BLASTX nr result

ID: Dioscorea21_contig00005393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005393
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268790.1| PREDICTED: KH domain-containing protein At2g...   407   e-111
ref|XP_002466215.1| hypothetical protein SORBIDRAFT_01g003680 [S...   401   e-109
ref|NP_001051685.1| Os03g0815700 [Oryza sativa Japonica Group] g...   400   e-109
ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_002323686.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108

>ref|XP_002268790.1| PREDICTED: KH domain-containing protein At2g38610 [Vitis vinifera]
            gi|296085835|emb|CBI31159.3| unnamed protein product
            [Vitis vinifera]
          Length = 281

 Score =  407 bits (1045), Expect = e-111
 Identities = 205/281 (72%), Positives = 233/281 (82%), Gaps = 7/281 (2%)
 Frame = -3

Query: 1093 MSGMYAHSFSPARAISPQIRSMSEIDSQYLAELLAEHQKLGPFMQVLPLCSRLLNQEIIR 914
            MSG+Y H+FSPARA+SPQIRS  ++DSQYL+ELLAEHQKLGPFMQVLP+CSRLLNQEIIR
Sbjct: 1    MSGLYNHNFSPARAVSPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIIR 60

Query: 913  VSGTVPSQVLEELERQQPRSLSPMAPS------PGNNARG-NGIPPGRLPFPQGMAMDWQ 755
            VSG + +Q   + +R Q RS SPMA S       G    G NG+P  RL  P GM MDWQ
Sbjct: 61   VSGMISNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGLGGWNGLPQERLSGPHGMTMDWQ 120

Query: 754  GTLGNSNSYLVKKIMRLDIPVDAYPNFNFVGRLLGPRGNSLKRVEMSTGCRVYIRGKGSI 575
            G   + +SY VK+I+RL+IPVD YPNFNFVGRLLGPRGNSLKRVE +TGCRVYIRGKGSI
Sbjct: 121  GAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSI 180

Query: 574  KDPGKEEKLRGKMGYEHLSDPLHILIEAELPANVIDARLRQAQDIIEELLKPVDESQDVY 395
            KDP KE+KLRG+ GYEHL+DPLHILIEA+LPAN++D RLRQAQ+IIEELLKPVDESQD  
Sbjct: 181  KDPEKEDKLRGRPGYEHLNDPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDFI 240

Query: 394  KRQQLRELAMLNSGLREESPHPSGSVSPFNSGGMKRVKTGQ 272
            KRQQLRELA+LNS  REESP PSGSVSPFN+ GMKR KTG+
Sbjct: 241  KRQQLRELALLNSNFREESPGPSGSVSPFNTSGMKRAKTGR 281


>ref|XP_002466215.1| hypothetical protein SORBIDRAFT_01g003680 [Sorghum bicolor]
            gi|241920069|gb|EER93213.1| hypothetical protein
            SORBIDRAFT_01g003680 [Sorghum bicolor]
          Length = 279

 Score =  401 bits (1030), Expect = e-109
 Identities = 203/280 (72%), Positives = 236/280 (84%), Gaps = 6/280 (2%)
 Frame = -3

Query: 1093 MSGMYAHSFSPARAISPQIRSMSEIDSQYLAELLAEHQKLGPFMQVLPLCSRLLNQEIIR 914
            MSG+Y   FSPAR +SPQIRS  ++DSQYLAELLAEHQKLGPFMQVLP+C++LL+QEI+R
Sbjct: 1    MSGLYGQGFSPARNLSPQIRSNPDVDSQYLAELLAEHQKLGPFMQVLPICNKLLSQEIMR 60

Query: 913  VSGTVPSQVLEELERQQPRSLSPMA-PSPGNNARGNGIPPG-----RLPFPQGMAMDWQG 752
            VS  V +    + +R + RS SPM+ P+P  N  GNG  P      RL FPQG +MDWQG
Sbjct: 61   VSSIVHNHGFGDFDRHRFRSPSPMSSPNPRANLPGNGFSPWSGLQERLGFPQGTSMDWQG 120

Query: 751  TLGNSNSYLVKKIMRLDIPVDAYPNFNFVGRLLGPRGNSLKRVEMSTGCRVYIRGKGSIK 572
               + +S++VKKI+RL++PVD+YPNFNFVGR+LGPRGNSLKRVE STGCRV+IRGKGSIK
Sbjct: 121  APPSPSSHVVKKILRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIK 180

Query: 571  DPGKEEKLRGKMGYEHLSDPLHILIEAELPANVIDARLRQAQDIIEELLKPVDESQDVYK 392
            DPGKE+KLRGK GYEHLSDPLHILIEAE PA++IDARLR AQ+IIEELLKPVDESQD YK
Sbjct: 181  DPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEIIEELLKPVDESQDFYK 240

Query: 391  RQQLRELAMLNSGLREESPHPSGSVSPFNSGGMKRVKTGQ 272
            RQQLRELAMLNS LRE+SPHP GSVSPF++GGMKR KTGQ
Sbjct: 241  RQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 279


>ref|NP_001051685.1| Os03g0815700 [Oryza sativa Japonica Group]
            gi|75226290|sp|Q75GR5.1|SPIN1_ORYSJ RecName: Full=KH
            domain-containing protein SPIN1; AltName:
            Full=SPL11-interacting protein 1
            gi|37718879|gb|AAR01750.1| expressed protein [Oryza
            sativa Japonica Group] gi|108711745|gb|ABF99540.1| KH
            domain-containing protein, putative, expressed [Oryza
            sativa Japonica Group] gi|113550156|dbj|BAF13599.1|
            Os03g0815700 [Oryza sativa Japonica Group]
            gi|215694514|dbj|BAG89507.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218193980|gb|EEC76407.1|
            hypothetical protein OsI_14057 [Oryza sativa Indica
            Group] gi|222626037|gb|EEE60169.1| hypothetical protein
            OsJ_13097 [Oryza sativa Japonica Group]
          Length = 281

 Score =  400 bits (1028), Expect = e-109
 Identities = 204/282 (72%), Positives = 239/282 (84%), Gaps = 8/282 (2%)
 Frame = -3

Query: 1093 MSGMYAHSFSPARAISPQIRSM-SEIDSQYLAELLAEHQKLGPFMQVLPLCSRLLNQEII 917
            MSG+Y+  FSPAR +SPQIRS  +++DSQYLAELLAEHQKLGPFMQVLP+CS+LL+QEI+
Sbjct: 1    MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 916  RVSGTVPSQVLEELERQQPRSLSPMA-PSPGNNARGNGIPPG------RLPFPQGMAMDW 758
            RVS  V +    + +R + RS SPM+ P+P +N  GNG  P       RL FPQG +MDW
Sbjct: 61   RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDW 120

Query: 757  QGTLGNSNSYLVKKIMRLDIPVDAYPNFNFVGRLLGPRGNSLKRVEMSTGCRVYIRGKGS 578
            QG   + +S++VKKI+RLD+PVD+YPNFNFVGR+LGPRGNSLKRVE STGCRV+IRGKGS
Sbjct: 121  QGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGS 180

Query: 577  IKDPGKEEKLRGKMGYEHLSDPLHILIEAELPANVIDARLRQAQDIIEELLKPVDESQDV 398
            IKDPGKE+KLRGK GYEHLSDPLHILIEAE PA++IDARLR AQ++IEELLKPVDESQD 
Sbjct: 181  IKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDF 240

Query: 397  YKRQQLRELAMLNSGLREESPHPSGSVSPFNSGGMKRVKTGQ 272
            YKRQQLRELAMLNS LRE+SPHP GSVSPF++GGMKR KTGQ
Sbjct: 241  YKRQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281


>ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|222833468|gb|EEE71945.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  399 bits (1026), Expect = e-109
 Identities = 205/281 (72%), Positives = 229/281 (81%), Gaps = 7/281 (2%)
 Frame = -3

Query: 1093 MSGMYAHSFSPARAISPQIRSMSEIDSQYLAELLAEHQKLGPFMQVLPLCSRLLNQEIIR 914
            MSG+Y  +FSPARA SPQIRS  ++DSQYL+ELLAEHQKLGPFMQVLP CSRLLNQEI R
Sbjct: 1    MSGLYNPNFSPARAASPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPTCSRLLNQEIFR 60

Query: 913  VSGTVPSQVLEELERQQPRSLSPMAPSP------GNNARG-NGIPPGRLPFPQGMAMDWQ 755
            VSG + +Q   + +R + RS SPMA S       G    G NGIP  RL  P GM MDWQ
Sbjct: 61   VSGMMSNQGFGDFDRLRHRSPSPMASSNLLSNVGGTGLSGWNGIPQERLSGPPGMTMDWQ 120

Query: 754  GTLGNSNSYLVKKIMRLDIPVDAYPNFNFVGRLLGPRGNSLKRVEMSTGCRVYIRGKGSI 575
            G   + +SY VK+I+RL+IPVD YPNFNFVGRLLGPRGNSLKRVE +TGCRVYIRGKGSI
Sbjct: 121  GAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSI 180

Query: 574  KDPGKEEKLRGKMGYEHLSDPLHILIEAELPANVIDARLRQAQDIIEELLKPVDESQDVY 395
            KDP KEEKLRG+ GYEHL+DPLHILIEA+LPAN++D RLRQAQ+IIEELLKPVDESQD  
Sbjct: 181  KDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDFI 240

Query: 394  KRQQLRELAMLNSGLREESPHPSGSVSPFNSGGMKRVKTGQ 272
            KRQQLRELAMLNS  REESP PSGSVSPFN+ GMKR KTG+
Sbjct: 241  KRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRAKTGR 281


>ref|XP_002323686.1| predicted protein [Populus trichocarpa] gi|222868316|gb|EEF05447.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  398 bits (1022), Expect = e-108
 Identities = 202/281 (71%), Positives = 230/281 (81%), Gaps = 7/281 (2%)
 Frame = -3

Query: 1093 MSGMYAHSFSPARAISPQIRSMSEIDSQYLAELLAEHQKLGPFMQVLPLCSRLLNQEIIR 914
            MSG+Y  SFSPARA SPQIRS  ++DSQYL+ELLAEHQKLGPFMQ+LP+CSRLLNQEI R
Sbjct: 1    MSGLYNPSFSPARAASPQIRSTPDVDSQYLSELLAEHQKLGPFMQILPICSRLLNQEIFR 60

Query: 913  VSGTVPSQVLEELERQQPRSLSPMAPSP-----GNNARG--NGIPPGRLPFPQGMAMDWQ 755
            VSG + +Q   + +R + RS SPMA S      G    G  NG+P  RL  P GM MDWQ
Sbjct: 61   VSGMMSNQGFGDFDRLRHRSPSPMASSNLISNVGGTGLGGWNGLPQERLSGPPGMTMDWQ 120

Query: 754  GTLGNSNSYLVKKIMRLDIPVDAYPNFNFVGRLLGPRGNSLKRVEMSTGCRVYIRGKGSI 575
            G   + +S+ VK+I+RL+IPVD YPNFNFVGRLLGPRGNSLKRVE +TGCRVYIRGKGSI
Sbjct: 121  GAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSI 180

Query: 574  KDPGKEEKLRGKMGYEHLSDPLHILIEAELPANVIDARLRQAQDIIEELLKPVDESQDVY 395
            KDP KEEKL+G+ GYEHL+DPLHILIEA+LPAN++D RLRQAQ+IIEELLKPVDESQD  
Sbjct: 181  KDPDKEEKLKGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDFI 240

Query: 394  KRQQLRELAMLNSGLREESPHPSGSVSPFNSGGMKRVKTGQ 272
            KRQQLRELAMLNS  REESP PSGSVSPFN+ GMKR KTG+
Sbjct: 241  KRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRAKTGR 281


Top