BLASTX nr result
ID: Dioscorea21_contig00005906
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00005906 (365 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACG45974.1| histone H4 [Zea mays] 156 2e-36 pdb|1AOI|B Chain B, Complex Between Nucleosome Core Particle (H3... 154 5e-36 gb|EHH18017.1| Histone H4 [Macaca mulatta] 154 5e-36 ref|XP_002045100.1| GM19733 [Drosophila sechellia] gi|194130805|... 154 5e-36 sp|Q9U7D0.3|H4_MASBA RecName: Full=Histone H4 gi|6006733|gb|AAF0... 154 5e-36 >gb|ACG45974.1| histone H4 [Zea mays] Length = 103 Score = 156 bits (394), Expect = 2e-36 Identities = 86/114 (75%), Positives = 86/114 (75%) Frame = -3 Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIR Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIR--------- 68 Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22 DAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 69 -------------------DAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103 >pdb|1AOI|B Chain B, Complex Between Nucleosome Core Particle (H3,H4,H2a,H2b) And 146 Bp Long Dna Fragment gi|3745763|pdb|1AOI|F Chain F, Complex Between Nucleosome Core Particle (H3,H4,H2a,H2b) And 146 Bp Long Dna Fragment Length = 87 Score = 154 bits (390), Expect = 5e-36 Identities = 84/114 (73%), Positives = 86/114 (75%) Frame = -3 Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIR Sbjct: 2 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR--------- 52 Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22 DAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 53 -------------------DAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 87 >gb|EHH18017.1| Histone H4 [Macaca mulatta] Length = 103 Score = 154 bits (390), Expect = 5e-36 Identities = 84/114 (73%), Positives = 86/114 (75%) Frame = -3 Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIR Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR--------- 68 Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22 DAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 69 -------------------DAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103 >ref|XP_002045100.1| GM19733 [Drosophila sechellia] gi|194130805|gb|EDW52848.1| GM19733 [Drosophila sechellia] Length = 88 Score = 154 bits (390), Expect = 5e-36 Identities = 84/114 (73%), Positives = 86/114 (75%) Frame = -3 Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIR Sbjct: 3 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR--------- 53 Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22 DAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 54 -------------------DAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 88 >sp|Q9U7D0.3|H4_MASBA RecName: Full=Histone H4 gi|6006733|gb|AAF00589.1|AF140034_1 histone H4 [Mastigamoeba balamuthi] Length = 108 Score = 154 bits (390), Expect = 5e-36 Identities = 84/114 (73%), Positives = 86/114 (75%) Frame = -3 Query: 363 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRXXXXXXXXX 184 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIR Sbjct: 23 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIR--------- 73 Query: 183 XXXXXXXXXXXXXXXXXXXDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 22 D+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 74 -------------------DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 108