BLASTX nr result
ID: Dioscorea21_contig00005008
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00005008
(839 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare] 233 4e-59
dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare] 232 9e-59
ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group] g... 231 1e-58
gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativ... 231 1e-58
ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays] gi|... 231 2e-58
>emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 233 bits (594), Expect = 4e-59
Identities = 117/154 (75%), Positives = 136/154 (88%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 QLAQLFEQAGVVEVSEVIFNKKTDQSLGFGFVTMSTVQEAKKAVEMFHRYDYNGRLLTVN 180
+LAQLFEQAGVVEVSEVI+N++TDQS GFGFVTMST++EA+KAVEMFHRYD NGRLLTVN
Sbjct: 131 RLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVN 190
Query: 181 KAAPRGSRPVQI-RDYEPTFRLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRS 357
KAAPRG+R + RD +FR+YVGNLPWQVD RL E+F EHG V+DAKVV DR+TGRS
Sbjct: 191 KAAPRGARVERPPRDSGSSFRIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRS 250
Query: 358 RGFGFVTMGSKEELDGAIAALDGESLDGRTIRVS 459
RGFGFVTM S+EELD AIAALDG+SL+GR +RV+
Sbjct: 251 RGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 284
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = +1
Query: 238 RLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRSRGFGFVTMGSKEELDGAIAA 417
++YVGNLP+ VD +RL ++F + G V ++V+ +RET +SRGFGFVTM + EE + A+
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 176
Query: 418 LDGESLDGRTIRVS 459
++GR + V+
Sbjct: 177 FHRYDVNGRLLTVN 190
>dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 232 bits (591), Expect = 9e-59
Identities = 116/154 (75%), Positives = 136/154 (88%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 QLAQLFEQAGVVEVSEVIFNKKTDQSLGFGFVTMSTVQEAKKAVEMFHRYDYNGRLLTVN 180
+LAQLFEQAGVVEVSEVI+N++TDQS GFGFVTMST++EA+KAVEMFHRYD NGRLLTVN
Sbjct: 131 RLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVN 190
Query: 181 KAAPRGSRPVQI-RDYEPTFRLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRS 357
KAAPRG+R + RD +FR+YVGNLPWQVD RL E+F EHG V+DA+VV DR+TGRS
Sbjct: 191 KAAPRGARVERPPRDSGSSFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRS 250
Query: 358 RGFGFVTMGSKEELDGAIAALDGESLDGRTIRVS 459
RGFGFVTM S+EELD AIAALDG+SL+GR +RV+
Sbjct: 251 RGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 284
Score = 66.2 bits (160), Expect = 9e-09
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = +1
Query: 238 RLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRSRGFGFVTMGSKEELDGAIAA 417
++YVGNLP+ VD +RL ++F + G V ++V+ +RET +SRGFGFVTM + EE + A+
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 176
Query: 418 LDGESLDGRTIRVS 459
++GR + V+
Sbjct: 177 FHRYDVNGRLLTVN 190
>ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic
acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic
acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa
Japonica Group] gi|215697272|dbj|BAG91266.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein
OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein
OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 231 bits (590), Expect = 1e-58
Identities = 114/154 (74%), Positives = 137/154 (88%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 QLAQLFEQAGVVEVSEVIFNKKTDQSLGFGFVTMSTVQEAKKAVEMFHRYDYNGRLLTVN 180
+LAQLFEQAG+VEVSEVI+N++TD+S GFGFVTMSTV+EA+KAVEMFHRYD +GRLLTVN
Sbjct: 158 RLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVDGRLLTVN 217
Query: 181 KAAPRGSRPVQI-RDYEPTFRLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRS 357
KAAPRG+R + R + P+FR+YVGNLPWQVD RL ++F EHG V+DA+VV DRETGRS
Sbjct: 218 KAAPRGARVERPPRQFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRS 277
Query: 358 RGFGFVTMGSKEELDGAIAALDGESLDGRTIRVS 459
RGFGFVTM ++EELD AIAALDG+SLDGR +RV+
Sbjct: 278 RGFGFVTMATQEELDDAIAALDGQSLDGRALRVN 311
Score = 69.7 bits (169), Expect = 8e-10
Identities = 33/74 (44%), Positives = 51/74 (68%)
Frame = +1
Query: 238 RLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRSRGFGFVTMGSKEELDGAIAA 417
++YVGNLP+ +D +RL ++F + G V ++V+ +RET RSRGFGFVTM + EE + A+
Sbjct: 144 KVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 203
Query: 418 LDGESLDGRTIRVS 459
+DGR + V+
Sbjct: 204 FHRYDVDGRLLTVN 217
>gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 231 bits (590), Expect = 1e-58
Identities = 114/154 (74%), Positives = 137/154 (88%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 QLAQLFEQAGVVEVSEVIFNKKTDQSLGFGFVTMSTVQEAKKAVEMFHRYDYNGRLLTVN 180
+LAQLFEQAG+VEVSEVI+N++TD+S GFGFVTMSTV+EA+KAVEMFHRYD +GRLLTVN
Sbjct: 22 RLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVDGRLLTVN 81
Query: 181 KAAPRGSRPVQI-RDYEPTFRLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRS 357
KAAPRG+R + R + P+FR+YVGNLPWQVD RL ++F EHG V+DA+VV DRETGRS
Sbjct: 82 KAAPRGARVERPPRQFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRS 141
Query: 358 RGFGFVTMGSKEELDGAIAALDGESLDGRTIRVS 459
RGFGFVTM ++EELD AIAALDG+SLDGR +RV+
Sbjct: 142 RGFGFVTMATQEELDDAIAALDGQSLDGRALRVN 175
Score = 69.7 bits (169), Expect = 8e-10
Identities = 33/74 (44%), Positives = 51/74 (68%)
Frame = +1
Query: 238 RLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRSRGFGFVTMGSKEELDGAIAA 417
++YVGNLP+ +D +RL ++F + G V ++V+ +RET RSRGFGFVTM + EE + A+
Sbjct: 8 KVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 67
Query: 418 LDGESLDGRTIRVS 459
+DGR + V+
Sbjct: 68 FHRYDVDGRLLTVN 81
>ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays] gi|168526|gb|AAA33486.1|
nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding
protein1 [Zea mays]
Length = 303
Score = 231 bits (588), Expect = 2e-58
Identities = 116/154 (75%), Positives = 135/154 (87%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 QLAQLFEQAGVVEVSEVIFNKKTDQSLGFGFVTMSTVQEAKKAVEMFHRYDYNGRLLTVN 180
+LAQLF+QAGVVEV+EVI+N++TDQS GFGFVTMSTV+EA+KAVEMFHRYD NGRLLTVN
Sbjct: 140 RLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMFHRYDVNGRLLTVN 199
Query: 181 KAAPRGSRPVQI-RDYEPTFRLYVGNLPWQVDGQRLKEVFCEHGNVIDAKVVSDRETGRS 357
KAAPRGSR + R P+ R+YVGNLPWQVD RL E+F EHG V+DA+VV DRETGRS
Sbjct: 200 KAAPRGSRVDRPPRQSGPSLRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRETGRS 259
Query: 358 RGFGFVTMGSKEELDGAIAALDGESLDGRTIRVS 459
RGFGFVTM S++ELD AIAALDG+SLDGR +RV+
Sbjct: 260 RGFGFVTMASQDELDDAIAALDGQSLDGRALRVN 293
Score = 68.6 bits (166), Expect = 2e-09
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 9/124 (7%)
Frame = +1
Query: 115 EAKKAVEMFHRYDYNGRLLTVNKAAPRGSRPVQ------IRDY-EPT--FRLYVGNLPWQ 267
E K VE+F D G V+ + S V+ + +Y EP ++YVGNLP+
Sbjct: 76 EKDKEVELFGSGDDEGAGELVDDHSVEVSAAVEDEVEEEVGEYVEPPEEAKVYVGNLPYD 135
Query: 268 VDGQRLKEVFCEHGNVIDAKVVSDRETGRSRGFGFVTMGSKEELDGAIAALDGESLDGRT 447
VD +RL ++F + G V A+V+ +RET +SRGFGFVTM + EE + A+ ++GR
Sbjct: 136 VDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMFHRYDVNGRL 195
Query: 448 IRVS 459
+ V+
Sbjct: 196 LTVN 199