BLASTX nr result

ID: Dioscorea21_contig00005115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005115
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46523.1|CLPA_BRANA RecName: Full=ATP-dependent Clp protease ...    99   6e-19
ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata ...    96   6e-18
gb|AAC04687.1| ClpC [Arabidopsis thaliana]                             96   6e-18
ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ...    96   6e-18
tpg|DAA38057.1| TPA: hypothetical protein ZEAMMB73_563254, parti...    95   1e-17

>sp|P46523.1|CLPA_BRANA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
           homolog, chloroplastic; Flags: Precursor
           gi|406311|emb|CAA53077.1| clpA [Brassica napus]
          Length = 874

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 54/77 (70%), Positives = 58/77 (75%)
 Frame = -1

Query: 233 VKTSISVPKGKASRGVAVAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 54
           V+ +++VPKGK SRGV  AMFERFTEKAIKVIMLAQEEARRLGHNFV             
Sbjct: 22  VRQAMNVPKGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 81

Query: 53  XXIAAKVLKSMGINLKD 3
             IAAKVLKSMGINLKD
Sbjct: 82  TGIAAKVLKSMGINLKD 98


>ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
           gi|297311666|gb|EFH42090.1| heat shock protein 93-V
           [Arabidopsis lyrata subsp. lyrata]
          Length = 929

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 53/77 (68%), Positives = 57/77 (74%)
 Frame = -1

Query: 233 VKTSISVPKGKASRGVAVAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 54
           V+ +++VPKGKASR    AMFERFTEKAIKVIMLAQEEARRLGHNFV             
Sbjct: 75  VRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 134

Query: 53  XXIAAKVLKSMGINLKD 3
             IAAKVLKSMGINLKD
Sbjct: 135 TGIAAKVLKSMGINLKD 151


>gb|AAC04687.1| ClpC [Arabidopsis thaliana]
          Length = 928

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 53/77 (68%), Positives = 57/77 (74%)
 Frame = -1

Query: 233 VKTSISVPKGKASRGVAVAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 54
           V+ +++VPKGKASR    AMFERFTEKAIKVIMLAQEEARRLGHNFV             
Sbjct: 74  VRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 133

Query: 53  XXIAAKVLKSMGINLKD 3
             IAAKVLKSMGINLKD
Sbjct: 134 TGIAAKVLKSMGINLKD 150


>ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
           thaliana] gi|75170759|sp|Q9FI56.1|CLPC1_ARATH RecName:
           Full=Chaperone protein ClpC1, chloroplastic; AltName:
           Full=ATP-dependent Clp protease ATP-binding subunit ClpC
           homolog 1; AltName: Full=Casein lytic proteinase C1;
           AltName: Full=Protein DE-REGULATED CAO ACCUMULATION 1;
           AltName: Full=Protein IRON-RESCUED MUTANT 1; Flags:
           Precursor gi|9758239|dbj|BAB08738.1| ATP-dependent Clp
           protease, ATP-binding subunit [Arabidopsis thaliana]
           gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis
           thaliana] gi|110742601|dbj|BAE99213.1| ATP-dependent Clp
           protease [Arabidopsis thaliana]
           gi|332008628|gb|AED96011.1| ATP-dependent Clp protease
           ATP-binding subunit ClpC [Arabidopsis thaliana]
          Length = 929

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 53/77 (68%), Positives = 57/77 (74%)
 Frame = -1

Query: 233 VKTSISVPKGKASRGVAVAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 54
           V+ +++VPKGKASR    AMFERFTEKAIKVIMLAQEEARRLGHNFV             
Sbjct: 75  VRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 134

Query: 53  XXIAAKVLKSMGINLKD 3
             IAAKVLKSMGINLKD
Sbjct: 135 TGIAAKVLKSMGINLKD 151


>tpg|DAA38057.1| TPA: hypothetical protein ZEAMMB73_563254, partial [Zea mays]
          Length = 188

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/77 (68%), Positives = 56/77 (72%)
 Frame = -1

Query: 233 VKTSISVPKGKASRGVAVAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXX 54
           V + I+ P+G ASRGV  AMFERFTEKAIKVIMLAQEEARRLGHNFV             
Sbjct: 71  VASQIARPRGSASRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 130

Query: 53  XXIAAKVLKSMGINLKD 3
             IAAKVLKSMGINLKD
Sbjct: 131 TGIAAKVLKSMGINLKD 147


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