BLASTX nr result

ID: Dioscorea21_contig00005354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005354
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   177   6e-43
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              177   6e-43
emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]   177   6e-43
ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [S...   162   3e-38
gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]         160   1e-37

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/133 (62%), Positives = 106/133 (79%)
 Frame = -3

Query: 401 EDLNAFYVKSTGARVTPDSSVSLIYKYCERLPKDKYFTPKPIFNSTFEGGRYQCSLTLPP 222
           E++++++V STGA VT DSSVSLI++YCE+LP DKYFTPKP F+ T+  G Y+C LTLPP
Sbjct: 567 EEMDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPP 626

Query: 221 NAAFQTIVGPPSINSKLAKQLVSLDACVELHKLGVLNDHLLPHAEEPREIDAAEAYNNYA 42
           NAAFQTI+GP + NS L+KQLV L+AC +LH++G L+DHLLP+ EEP E D        A
Sbjct: 627 NAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSA 686

Query: 41  SGAGTSKRKELHG 3
           +GAGT+KRKELHG
Sbjct: 687 AGAGTTKRKELHG 699


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/133 (62%), Positives = 106/133 (79%)
 Frame = -3

Query: 401 EDLNAFYVKSTGARVTPDSSVSLIYKYCERLPKDKYFTPKPIFNSTFEGGRYQCSLTLPP 222
           E++++++V STGA VT DSSVSLI++YCE+LP DKYFTPKP F+ T+  G Y+C LTLPP
Sbjct: 575 EEMDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPP 634

Query: 221 NAAFQTIVGPPSINSKLAKQLVSLDACVELHKLGVLNDHLLPHAEEPREIDAAEAYNNYA 42
           NAAFQTI+GP + NS L+KQLV L+AC +LH++G L+DHLLP+ EEP E D        A
Sbjct: 635 NAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSA 694

Query: 41  SGAGTSKRKELHG 3
           +GAGT+KRKELHG
Sbjct: 695 AGAGTTKRKELHG 707


>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/133 (62%), Positives = 106/133 (79%)
 Frame = -3

Query: 401  EDLNAFYVKSTGARVTPDSSVSLIYKYCERLPKDKYFTPKPIFNSTFEGGRYQCSLTLPP 222
            E++++++V STGA VT DSSVSLI++YCE+LP DKYFTPKP F+ T+  G Y+C LTLPP
Sbjct: 1576 EEMDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPP 1635

Query: 221  NAAFQTIVGPPSINSKLAKQLVSLDACVELHKLGVLNDHLLPHAEEPREIDAAEAYNNYA 42
            NAAFQTI+GP + NS L+KQLV L+AC +LH++G L+DHLLP+ EEP E D        A
Sbjct: 1636 NAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSA 1695

Query: 41   SGAGTSKRKELHG 3
            +GAGT+KRKELHG
Sbjct: 1696 AGAGTTKRKELHG 1708


>ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
           gi|241920910|gb|EER94054.1| hypothetical protein
           SORBIDRAFT_01g018890 [Sorghum bicolor]
          Length = 1586

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/128 (58%), Positives = 96/128 (75%)
 Frame = -3

Query: 386 FYVKSTGARVTPDSSVSLIYKYCERLPKDKYFTPKPIFNSTFEGGRYQCSLTLPPNAAFQ 207
           ++V+STGA +T +  V+LIYKYCE+LPKD+Y+ PKP F    + G YQC+LT+PPNAAF+
Sbjct: 503 YHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQCALTMPPNAAFR 562

Query: 206 TIVGPPSINSKLAKQLVSLDACVELHKLGVLNDHLLPHAEEPREIDAAEAYNNYASGAGT 27
           +IVGPPS    LAKQLV L+AC +LH+LG L+DHL+P  EEP +ID         SG GT
Sbjct: 563 SIVGPPSSTCNLAKQLVCLEACKKLHELGELDDHLVPLTEEPMDIDTDTTDKKCVSGPGT 622

Query: 26  SKRKELHG 3
           +KRKELHG
Sbjct: 623 TKRKELHG 630


>gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]
          Length = 1116

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/133 (58%), Positives = 98/133 (73%)
 Frame = -3

Query: 401 EDLNAFYVKSTGARVTPDSSVSLIYKYCERLPKDKYFTPKPIFNSTFEGGRYQCSLTLPP 222
           + +  + V+STGA +T D  V+LI KYCE+LPKD+YF PKP F  T E G ++C+LTLP 
Sbjct: 42  QGMYTYQVQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPR 101

Query: 221 NAAFQTIVGPPSINSKLAKQLVSLDACVELHKLGVLNDHLLPHAEEPREIDAAEAYNNYA 42
           NAAFQ+IVGP S +S L+KQLVSL+AC +LH+LG LNDHL+P  EEP + D   A     
Sbjct: 102 NAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTDFTTADEKCI 161

Query: 41  SGAGTSKRKELHG 3
           SG GT+KRKELHG
Sbjct: 162 SGPGTTKRKELHG 174


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