BLASTX nr result

ID: Dioscorea21_contig00006013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006013
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21194.1| unknown [Picea sitchensis] gi|116791622|gb|ABK260...   136   7e-30
gb|ABK21285.1| unknown [Picea sitchensis] gi|148909420|gb|ABR178...   133   6e-29
gb|ACF06628.1| structural constituent of ribosome [Elaeis guinee...   132   8e-29
ref|NP_001146968.1| ribosomal protein S24 [Zea mays] gi|19560595...   132   1e-28
ref|NP_001240176.1| uncharacterized protein LOC100802918 [Glycin...   131   2e-28

>gb|ABK21194.1| unknown [Picea sitchensis] gi|116791622|gb|ABK26045.1| unknown
           [Picea sitchensis]
          Length = 136

 Score =  136 bits (342), Expect = 7e-30
 Identities = 78/125 (62%), Positives = 82/125 (65%)
 Frame = +1

Query: 103 MAETKAFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKMYEVXXXXXXXX 282
           MA+ KA T+RTRKFMTNRLLSRKQFVIDVLHPGR NVSKAELK+KLAK+YEV        
Sbjct: 1   MADAKAVTVRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLAKLYEV----RDPQ 56

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPKYRLIRNGLATKVEKSRKQMKERKNR 462
                                           EPKYRLIRNGLATKVEKSRKQMKERKNR
Sbjct: 57  TIFVFGFRTQFGGGKSSGFGLIYDSLEHAKKYEPKYRLIRNGLATKVEKSRKQMKERKNR 116

Query: 463 AKKIR 477
           AKKIR
Sbjct: 117 AKKIR 121


>gb|ABK21285.1| unknown [Picea sitchensis] gi|148909420|gb|ABR17808.1| unknown
           [Picea sitchensis] gi|224285786|gb|ACN40608.1| unknown
           [Picea sitchensis]
          Length = 136

 Score =  133 bits (334), Expect = 6e-29
 Identities = 76/125 (60%), Positives = 81/125 (64%)
 Frame = +1

Query: 103 MAETKAFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKMYEVXXXXXXXX 282
           MA+ KA T+RTRKFMTNRLL+RKQFVIDVLHPGR NVSKAELK+KLAK+YEV        
Sbjct: 1   MADAKAVTVRTRKFMTNRLLARKQFVIDVLHPGRPNVSKAELKEKLAKLYEV----RDPQ 56

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPKYRLIRNGLATKVEKSRKQMKERKNR 462
                                           EPKYRLIRNGL TKVEKSRKQMKERKNR
Sbjct: 57  SIFVFGFRTQFGGGKSSGFGLIYDTLECAKKYEPKYRLIRNGLETKVEKSRKQMKERKNR 116

Query: 463 AKKIR 477
           AKKIR
Sbjct: 117 AKKIR 121


>gb|ACF06628.1| structural constituent of ribosome [Elaeis guineensis]
          Length = 137

 Score =  132 bits (333), Expect = 8e-29
 Identities = 79/125 (63%), Positives = 82/125 (65%)
 Frame = +1

Query: 103 MAETKAFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKMYEVXXXXXXXX 282
           MAE KA TIRTRKFMTNRLLSR+QFVIDVLHPGRANVSKAELKDKLA +YEV        
Sbjct: 1   MAE-KAVTIRTRKFMTNRLLSRRQFVIDVLHPGRANVSKAELKDKLATLYEV----KDPN 55

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPKYRLIRNGLATKVEKSRKQMKERKNR 462
                                           EPKYRLIRNGLATKVEKSRKQMKERKNR
Sbjct: 56  TIFVFKFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLATKVEKSRKQMKERKNR 115

Query: 463 AKKIR 477
           AKK+R
Sbjct: 116 AKKVR 120


>ref|NP_001146968.1| ribosomal protein S24 [Zea mays] gi|195605952|gb|ACG24806.1| 40S
           ribosomal protein S24 [Zea mays]
           gi|195608026|gb|ACG25843.1| 40S ribosomal protein S24
           [Zea mays] gi|238013252|gb|ACR37661.1| unknown [Zea
           mays] gi|413936689|gb|AFW71240.1| 40S ribosomal protein
           S24 [Zea mays]
          Length = 137

 Score =  132 bits (331), Expect = 1e-28
 Identities = 78/128 (60%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
 Frame = +1

Query: 103 MAETKA---FTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKMYEVXXXXX 273
           MA+TKA    T+RTRKFMTNRLLSRKQFV++VLHPGRANVSKAELK++LAKMYEV     
Sbjct: 1   MADTKASPAVTLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKAELKERLAKMYEV----K 56

Query: 274 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPKYRLIRNGLATKVEKSRKQMKER 453
                                              EPKYRLIRNGLATKVEKSRKQMKER
Sbjct: 57  DPNCIFVFKFRTHFGGGKSTGFGLIYDNVDSAKKFEPKYRLIRNGLATKVEKSRKQMKER 116

Query: 454 KNRAKKIR 477
           KNRAKKIR
Sbjct: 117 KNRAKKIR 124


>ref|NP_001240176.1| uncharacterized protein LOC100802918 [Glycine max]
           gi|255637268|gb|ACU18964.1| unknown [Glycine max]
          Length = 137

 Score =  131 bits (330), Expect = 2e-28
 Identities = 76/121 (62%), Positives = 79/121 (65%)
 Frame = +1

Query: 115 KAFTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLAKMYEVXXXXXXXXXXXX 294
           KA TIRTRKFMTNRLLSRKQFV+DVLHPGRANVSKAELK+KLA+MYEV            
Sbjct: 4   KAVTIRTRKFMTNRLLSRKQFVVDVLHPGRANVSKAELKEKLARMYEV----KDPNTVFV 59

Query: 295 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEPKYRLIRNGLATKVEKSRKQMKERKNRAKKI 474
                                       EPKYRLIRNGL TKVEKSRKQMKERKNRAKKI
Sbjct: 60  FKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKI 119

Query: 475 R 477
           R
Sbjct: 120 R 120


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