BLASTX nr result

ID: Dioscorea21_contig00005815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005815
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24673.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis ...   135   3e-30
ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002330653.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
gb|ABK93787.1| unknown [Populus trichocarpa]                          131   7e-29

>emb|CBI24673.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/74 (85%), Positives = 70/74 (94%)
 Frame = -1

Query: 223 LALCSDCNTFAEYVKNDHELVSDCRKCCTDDSDDSMSKVTFSGAILEICMRKLVFYPEIV 44
           LALCSDCNT AEYVK D ELVSDC KCCT+DSDDSMSK+T+SGAILE+CMRKLVFYPE+V
Sbjct: 30  LALCSDCNTLAEYVK-DQELVSDCLKCCTEDSDDSMSKITYSGAILEVCMRKLVFYPEVV 88

Query: 43  GFIEEDKDEFPSVK 2
           GFIEE+KD+FPSVK
Sbjct: 89  GFIEEEKDKFPSVK 102


>ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis vinifera]
          Length = 165

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/74 (85%), Positives = 70/74 (94%)
 Frame = -1

Query: 223 LALCSDCNTFAEYVKNDHELVSDCRKCCTDDSDDSMSKVTFSGAILEICMRKLVFYPEIV 44
           LALCSDCNT AEYVK D ELVSDC KCCT+DSDDSMSK+T+SGAILE+CMRKLVFYPE+V
Sbjct: 44  LALCSDCNTLAEYVK-DQELVSDCLKCCTEDSDDSMSKITYSGAILEVCMRKLVFYPEVV 102

Query: 43  GFIEEDKDEFPSVK 2
           GFIEE+KD+FPSVK
Sbjct: 103 GFIEEEKDKFPSVK 116


>ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|222862926|gb|EEF00433.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/74 (82%), Positives = 70/74 (94%)
 Frame = -1

Query: 223 LALCSDCNTFAEYVKNDHELVSDCRKCCTDDSDDSMSKVTFSGAILEICMRKLVFYPEIV 44
           LALCSDCNT AEYVKN  ELVSDC KCCT+DSDDS+SK+T+SGAI+E+CMRKLVFYPEIV
Sbjct: 30  LALCSDCNTLAEYVKNQ-ELVSDCLKCCTEDSDDSISKITYSGAIIEVCMRKLVFYPEIV 88

Query: 43  GFIEEDKDEFPSVK 2
           GFIEE+KD+FP+VK
Sbjct: 89  GFIEEEKDQFPTVK 102


>ref|XP_002330653.1| predicted protein [Populus trichocarpa] gi|222872257|gb|EEF09388.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/74 (81%), Positives = 70/74 (94%)
 Frame = -1

Query: 223 LALCSDCNTFAEYVKNDHELVSDCRKCCTDDSDDSMSKVTFSGAILEICMRKLVFYPEIV 44
           LALCSDC+TF+EYVKN  ELVSDC KCCT+DSDDS+SK+T+SGAILE+CMRKLVFYPEIV
Sbjct: 39  LALCSDCHTFSEYVKNQ-ELVSDCLKCCTEDSDDSISKITYSGAILEVCMRKLVFYPEIV 97

Query: 43  GFIEEDKDEFPSVK 2
           GFIEE+KD+FP+ K
Sbjct: 98  GFIEEEKDQFPTFK 111


>gb|ABK93787.1| unknown [Populus trichocarpa]
          Length = 167

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/74 (81%), Positives = 70/74 (94%)
 Frame = -1

Query: 223 LALCSDCNTFAEYVKNDHELVSDCRKCCTDDSDDSMSKVTFSGAILEICMRKLVFYPEIV 44
           LALCSDC+TF+EYVKN  ELVSDC KCCT+DSDDS+SK+T+SGAILE+CMRKLVFYPEIV
Sbjct: 47  LALCSDCHTFSEYVKNQ-ELVSDCLKCCTEDSDDSISKITYSGAILEVCMRKLVFYPEIV 105

Query: 43  GFIEEDKDEFPSVK 2
           GFIEE+KD+FP+ K
Sbjct: 106 GFIEEEKDQFPTFK 119


Top