BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006014
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001146968.1| ribosomal protein S24 [Zea mays] gi|19560595...   225   1e-56
ref|XP_002453563.1| hypothetical protein SORBIDRAFT_04g008130 [S...   224   2e-56
ref|NP_001046358.1| Os02g0229000 [Oryza sativa Japonica Group] g...   222   7e-56
ref|XP_002315773.1| predicted protein [Populus trichocarpa] gi|2...   221   2e-55
gb|ABK93908.1| unknown [Populus trichocarpa]                          221   2e-55

>ref|NP_001146968.1| ribosomal protein S24 [Zea mays] gi|195605952|gb|ACG24806.1| 40S
           ribosomal protein S24 [Zea mays]
           gi|195608026|gb|ACG25843.1| 40S ribosomal protein S24
           [Zea mays] gi|238013252|gb|ACR37661.1| unknown [Zea
           mays] gi|413936689|gb|AFW71240.1| 40S ribosomal protein
           S24 [Zea mays]
          Length = 137

 Score =  225 bits (573), Expect = 1e-56
 Identities = 113/126 (89%), Positives = 121/126 (96%), Gaps = 1/126 (0%)
 Frame = +1

Query: 100 MADTKL-PAFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKIYEVKDENS 276
           MADTK  PA T+RTRKFMTNRLLSRKQFV++VLHPGRANVSKAELK++LAK+YEVKD N 
Sbjct: 1   MADTKASPAVTLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKAELKERLAKMYEVKDPNC 60

Query: 277 IFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKVEKSRKQLKERKNRA 456
           IFVFKFRTHFGGGKSTGFGLIYD+VDSAKKFEPKYRLIRNGLATKVEKSRKQ+KERKNRA
Sbjct: 61  IFVFKFRTHFGGGKSTGFGLIYDNVDSAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRA 120

Query: 457 KKIRGV 474
           KKIRGV
Sbjct: 121 KKIRGV 126


>ref|XP_002453563.1| hypothetical protein SORBIDRAFT_04g008130 [Sorghum bicolor]
           gi|241933394|gb|EES06539.1| hypothetical protein
           SORBIDRAFT_04g008130 [Sorghum bicolor]
          Length = 137

 Score =  224 bits (570), Expect = 2e-56
 Identities = 112/126 (88%), Positives = 121/126 (96%), Gaps = 1/126 (0%)
 Frame = +1

Query: 100 MADTK-LPAFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKIYEVKDENS 276
           MAD K LPA T+RTRKFMTNRLL+RKQFV++VLHPGRANVSKAELK+KLAK+YEVKD N 
Sbjct: 1   MADAKVLPAVTLRTRKFMTNRLLARKQFVLEVLHPGRANVSKAELKEKLAKMYEVKDPNC 60

Query: 277 IFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKVEKSRKQLKERKNRA 456
           IFVFKFRTHFGGGKSTGFGLIYD++DSAKKFEPKYRLIRNGLATKVEKSRKQ+KERKNRA
Sbjct: 61  IFVFKFRTHFGGGKSTGFGLIYDNLDSAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRA 120

Query: 457 KKIRGV 474
           KKIRGV
Sbjct: 121 KKIRGV 126


>ref|NP_001046358.1| Os02g0229000 [Oryza sativa Japonica Group] gi|313103650|pdb|3IZ6|U
           Chain U, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|49388688|dbj|BAD25872.1|
           putative 40S ribosomal protein S24 [Oryza sativa
           Japonica Group] gi|49388938|dbj|BAD26158.1| putative 40S
           ribosomal protein S24 [Oryza sativa Japonica Group]
           gi|113535889|dbj|BAF08272.1| Os02g0229000 [Oryza sativa
           Japonica Group] gi|125538701|gb|EAY85096.1| hypothetical
           protein OsI_06448 [Oryza sativa Indica Group]
          Length = 138

 Score =  222 bits (566), Expect = 7e-56
 Identities = 110/126 (87%), Positives = 121/126 (96%), Gaps = 1/126 (0%)
 Frame = +1

Query: 100 MADTKL-PAFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKIYEVKDENS 276
           MADTK  PA T+RTRKFMTNRLLSRKQFV++VLHPGRANVSKA+LK+KLAK+YEVKD N 
Sbjct: 1   MADTKTAPAVTLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNC 60

Query: 277 IFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKVEKSRKQLKERKNRA 456
           IFVFKFRTHFGGGKSTGFGLIYD++D+AKK+EPKYRLIRNGLATKVEKSRKQ+KERKNRA
Sbjct: 61  IFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRA 120

Query: 457 KKIRGV 474
           KKIRGV
Sbjct: 121 KKIRGV 126


>ref|XP_002315773.1| predicted protein [Populus trichocarpa] gi|222864813|gb|EEF01944.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  221 bits (562), Expect = 2e-55
 Identities = 109/118 (92%), Positives = 115/118 (97%)
 Frame = +1

Query: 121 AFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKIYEVKDENSIFVFKFRT 300
           A TIRTRKFMTNRLLSRKQF+IDVLHPGRANVSKAELK+KLA +YEVKD NSIFVFKFRT
Sbjct: 5   AVTIRTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLASLYEVKDPNSIFVFKFRT 64

Query: 301 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKVEKSRKQLKERKNRAKKIRGV 474
           HFGGGKSTGFGLIYDSV+SAKK+EPKYRLIRNGLATKVEKSRKQLKERKNRAKK+RGV
Sbjct: 65  HFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLATKVEKSRKQLKERKNRAKKVRGV 122


>gb|ABK93908.1| unknown [Populus trichocarpa]
          Length = 134

 Score =  221 bits (562), Expect = 2e-55
 Identities = 109/118 (92%), Positives = 115/118 (97%)
 Frame = +1

Query: 121 AFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKIYEVKDENSIFVFKFRT 300
           A TIRTRKFMTNRLLSRKQF+IDVLHPGRANVSKAELK+KLA +YEVKD NSIFVFKFRT
Sbjct: 5   AVTIRTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLASLYEVKDPNSIFVFKFRT 64

Query: 301 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKVEKSRKQLKERKNRAKKIRGV 474
           HFGGGKSTGFGLIYDSV+SAKK+EPKYRLIRNGLATKVEKSRKQLKERKNRAKK+RGV
Sbjct: 65  HFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLATKVEKSRKQLKERKNRAKKVRGV 122