BLASTX nr result

ID: Dioscorea21_contig00004912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004912
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602521.1| Ribonuclease P protein subunit p25 [Medicago...   234   4e-59
ref|XP_002264932.1| PREDICTED: uncharacterized protein LOC100265...   231   2e-58
ref|XP_002300911.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
emb|CBI18930.3| unnamed protein product [Vitis vinifera]              230   4e-58
ref|NP_001239854.1| uncharacterized protein LOC100818986 [Glycin...   230   5e-58

>ref|XP_003602521.1| Ribonuclease P protein subunit p25 [Medicago truncatula]
            gi|355491569|gb|AES72772.1| Ribonuclease P protein
            subunit p25 [Medicago truncatula]
          Length = 351

 Score =  234 bits (596), Expect = 4e-59
 Identities = 118/152 (77%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
 Frame = -3

Query: 1029 PLSFKMDRYQRVEKPMPESAIDENEIRITAQGRIRNYITYAIALFQEKGSDEIVLKAMGR 850
            P +  MDRYQRVEKP  +S I+ENEIRIT QGR+RNYITYA  LFQEKGSDEIV+KAMGR
Sbjct: 102  PTTQTMDRYQRVEKPKADSPINENEIRITTQGRMRNYITYATTLFQEKGSDEIVVKAMGR 161

Query: 849  AINKVVVIAELIKRRIVGLYQNTTTGSIDITDSWEPLEEGLLPIETTRHVSVMTITLSKK 670
            AINK V+I ELIKRRIVGL+QNT  GS DITD+WEPLEEGLLP+ETTRHVS++TITLSKK
Sbjct: 162  AINKTVMITELIKRRIVGLHQNTQIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKK 221

Query: 669  ELDSSSPGYQPPIPADQVKPLEE-SDYGESLP 577
            ELD+SS GYQPP+PADQVKPL E  D GE  P
Sbjct: 222  ELDTSSTGYQPPLPADQVKPLNEYEDEGEGSP 253



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 38/87 (43%), Positives = 52/87 (59%)
 Frame = -3

Query: 906 IALFQEKGSDEIVLKAMGRAINKVVVIAELIKRRIVGLYQNTTTGSIDITDSWEPLEEGL 727
           ++ + EK +D+I+LKAMGRAINK V+  + I    + ++QNT  GS DITD+WEPLEE  
Sbjct: 11  VSSYNEKEADDIILKAMGRAINKTVISMQKIG---LFVHQNTHIGSTDITDTWEPLEE-- 65

Query: 726 LPIETTRHVSVMTITLSKKELDSSSPG 646
                            +KELD+SS G
Sbjct: 66  -----------------EKELDTSSTG 75


>ref|XP_002264932.1| PREDICTED: uncharacterized protein LOC100265751 [Vitis vinifera]
            gi|296081198|emb|CBI18224.3| unnamed protein product
            [Vitis vinifera]
          Length = 259

 Score =  231 bits (590), Expect = 2e-58
 Identities = 117/148 (79%), Positives = 128/148 (86%), Gaps = 1/148 (0%)
 Frame = -3

Query: 1014 MDRYQRVEKPMPESAIDENEIRITAQGRIRNYITYAIALFQEKGSDEIVLKAMGRAINKV 835
            MDRYQRVEKP PE+ I+ENEIRITAQGR+RNYITYA  L Q+KGSDEI LKAMGRAINK 
Sbjct: 1    MDRYQRVEKPRPETPINENEIRITAQGRMRNYITYATTLLQDKGSDEIALKAMGRAINKT 60

Query: 834  VVIAELIKRRIVGLYQNTTTGSIDITDSWEPLEEGLLPIETTRHVSVMTITLSKKELDSS 655
            V+IAELIKRRI GL+QNT+ GS DITD WEPLEEGLLP+ETTRHVSV+ ITLSKKELD S
Sbjct: 61   VMIAELIKRRIAGLHQNTSIGSTDITDMWEPLEEGLLPLETTRHVSVIAITLSKKELDIS 120

Query: 654  SPGYQPPIPADQVKPLEESDY-GESLPS 574
            S GYQPPIPADQV+P  E DY GE  P+
Sbjct: 121  STGYQPPIPADQVRPWTEYDYEGEGSPA 148


>ref|XP_002300911.1| predicted protein [Populus trichocarpa] gi|222842637|gb|EEE80184.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  231 bits (589), Expect = 2e-58
 Identities = 115/141 (81%), Positives = 126/141 (89%)
 Frame = -3

Query: 1014 MDRYQRVEKPMPESAIDENEIRITAQGRIRNYITYAIALFQEKGSDEIVLKAMGRAINKV 835
            MDRYQRVEKP  E+ I+ENEIRIT QGR+RNYITYA  LFQEKGSDEI LKAMGRAINK 
Sbjct: 1    MDRYQRVEKPRNETPINENEIRITTQGRMRNYITYATTLFQEKGSDEISLKAMGRAINKT 60

Query: 834  VVIAELIKRRIVGLYQNTTTGSIDITDSWEPLEEGLLPIETTRHVSVMTITLSKKELDSS 655
            V+IAELIKRRI GL+QNT+ GS DITD+WEPLEEGLLP+ETTRHVSV+T+TLSKKELD+S
Sbjct: 61   VMIAELIKRRIAGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSVITVTLSKKELDTS 120

Query: 654  SPGYQPPIPADQVKPLEESDY 592
            S GYQ PIPADQVKPL E DY
Sbjct: 121  STGYQSPIPADQVKPLAEYDY 141


>emb|CBI18930.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  230 bits (587), Expect = 4e-58
 Identities = 123/184 (66%), Positives = 142/184 (77%), Gaps = 3/184 (1%)
 Frame = -3

Query: 1023 SFKMDRYQRVEKPMPESAIDENEIRITAQGRIRNYITYAIALFQEKGSDEIVLKAMGRAI 844
            S KMDRYQRVEKP  E+ IDENEIRIT+QGR+R+YITYA++L QEKGS+EIV KAMGRAI
Sbjct: 255  SEKMDRYQRVEKPREETPIDENEIRITSQGRMRSYITYAMSLLQEKGSNEIVFKAMGRAI 314

Query: 843  NKVVVIAELIKRRIVGLYQNTTTGSIDITDSWEPLEEGLLPIETTRHVSVMTITLSKKEL 664
            NK V I ELIKRRIVGL+QNT+ GS DITD+WEPLEEGLLP+ETTRHVS++TITLSKKEL
Sbjct: 315  NKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKEL 374

Query: 663  DSSSPGYQPPIPADQVKPLEESDY-GESLPSGHXXXXXXXXXXXXXGASDE--VMDDDVD 493
            ++SS GYQPP+PA+QVK   E DY GE  PSG              G S    V  +  D
Sbjct: 375  NTSSIGYQPPLPAEQVKAWTEFDYEGEGSPSGRGRGRGGRGRGRTRGVSGNGFVSAEYED 434

Query: 492  GGWN 481
            GGW+
Sbjct: 435  GGWD 438


>ref|NP_001239854.1| uncharacterized protein LOC100818986 [Glycine max]
            gi|255639553|gb|ACU20071.1| unknown [Glycine max]
          Length = 249

 Score =  230 bits (586), Expect = 5e-58
 Identities = 119/179 (66%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
 Frame = -3

Query: 1014 MDRYQRVEKPMPESAIDENEIRITAQGRIRNYITYAIALFQEKGSDEIVLKAMGRAINKV 835
            MDRYQ+VEKP  E+ IDENEIRIT+QGR+RNYITYA++L QEKGS+EIV KAMGRAINK 
Sbjct: 1    MDRYQKVEKPRAETPIDENEIRITSQGRMRNYITYAMSLLQEKGSNEIVFKAMGRAINKT 60

Query: 834  VVIAELIKRRIVGLYQNTTTGSIDITDSWEPLEEGLLPIETTRHVSVMTITLSKKELDSS 655
            V I ELIKRRIVGL+QNT  GS DITD+WEPLEEGLLP+ETTRHVS++TITLSKKELD+S
Sbjct: 61   VTIVELIKRRIVGLHQNTAIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTS 120

Query: 654  SPGYQPPIPADQVKPLEESDY-GESLPSGHXXXXXXXXXXXXXGASDEVMDDDVDGGWN 481
            S GYQPP+PADQVK   + DY GE  P+G                +  +  D  DGGW+
Sbjct: 121  SVGYQPPLPADQVKAATDFDYEGEGSPNGR-VRGRGGRGRGRGRGNGFISADYEDGGWD 178


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