BLASTX nr result

ID: Dioscorea21_contig00004896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004896
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ11351.1| hypothetical protein OsJ_01218 [Oryza sativa Japo...    70   2e-10
ref|NP_001042675.1| Os01g0266100 [Oryza sativa Japonica Group] g...    70   2e-10
ref|XP_003631232.1| PREDICTED: RING-H2 finger protein ATL47-like...    65   6e-09
ref|XP_002334595.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002314901.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09

>gb|EAZ11351.1| hypothetical protein OsJ_01218 [Oryza sativa Japonica Group]
          Length = 274

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/63 (49%), Positives = 41/63 (65%)
 Frame = +1

Query: 97  IKEGEEIRELVCRHLFHRACLDRWLELWHSRCPLCRSCLIPCETKKKKVSGLQSLEMEDL 276
           + +GEE+REL CRH+FHRACLD WL L  + CPLCR CL+P   +  +   L   + +D 
Sbjct: 180 VDDGEEVRELRCRHVFHRACLDAWLVLPRATCPLCRDCLLPPPCEPPRSFPLDYYDDDDD 239

Query: 277 VAF 285
           V F
Sbjct: 240 VHF 242


>ref|NP_001042675.1| Os01g0266100 [Oryza sativa Japonica Group]
           gi|6815070|dbj|BAA90357.1| unknown protein [Oryza sativa
           Japonica Group] gi|113532206|dbj|BAF04589.1|
           Os01g0266100 [Oryza sativa Japonica Group]
           gi|125525306|gb|EAY73420.1| hypothetical protein
           OsI_01302 [Oryza sativa Indica Group]
           gi|215693226|dbj|BAG88608.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 204

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/63 (49%), Positives = 41/63 (65%)
 Frame = +1

Query: 97  IKEGEEIRELVCRHLFHRACLDRWLELWHSRCPLCRSCLIPCETKKKKVSGLQSLEMEDL 276
           + +GEE+REL CRH+FHRACLD WL L  + CPLCR CL+P   +  +   L   + +D 
Sbjct: 110 VDDGEEVRELRCRHVFHRACLDAWLVLPRATCPLCRDCLLPPPCEPPRSFPLDYYDDDDD 169

Query: 277 VAF 285
           V F
Sbjct: 170 VHF 172


>ref|XP_003631232.1| PREDICTED: RING-H2 finger protein ATL47-like [Vitis vinifera]
           gi|297737916|emb|CBI27117.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = +1

Query: 97  IKEGEEIRELVCRHLFHRACLDRWLELWHSRCPLCRSCLIP 219
           I+EGEE+REL C H+FHR CLDRWL   +  CPLCRSC  P
Sbjct: 102 IEEGEEVRELRCGHMFHRDCLDRWLGHRNGTCPLCRSCTAP 142


>ref|XP_002334595.1| predicted protein [Populus trichocarpa] gi|222873667|gb|EEF10798.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +1

Query: 97  IKEGEEIRELVCRHLFHRACLDRWLELWHSRCPLCRSCLIPCET 228
           ++EGEEIREL C H+FHRACL RWL+   S CPLCR  L P  T
Sbjct: 60  VQEGEEIRELRCGHIFHRACLYRWLDFRQSTCPLCRGSLTPRRT 103


>ref|XP_002314901.1| predicted protein [Populus trichocarpa] gi|222863941|gb|EEF01072.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +1

Query: 97  IKEGEEIRELVCRHLFHRACLDRWLELWHSRCPLCRSCLIPCET 228
           ++EGEEIREL C H+FHRACL RWL+   S CPLCR  L P  T
Sbjct: 60  VQEGEEIRELRCGHIFHRACLYRWLDFRQSTCPLCRGSLAPRRT 103