BLASTX nr result

ID: Dioscorea21_contig00005691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005691
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544835.1| PREDICTED: transcription initiation factor I...   197   1e-48
ref|XP_003519205.1| PREDICTED: transcription initiation factor I...   196   2e-48
gb|AFK36634.1| unknown [Lotus japonicus]                              195   4e-48
emb|CBI19296.3| unnamed protein product [Vitis vinifera]              195   4e-48
ref|XP_003620976.1| Transcription initiation factor IIA subunit ...   195   4e-48

>ref|XP_003544835.1| PREDICTED: transcription initiation factor IIA subunit 2-like
           [Glycine max]
          Length = 106

 Score =  197 bits (500), Expect = 1e-48
 Identities = 98/106 (92%), Positives = 101/106 (95%)
 Frame = -1

Query: 528 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTEALETQVKSKVAIK 349
           MATFELYRRSTIGMCLTETLDEMV NGTLSPELAIQVLVQFDKSMTEALETQVKSKV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 348 GHLHTYRFCDNVWTFILQDATFKSDECQETVGRVKIVACDSKLLGQ 211
           GHLHTYRFCDNVWTFILQDA FKS++ QE VGRVKIVACDSKLL Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKSEDSQEIVGRVKIVACDSKLLTQ 106


>ref|XP_003519205.1| PREDICTED: transcription initiation factor IIA subunit 2-like
           [Glycine max]
          Length = 106

 Score =  196 bits (498), Expect = 2e-48
 Identities = 97/106 (91%), Positives = 101/106 (95%)
 Frame = -1

Query: 528 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTEALETQVKSKVAIK 349
           MATFELYRRSTIGMCLTETLDEMV NGTLSPELAIQVLVQFDKSMTEALETQVKSKV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 348 GHLHTYRFCDNVWTFILQDATFKSDECQETVGRVKIVACDSKLLGQ 211
           GHLHTYRFCDNVWTFILQDA FK+++ QE VGRVKIVACDSKLL Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106


>gb|AFK36634.1| unknown [Lotus japonicus]
          Length = 106

 Score =  195 bits (496), Expect = 4e-48
 Identities = 97/106 (91%), Positives = 101/106 (95%)
 Frame = -1

Query: 528 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTEALETQVKSKVAIK 349
           MATFELYRRSTIGMCLTETLDEMV NGTLSPELAIQVLVQFDKSMTEALETQVKSKV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 348 GHLHTYRFCDNVWTFILQDATFKSDECQETVGRVKIVACDSKLLGQ 211
           GHLHTYRFCDNVWTFILQDA FK+++ QE VGRVKIVACDSKLL Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLTQ 106


>emb|CBI19296.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  195 bits (496), Expect = 4e-48
 Identities = 97/106 (91%), Positives = 100/106 (94%)
 Frame = -1

Query: 528 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTEALETQVKSKVAIK 349
           MATFELYRRSTIGMCLTETLDEMV NGTLSPELAIQVLVQFDKSMTEALE+QVKSKV IK
Sbjct: 58  MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 117

Query: 348 GHLHTYRFCDNVWTFILQDATFKSDECQETVGRVKIVACDSKLLGQ 211
           GHLHTYRFCDNVWTFILQDA FK++E QE VGRVKIVACDSKLL Q
Sbjct: 118 GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 163


>ref|XP_003620976.1| Transcription initiation factor IIA subunit [Medicago truncatula]
           gi|217071430|gb|ACJ84075.1| unknown [Medicago
           truncatula] gi|355495991|gb|AES77194.1| Transcription
           initiation factor IIA subunit [Medicago truncatula]
           gi|388521381|gb|AFK48752.1| unknown [Medicago
           truncatula]
          Length = 106

 Score =  195 bits (496), Expect = 4e-48
 Identities = 96/106 (90%), Positives = 101/106 (95%)
 Frame = -1

Query: 528 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTEALETQVKSKVAIK 349
           MATFELYRRSTIGMCLTETLDEMV NGTLSPE+AIQVLVQFDKSMTEALETQVKSKV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPEIAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 348 GHLHTYRFCDNVWTFILQDATFKSDECQETVGRVKIVACDSKLLGQ 211
           GHLHTYRFCDNVWTFILQDA FK+++ QE VGRVKIVACDSKLL Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLSQ 106


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