836  R--MASSGQYSAKGLVSQRKSSLGNTMKQLPSLRKGHFLSKGSTVQRLHPGMTSGQNRAT 663
            +  +AS G  + K  +  +K + GN  K  PS   G   +KGST QRLHPG+ SGQ+RA 
Sbjct: 252  KSLLASQGS-NMKSRIPHKKLTNGNATK--PS-STGKLPAKGSTRQRLHPGLLSGQDRAV 307

Query: 662  AHYGAVTGLKATGDGMYLISSGSDSRLRLWDIESGCNTLVNFEAMRLQTSKGMKLAVNDD 483
            +HYGAVTGLK TGDGMYL+S+GSDSRL+LWD+ESGCNTLVNFE +RLQT+K ++LA + D
Sbjct: 308  SHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNKPLQLATSQD 367

Query: 482  SSLVFTPCMATVKAYDVWSGTVKKTFHGHYESVNCCHFSSLDQELYTGSNDRQILVWSTP 303
            SSLVF PCMATVKA+D+W+G    TF GHYE VNCC ++  DQELYTG NDRQILVWS  
Sbjct: 368  SSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP- 426

Query: 302  FSAAFEEQDGKKVCSTDQDNWSD 234
             S    E D +   + D+DNWSD
Sbjct: 427  -SQNSTELDWES--TADKDNWSD 446



 Score =  122 bits (307), Expect(2) = e-118
 Identities = 55/71 (77%), Positives = 66/71 (92%)
 Frame = -1

Query: 1291 VTGSLDHHVKVWDTNSVQVVMDFKMPGKVYGMAMSAIATTHMLIAAGSEDVQVRLCDIAS 1112
            VTGS DHH+ VWDTN+ QVV++FK+PGKVY  AMS++AT+HMLIAAG+EDVQVRLCDI+S
Sbjct: 118  VTGSFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISS 177

Query: 1111 GAFTHTLSGHR 1079
            GAF+HTLSGHR
Sbjct: 178  GAFSHTLSGHR 188