BLASTX nr result

ID: Dioscorea21_contig00004906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004906
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo...   343   2e-92
ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group] g...   343   2e-92
ref|XP_003561547.1| PREDICTED: FACT complex subunit SPT16-like [...   338   7e-91
ref|XP_003557719.1| PREDICTED: FACT complex subunit SPT16-like [...   338   7e-91
ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [S...   337   1e-90

>gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group]
          Length = 1056

 Score =  343 bits (880), Expect = 2e-92
 Identities = 163/216 (75%), Positives = 193/216 (89%)
 Frame = -1

Query: 649 PETIMVFMNRQIHFLCSQKKANLLETLKKSSKEAVGADVVIHVKAKNDDGAGLMEEILHA 470
           PETI+VFM++QIHFLCSQKKANL+ TLKK++ +AVGAD+V+HVKAKND G GLME+I+ A
Sbjct: 78  PETIIVFMHKQIHFLCSQKKANLIGTLKKAANDAVGADIVLHVKAKNDSGVGLMEDIVRA 137

Query: 469 IRTQSKPDSAVIGYISKEAPEGKLLEIWSEKLNGSGFQLCDVTNGFSELFAVKDESELTC 290
           +  QSK D  ++G+I+KEAPEGKLLE W++KL+ S  QL D+TNGFSELFA+KD SE+TC
Sbjct: 138 VCAQSKSDDPIVGHIAKEAPEGKLLEAWADKLSSSSVQLTDITNGFSELFAMKDTSEITC 197

Query: 289 VKKAAYLTSSVMKNFVVPKLEKIIDEENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDI 110
           VKKA+YLTSSVMKNFVVPKLEK+IDEE KV+HSSLMD+TEK ILDPLKVKVKLKAENVDI
Sbjct: 198 VKKASYLTSSVMKNFVVPKLEKVIDEERKVTHSSLMDETEKAILDPLKVKVKLKAENVDI 257

Query: 109 CYPPIFQSGGEFDLRPSASSTDDNLYYDKKSVILCA 2
           CYPP+FQSGG+FDL+P ASS DD LYYD  SVI+CA
Sbjct: 258 CYPPVFQSGGKFDLKPGASSNDDYLYYDSASVIICA 293


>ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group]
           gi|75295962|sp|Q7X923.2|SPT16_ORYSJ RecName: Full=FACT
           complex subunit SPT16; AltName: Full=Facilitates
           chromatin transcription complex subunit SPT16
           gi|38346977|emb|CAD40293.2| OSJNBb0062H02.2 [Oryza
           sativa Japonica Group] gi|113564034|dbj|BAF14377.1|
           Os04g0321600 [Oryza sativa Japonica Group]
           gi|215768327|dbj|BAH00556.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 1056

 Score =  343 bits (880), Expect = 2e-92
 Identities = 163/216 (75%), Positives = 193/216 (89%)
 Frame = -1

Query: 649 PETIMVFMNRQIHFLCSQKKANLLETLKKSSKEAVGADVVIHVKAKNDDGAGLMEEILHA 470
           PETI+VFM++QIHFLCSQKKANL+ TLKK++ +AVGAD+V+HVKAKND G GLME+I+ A
Sbjct: 78  PETIIVFMHKQIHFLCSQKKANLIGTLKKAANDAVGADIVLHVKAKNDSGVGLMEDIVRA 137

Query: 469 IRTQSKPDSAVIGYISKEAPEGKLLEIWSEKLNGSGFQLCDVTNGFSELFAVKDESELTC 290
           +  QSK D  ++G+I+KEAPEGKLLE W++KL+ S  QL D+TNGFSELFA+KD SE+TC
Sbjct: 138 VCAQSKSDDPIVGHIAKEAPEGKLLEAWADKLSSSSVQLTDITNGFSELFAMKDTSEITC 197

Query: 289 VKKAAYLTSSVMKNFVVPKLEKIIDEENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDI 110
           VKKA+YLTSSVMKNFVVPKLEK+IDEE KV+HSSLMD+TEK ILDPLKVKVKLKAENVDI
Sbjct: 198 VKKASYLTSSVMKNFVVPKLEKVIDEERKVTHSSLMDETEKAILDPLKVKVKLKAENVDI 257

Query: 109 CYPPIFQSGGEFDLRPSASSTDDNLYYDKKSVILCA 2
           CYPP+FQSGG+FDL+P ASS DD LYYD  SVI+CA
Sbjct: 258 CYPPVFQSGGKFDLKPGASSNDDYLYYDSASVIICA 293


>ref|XP_003561547.1| PREDICTED: FACT complex subunit SPT16-like [Brachypodium
           distachyon]
          Length = 1082

 Score =  338 bits (866), Expect = 7e-91
 Identities = 161/216 (74%), Positives = 187/216 (86%)
 Frame = -1

Query: 649 PETIMVFMNRQIHFLCSQKKANLLETLKKSSKEAVGADVVIHVKAKNDDGAGLMEEILHA 470
           PETI+VFM +QIHFLCSQKKANL+  LK ++ EAVGAD ++HVK KN DG  LM++ILHA
Sbjct: 75  PETIIVFMQKQIHFLCSQKKANLIGVLKNAANEAVGADTILHVKGKNGDGIDLMDDILHA 134

Query: 469 IRTQSKPDSAVIGYISKEAPEGKLLEIWSEKLNGSGFQLCDVTNGFSELFAVKDESELTC 290
           +  QSK D+ V+G+I+KEAPEGKLLE W+EKL+G   QL DVTNGFSELFAVKD +E+ C
Sbjct: 135 VCAQSKSDTPVVGHIAKEAPEGKLLETWAEKLSGESVQLADVTNGFSELFAVKDPTEVIC 194

Query: 289 VKKAAYLTSSVMKNFVVPKLEKIIDEENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDI 110
           VKKAAYLTSSVMKNFVVP +EK+IDEE KVSHSSLMDDTEK+ILDPLK KVKLKAEN+DI
Sbjct: 195 VKKAAYLTSSVMKNFVVPNMEKVIDEERKVSHSSLMDDTEKIILDPLKAKVKLKAENIDI 254

Query: 109 CYPPIFQSGGEFDLRPSASSTDDNLYYDKKSVILCA 2
           CYPP+FQSGG+FDL+P ASS DD LYYD  SVI+CA
Sbjct: 255 CYPPVFQSGGKFDLKPGASSNDDYLYYDSASVIICA 290


>ref|XP_003557719.1| PREDICTED: FACT complex subunit SPT16-like [Brachypodium
           distachyon]
          Length = 1059

 Score =  338 bits (866), Expect = 7e-91
 Identities = 161/216 (74%), Positives = 187/216 (86%)
 Frame = -1

Query: 649 PETIMVFMNRQIHFLCSQKKANLLETLKKSSKEAVGADVVIHVKAKNDDGAGLMEEILHA 470
           PETI+VFM +QIHFLCSQKKANL+  LK ++ EAVGAD ++HVK KN DG  LM++ILHA
Sbjct: 75  PETIIVFMQKQIHFLCSQKKANLIGVLKNAANEAVGADTILHVKGKNGDGIDLMDDILHA 134

Query: 469 IRTQSKPDSAVIGYISKEAPEGKLLEIWSEKLNGSGFQLCDVTNGFSELFAVKDESELTC 290
           +  QSK D+ V+G+I+KEAPEGKLLE W+EKL+G   QL DVTNGFSELFAVKD +E+ C
Sbjct: 135 VCAQSKSDTPVVGHIAKEAPEGKLLETWAEKLSGESVQLADVTNGFSELFAVKDATEVIC 194

Query: 289 VKKAAYLTSSVMKNFVVPKLEKIIDEENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDI 110
           VKKAAYLTSSVMKNFVVP +EK+IDEE KVSHSSLMDDTEK+ILDPLK KVKLKAEN+DI
Sbjct: 195 VKKAAYLTSSVMKNFVVPNMEKVIDEERKVSHSSLMDDTEKIILDPLKAKVKLKAENIDI 254

Query: 109 CYPPIFQSGGEFDLRPSASSTDDNLYYDKKSVILCA 2
           CYPP+FQSGG+FDL+P ASS DD LYYD  SVI+CA
Sbjct: 255 CYPPVFQSGGKFDLKPGASSNDDYLYYDSASVIICA 290


>ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor]
           gi|241920009|gb|EER93153.1| hypothetical protein
           SORBIDRAFT_01g002390 [Sorghum bicolor]
          Length = 1054

 Score =  337 bits (863), Expect = 1e-90
 Identities = 162/216 (75%), Positives = 189/216 (87%)
 Frame = -1

Query: 649 PETIMVFMNRQIHFLCSQKKANLLETLKKSSKEAVGADVVIHVKAKNDDGAGLMEEILHA 470
           PETI+VFM++QIH LCSQKKANL+ TLKK++ E+VG D+V+HVK KN DGA LM+ I+ A
Sbjct: 75  PETIIVFMHKQIHVLCSQKKANLIGTLKKAANESVGVDIVLHVKTKNGDGADLMDHIVQA 134

Query: 469 IRTQSKPDSAVIGYISKEAPEGKLLEIWSEKLNGSGFQLCDVTNGFSELFAVKDESELTC 290
            R QSK D  V+G+I+KE PEGKLLE W+EKL+GSG +L DVTNGFSELFAVKD +E+TC
Sbjct: 135 ARNQSKSDKPVVGHIAKEVPEGKLLETWTEKLSGSGVRLTDVTNGFSELFAVKDTTEVTC 194

Query: 289 VKKAAYLTSSVMKNFVVPKLEKIIDEENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDI 110
           VKKAAYLTSSV+KNFVVPKLEK+IDEE KVSHSSLMDDTEK ILDPLKVKVKLK +NVDI
Sbjct: 195 VKKAAYLTSSVLKNFVVPKLEKVIDEEKKVSHSSLMDDTEKAILDPLKVKVKLKPDNVDI 254

Query: 109 CYPPIFQSGGEFDLRPSASSTDDNLYYDKKSVILCA 2
           CYPP+FQSGG+FDL+P ASS D+ LYYD  SVI+CA
Sbjct: 255 CYPPVFQSGGKFDLKPGASSNDEYLYYDSASVIICA 290


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