BLASTX nr result

ID: Dioscorea21_contig00005906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005906
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG45974.1| histone H4 [Zea mays]                                  156   2e-36
pdb|1AOI|B Chain B, Complex Between Nucleosome Core Particle (H3...   154   5e-36
gb|EHH18017.1| Histone H4 [Macaca mulatta]                            154   5e-36
ref|XP_002045100.1| GM19733 [Drosophila sechellia] gi|194130805|...   154   5e-36
sp|Q9U7D0.3|H4_MASBA RecName: Full=Histone H4 gi|6006733|gb|AAF0...   154   5e-36

>gb|ACG45974.1| histone H4 [Zea mays]
          Length = 103

 Score =  156 bits (394), Expect = 2e-36
 Identities = 86/114 (75%), Positives = 86/114 (75%)
 Frame = -3

Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184
           RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIR         
Sbjct: 18  RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIR--------- 68

Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22
                              DAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 69  -------------------DAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103


>pdb|1AOI|B Chain B, Complex Between Nucleosome Core Particle (H3,H4,H2a,H2b)
           And 146 Bp Long Dna Fragment gi|3745763|pdb|1AOI|F Chain
           F, Complex Between Nucleosome Core Particle
           (H3,H4,H2a,H2b) And 146 Bp Long Dna Fragment
          Length = 87

 Score =  154 bits (390), Expect = 5e-36
 Identities = 84/114 (73%), Positives = 86/114 (75%)
 Frame = -3

Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184
           RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIR         
Sbjct: 2   RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR--------- 52

Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22
                              DAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 53  -------------------DAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 87


>gb|EHH18017.1| Histone H4 [Macaca mulatta]
          Length = 103

 Score =  154 bits (390), Expect = 5e-36
 Identities = 84/114 (73%), Positives = 86/114 (75%)
 Frame = -3

Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184
           RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIR         
Sbjct: 18  RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR--------- 68

Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22
                              DAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 69  -------------------DAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103


>ref|XP_002045100.1| GM19733 [Drosophila sechellia] gi|194130805|gb|EDW52848.1| GM19733
           [Drosophila sechellia]
          Length = 88

 Score =  154 bits (390), Expect = 5e-36
 Identities = 84/114 (73%), Positives = 86/114 (75%)
 Frame = -3

Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184
           RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIR         
Sbjct: 3   RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR--------- 53

Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22
                              DAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 54  -------------------DAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 88


>sp|Q9U7D0.3|H4_MASBA RecName: Full=Histone H4 gi|6006733|gb|AAF00589.1|AF140034_1
           histone H4 [Mastigamoeba balamuthi]
          Length = 108

 Score =  154 bits (390), Expect = 5e-36
 Identities = 84/114 (73%), Positives = 86/114 (75%)
 Frame = -3

Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184
           RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIR         
Sbjct: 23  RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR--------- 73

Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22
                              D+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 74  -------------------DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 108


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