BLASTX nr result

ID: Dioscorea21_contig00006011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006011
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex...   497   e-138
ref|XP_002304616.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131
gb|EEC71199.1| hypothetical protein OsI_03108 [Oryza sativa Indi...   473   e-131
gb|ADM64536.1| Arp2/3 complex p35 subunit [Nicotiana tabacum]         472   e-131
ref|XP_002461563.1| hypothetical protein SORBIDRAFT_02g004770 [S...   469   e-130

>ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex subunit 2 isoform 1
            [Vitis vinifera] gi|297737660|emb|CBI26861.3| unnamed
            protein product [Vitis vinifera]
          Length = 328

 Score =  497 bits (1279), Expect = e-138
 Identities = 256/350 (73%), Positives = 288/350 (82%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1123 MILLQSPSRFLLQILQNRVRNLDKGIDLDCHSVEFDDVRYHIQVSMKAPQSMVLSMALPA 944
            MILLQSPSRFLLQ L NRV+NL+KG++LD   VEFDDVRYH+QVSMK PQ ++LS++LP 
Sbjct: 1    MILLQSPSRFLLQTLLNRVQNLEKGVELDYQWVEFDDVRYHVQVSMKYPQFLLLSVSLPT 60

Query: 943  PPPEAIFYGGLPFGAIEAIKGAFGMIVQILDPPKDGYNLTMKINLGKLPPDEXXXXXXXX 764
            P  EA+F GGLPFGAIEAIK ++G++VQILDPPKDG+NLT+K+NL KLPPDE        
Sbjct: 61   PAQEAVFSGGLPFGAIEAIKASYGVLVQILDPPKDGFNLTLKLNLSKLPPDE-------- 112

Query: 763  XXXXXXXXXXXXXXXXXXEKKQALLVKIASVREVVLGAPLKVVLKHLSSRTVASDADGPI 584
                              E K ALLVKIASVREVVLGAPL+VVLKHL+SRTVA D + P 
Sbjct: 113  ------------------EYKHALLVKIASVREVVLGAPLRVVLKHLASRTVAPDINRPF 154

Query: 583  ALVHRPKESFFLVPQAEKVTVVFPMRFQDSVDIVLATSFLQEFVDARRSPGLNNAPPCMW 404
            ALVHRPKESFFLVPQAEKVTVVFPMRF+DS+D VLATSFLQEFV+ARR+ GLNNAPPC+W
Sbjct: 155  ALVHRPKESFFLVPQAEKVTVVFPMRFKDSIDTVLATSFLQEFVEARRTAGLNNAPPCLW 214

Query: 403  SLSPPPELKGVPPHALTANAGFVKFVIFPRHVEGRKLDKTVWSLSTFHAYVSYHVKCSEA 224
            S SPP EL+G    AL+ANAGFV FVIFPRHVEG+KLD+TVWSLSTF AYVSYHVKCSE 
Sbjct: 215  SPSPPLELRGTAGEALSANAGFVTFVIFPRHVEGKKLDRTVWSLSTFRAYVSYHVKCSEG 274

Query: 223  FMHTRMRRRVESLIQALDRAKPGNEKS-KLLQGKSFKRLSLKDRHNNSNS 77
            FMHTRMRRRVESLIQALDRAKP  EKS K +QG+SFKRLSLK+ H NSNS
Sbjct: 275  FMHTRMRRRVESLIQALDRAKPDLEKSKKTVQGRSFKRLSLKEAHTNSNS 324


>ref|XP_002304616.1| predicted protein [Populus trichocarpa] gi|222842048|gb|EEE79595.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  473 bits (1217), Expect = e-131
 Identities = 244/350 (69%), Positives = 278/350 (79%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1123 MILLQSPSRFLLQILQNRVRNLDKGIDLDCHSVEFDDVRYHIQVSMKAPQSMVLSMALPA 944
            MILLQS SRFLLQ L NRV+NL+K ++LD H VEFDDVRYHI VSMK P  ++LS++LP 
Sbjct: 1    MILLQSHSRFLLQTLLNRVQNLEKAVELDYHWVEFDDVRYHILVSMKNPNVLLLSVSLPI 60

Query: 943  PPPEAIFYGGLPFGAIEAIKGAFGMIVQILDPPKDGYNLTMKINLGKLPPDEXXXXXXXX 764
            PPPEA+F GGLPFGAIEA+K A+G++VQILDPP+DG+NLT+K+NLGKLP DE        
Sbjct: 61   PPPEAVFIGGLPFGAIEALKAAYGVVVQILDPPRDGFNLTLKLNLGKLPLDE-------- 112

Query: 763  XXXXXXXXXXXXXXXXXXEKKQALLVKIASVREVVLGAPLKVVLKHLSSRTVASDADGPI 584
                              E + ALLVKIASVREVVLGAPL+VVLKHLSSRTV    DG +
Sbjct: 113  ------------------EHRYALLVKIASVREVVLGAPLRVVLKHLSSRTVIPGIDGLL 154

Query: 583  ALVHRPKESFFLVPQAEKVTVVFPMRFQDSVDIVLATSFLQEFVDARRSPGLNNAPPCMW 404
            ALVHR KESFFLVPQ +KVTVVFPMRF+DS+DI  ATSFLQEFV+AR + GLNNAPPC+W
Sbjct: 155  ALVHRSKESFFLVPQPDKVTVVFPMRFKDSIDIAFATSFLQEFVEARHTAGLNNAPPCLW 214

Query: 403  SLSPPPELKGVPPHALTANAGFVKFVIFPRHVEGRKLDKTVWSLSTFHAYVSYHVKCSEA 224
            S +PP ELK  P  AL+ANAGFV FVIFPRHVEG+KLD+TVW+LSTFHAYVSYHVKCSE 
Sbjct: 215  SPNPPLELKEAPAEALSANAGFVSFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEG 274

Query: 223  FMHTRMRRRVESLIQALDRAKPG-NEKSKLLQGKSFKRLSLKDRHNNSNS 77
            FMHTRMRRRVES+IQALDRAKPG  EK K    +SFKRLSLK+   NS S
Sbjct: 275  FMHTRMRRRVESMIQALDRAKPGVEEKKKSPNSRSFKRLSLKEARANSIS 324


>gb|EEC71199.1| hypothetical protein OsI_03108 [Oryza sativa Indica Group]
            gi|222618970|gb|EEE55102.1| hypothetical protein
            OsJ_02859 [Oryza sativa Japonica Group]
          Length = 320

 Score =  473 bits (1216), Expect = e-131
 Identities = 243/346 (70%), Positives = 278/346 (80%), Gaps = 1/346 (0%)
 Frame = -2

Query: 1123 MILLQSPSRFLLQILQNRVRNLDKGIDLDCHSVEFDDVRYHIQVSMKAPQSMVLSMALPA 944
            MILLQSPSRFLLQILQ+RV + DKG+D+DCH+VEFDDVRYHIQ SM+ P+ MVLS+ALP 
Sbjct: 1    MILLQSPSRFLLQILQDRVLSGDKGVDIDCHTVEFDDVRYHIQFSMRNPKVMVLSVALPL 60

Query: 943  PPPEAIFYGGLPFGAIEAIKGAFGMIVQILDPPKDGYNLTMKINLGKLPPDEXXXXXXXX 764
            PPPEA+ Y GLP GAIEAIK A+G +VQILDPPKDG++LTMKINL KLPPDE        
Sbjct: 61   PPPEAMLYDGLPLGAIEAIKAAYGPVVQILDPPKDGFDLTMKINLTKLPPDE-------- 112

Query: 763  XXXXXXXXXXXXXXXXXXEKKQALLVKIASVREVVLGAPLKVVLKHLSSRTVASDADGPI 584
                              E++ A+L +IASVREVVLGAPLK++LKHL+S+TVA + D  +
Sbjct: 113  ------------------EQRNAVLTQIASVREVVLGAPLKLLLKHLASKTVAPNVDKLV 154

Query: 583  ALVHRPKESFFLVPQAEKVTVVFPMRFQDSVDIVLATSFLQEFVDARRSPGLNNAPPCMW 404
            ALVHRP ESFF+ PQA+KVTVV+PMRFQDS+DIVLATSFLQEFV+ARR+  LNNAP C+W
Sbjct: 155  ALVHRPNESFFVAPQADKVTVVYPMRFQDSIDIVLATSFLQEFVEARRTSALNNAPSCLW 214

Query: 403  SLSPPPELKGVPPHALTANAGFVKFVIFPRHVEGRKLDKTVWSLSTFHAYVSYHVKCSEA 224
            S  PP ELKGVP  AL ANAGFV FV+FPRHVEG+KLDKTVWSL TFHAYVSYHVKCSE 
Sbjct: 215  SPVPPLELKGVPSDALNANAGFVTFVVFPRHVEGKKLDKTVWSLLTFHAYVSYHVKCSEG 274

Query: 223  FMHTRMRRRVESLIQALDRAKPGNEK-SKLLQGKSFKRLSLKDRHN 89
            FMHTRMRRRVE+LIQALDRAK   EK  KL+ G SFKRLSL +  N
Sbjct: 275  FMHTRMRRRVETLIQALDRAKSDAEKLKKLVNGGSFKRLSLNNDGN 320


>gb|ADM64536.1| Arp2/3 complex p35 subunit [Nicotiana tabacum]
          Length = 328

 Score =  472 bits (1214), Expect = e-131
 Identities = 237/350 (67%), Positives = 277/350 (79%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1123 MILLQSPSRFLLQILQNRVRNLDKGIDLDCHSVEFDDVRYHIQVSMKAPQSMVLSMALPA 944
            MILLQSPSR+LLQIL NRV+NL+KG++LDC  VEFDD+RYHIQ S+K P  ++LS++LP 
Sbjct: 1    MILLQSPSRYLLQILSNRVQNLEKGVELDCQWVEFDDIRYHIQASVKNPNVLLLSVSLPI 60

Query: 943  PPPEAIFYGGLPFGAIEAIKGAFGMIVQILDPPKDGYNLTMKINLGKLPPDEXXXXXXXX 764
            PPPE + +GGLP GA+EAIK A+G++ QILDPP+DG+NLT+K+NL KLPPDE        
Sbjct: 61   PPPETVLFGGLPLGALEAIKAAYGVVAQILDPPRDGFNLTLKLNLSKLPPDE-------- 112

Query: 763  XXXXXXXXXXXXXXXXXXEKKQALLVKIASVREVVLGAPLKVVLKHLSSRTVASDADGPI 584
                              E K ALL KIASVREVV+GAPL+ VLKHL SRTV SD   P+
Sbjct: 113  ------------------EHKHALLTKIASVREVVMGAPLRAVLKHLVSRTVPSDLGKPV 154

Query: 583  ALVHRPKESFFLVPQAEKVTVVFPMRFQDSVDIVLATSFLQEFVDARRSPGLNNAPPCMW 404
            ALVHRP ESFFLVPQ +KVTV+FPMRF DSVD VLATSFLQEFV+ARR+ GLNNAPPC+W
Sbjct: 155  ALVHRPNESFFLVPQVDKVTVIFPMRFNDSVDTVLATSFLQEFVEARRTAGLNNAPPCLW 214

Query: 403  SLSPPPELKGVPPHALTANAGFVKFVIFPRHVEGRKLDKTVWSLSTFHAYVSYHVKCSEA 224
            S S P ELK     AL+ANAGFV FVIFPRHVEGRKLD+TVW+LSTFHAYV+YHVKCSE 
Sbjct: 215  SPSAPQELKEAFTEALSANAGFVSFVIFPRHVEGRKLDRTVWNLSTFHAYVNYHVKCSEC 274

Query: 223  FMHTRMRRRVESLIQALDRAKPGNEKSKLLQ-GKSFKRLSLKDRHNNSNS 77
            FMHTRMRR+VESLIQALDRAKP +EK+K     +SFKR+SLKD +N+  S
Sbjct: 275  FMHTRMRRQVESLIQALDRAKPDSEKAKRSSPSRSFKRMSLKDGNNSLGS 324


>ref|XP_002461563.1| hypothetical protein SORBIDRAFT_02g004770 [Sorghum bicolor]
            gi|241924940|gb|EER98084.1| hypothetical protein
            SORBIDRAFT_02g004770 [Sorghum bicolor]
          Length = 323

 Score =  469 bits (1206), Expect = e-130
 Identities = 238/343 (69%), Positives = 278/343 (81%), Gaps = 1/343 (0%)
 Frame = -2

Query: 1123 MILLQSPSRFLLQILQNRVRNLDKGIDLDCHSVEFDDVRYHIQVSMKAPQSMVLSMALPA 944
            MILLQSPSRFLLQILQ+RV + +KG+D+DCH+VEFDDVRYHIQ SM+ P++MVLS+ALP 
Sbjct: 1    MILLQSPSRFLLQILQDRVLSGEKGMDIDCHTVEFDDVRYHIQFSMRNPKAMVLSVALPL 60

Query: 943  PPPEAIFYGGLPFGAIEAIKGAFGMIVQILDPPKDGYNLTMKINLGKLPPDEXXXXXXXX 764
            PPPEAI Y GLP GAIEAIK A+G +VQILDPPKDG++LTMKINL KLPPDE        
Sbjct: 61   PPPEAILYDGLPLGAIEAIKAAYGPVVQILDPPKDGFDLTMKINLTKLPPDE-------- 112

Query: 763  XXXXXXXXXXXXXXXXXXEKKQALLVKIASVREVVLGAPLKVVLKHLSSRTVASDADGPI 584
                              E++ A+L +IAS+REVVLGAPLK++LKHL+SRTVA + D  +
Sbjct: 113  ------------------EQRNAILTQIASIREVVLGAPLKLLLKHLASRTVAPNVDKLV 154

Query: 583  ALVHRPKESFFLVPQAEKVTVVFPMRFQDSVDIVLATSFLQEFVDARRSPGLNNAPPCMW 404
            ALVHRP ESFFL PQA+KVT+++PMRFQDS+DIVLATSFLQEFV+ARR+  LNN P CMW
Sbjct: 155  ALVHRPNESFFLAPQADKVTIMYPMRFQDSIDIVLATSFLQEFVEARRTAALNNVPSCMW 214

Query: 403  SLSPPPELKGVPPHALTANAGFVKFVIFPRHVEGRKLDKTVWSLSTFHAYVSYHVKCSEA 224
            S +PP ELKGV   AL ANAGFV FV++PRHVEG+KLD+TVW+L TFHAYVSYHVKCSE 
Sbjct: 215  SPAPPHELKGVSADALNANAGFVTFVVYPRHVEGKKLDRTVWNLLTFHAYVSYHVKCSEG 274

Query: 223  FMHTRMRRRVESLIQALDRAKPGNEK-SKLLQGKSFKRLSLKD 98
            FMHTRMRRRVESLIQALDRAK   EK  KL+ G SF+RLSLK+
Sbjct: 275  FMHTRMRRRVESLIQALDRAKSDAEKLKKLVHGGSFQRLSLKN 317


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