BLASTX nr result

ID: Dioscorea21_contig00004877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004877
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881215.1| hypothetical protein ARALYDRAFT_902256 [Arab...   252   9e-65
ref|XP_002862886.1| hypothetical protein ARALYDRAFT_920160 [Arab...   252   9e-65
ref|NP_565735.1| putative CCR4-associated factor 1-7 [Arabidopsi...   252   1e-64
ref|XP_002527306.1| ccr4-associated factor, putative [Ricinus co...   248   2e-63
ref|XP_003604226.1| Ribonuclease CAF1 [Medicago truncatula] gi|3...   246   6e-63

>ref|XP_002881215.1| hypothetical protein ARALYDRAFT_902256 [Arabidopsis lyrata subsp.
            lyrata] gi|297327054|gb|EFH57474.1| hypothetical protein
            ARALYDRAFT_902256 [Arabidopsis lyrata subsp. lyrata]
          Length = 275

 Score =  252 bits (644), Expect = 9e-65
 Identities = 120/156 (76%), Positives = 136/156 (87%)
 Frame = -1

Query: 1005 LIQLGLTLSASDGSLPVSPSSGRLLVWQFNFREFDPEADIYAHDSIDLLTSSGIDFQKNC 826
            +IQLGLT S   G+LP   +  +  +WQFNFREFD E+DIYA DSI+LL  SGIDF KN 
Sbjct: 74   MIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFAKNN 133

Query: 825  EKGIDSMRFAELLMSSGIVLNDSIHWVTFHSGYDFGYLLKLLTCRNLPETQAGFFELINM 646
            + GIDS RFAELLMSSGIVLN+++HWVTFHSGYDFGYLLKLLTC+NLPETQ GFFE+I++
Sbjct: 134  QFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISV 193

Query: 645  YFPRVYDIKHLMRFCNSLHGGLNKLAELLEVERVGI 538
            YFPRVYDIKHLM+FCNSLHGGLNKLAELLEVERVGI
Sbjct: 194  YFPRVYDIKHLMKFCNSLHGGLNKLAELLEVERVGI 229


>ref|XP_002862886.1| hypothetical protein ARALYDRAFT_920160 [Arabidopsis lyrata subsp.
            lyrata] gi|297308650|gb|EFH39145.1| hypothetical protein
            ARALYDRAFT_920160 [Arabidopsis lyrata subsp. lyrata]
          Length = 252

 Score =  252 bits (644), Expect = 9e-65
 Identities = 120/156 (76%), Positives = 136/156 (87%)
 Frame = -1

Query: 1005 LIQLGLTLSASDGSLPVSPSSGRLLVWQFNFREFDPEADIYAHDSIDLLTSSGIDFQKNC 826
            +IQLGLT S   G+LP   +  +  +WQFNFREFD E+DIYA DSI+LL  SGIDF KN 
Sbjct: 51   MIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFAKNN 110

Query: 825  EKGIDSMRFAELLMSSGIVLNDSIHWVTFHSGYDFGYLLKLLTCRNLPETQAGFFELINM 646
            + GIDS RFAELLMSSGIVLN+++HWVTFHSGYDFGYLLKLLTC+NLPETQ GFFE+I++
Sbjct: 111  QFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISV 170

Query: 645  YFPRVYDIKHLMRFCNSLHGGLNKLAELLEVERVGI 538
            YFPRVYDIKHLM+FCNSLHGGLNKLAELLEVERVGI
Sbjct: 171  YFPRVYDIKHLMKFCNSLHGGLNKLAELLEVERVGI 206


>ref|NP_565735.1| putative CCR4-associated factor 1-7 [Arabidopsis thaliana]
            gi|75337365|sp|Q9SKZ2.2|CAF1G_ARATH RecName:
            Full=Probable CCR4-associated factor 1 homolog 7
            gi|15293025|gb|AAK93623.1| putative CCR4-associated
            factor [Arabidopsis thaliana] gi|20197620|gb|AAD15397.2|
            putative CCR4-associated factor [Arabidopsis thaliana]
            gi|23296713|gb|AAN13153.1| putative CCR4-associated
            factor [Arabidopsis thaliana] gi|330253536|gb|AEC08630.1|
            putative CCR4-associated factor 1-7 [Arabidopsis
            thaliana]
          Length = 275

 Score =  252 bits (643), Expect = 1e-64
 Identities = 120/156 (76%), Positives = 136/156 (87%)
 Frame = -1

Query: 1005 LIQLGLTLSASDGSLPVSPSSGRLLVWQFNFREFDPEADIYAHDSIDLLTSSGIDFQKNC 826
            +IQLGLT S   G+LP   +  +  +WQFNFREFD E+DIYA DSI+LL  SGIDF KN 
Sbjct: 74   MIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNN 133

Query: 825  EKGIDSMRFAELLMSSGIVLNDSIHWVTFHSGYDFGYLLKLLTCRNLPETQAGFFELINM 646
            E GIDS RFAELLMSSGIVLN+++HWVTFHSGYDFGYLLKLLTC+NLPETQ GFFE+I++
Sbjct: 134  EFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISV 193

Query: 645  YFPRVYDIKHLMRFCNSLHGGLNKLAELLEVERVGI 538
            YFPRVYDIKHLM+FCNSLHGGLNKLAELL+VERVGI
Sbjct: 194  YFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGI 229


>ref|XP_002527306.1| ccr4-associated factor, putative [Ricinus communis]
            gi|223533306|gb|EEF35058.1| ccr4-associated factor,
            putative [Ricinus communis]
          Length = 274

 Score =  248 bits (632), Expect = 2e-63
 Identities = 118/156 (75%), Positives = 135/156 (86%)
 Frame = -1

Query: 1005 LIQLGLTLSASDGSLPVSPSSGRLLVWQFNFREFDPEADIYAHDSIDLLTSSGIDFQKNC 826
            LIQLGLT S   G+LP    + +  +WQFNFREF+   D++A+DSI+LL  SGIDF+KN 
Sbjct: 74   LIQLGLTFSDEQGNLPTC-GTDKYCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNN 132

Query: 825  EKGIDSMRFAELLMSSGIVLNDSIHWVTFHSGYDFGYLLKLLTCRNLPETQAGFFELINM 646
            E+GID+MRF ELLMSSGIVLNDS+HWVTFHSGYDFGYLLKLLTC+NLP+TQ GFF LINM
Sbjct: 133  ERGIDAMRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNLPDTQLGFFNLINM 192

Query: 645  YFPRVYDIKHLMRFCNSLHGGLNKLAELLEVERVGI 538
            YFP +YDIKHLM+FCNSLHGGLNKLAELLEVERVGI
Sbjct: 193  YFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGI 228


>ref|XP_003604226.1| Ribonuclease CAF1 [Medicago truncatula] gi|355505281|gb|AES86423.1|
            Ribonuclease CAF1 [Medicago truncatula]
          Length = 277

 Score =  246 bits (628), Expect = 6e-63
 Identities = 115/156 (73%), Positives = 132/156 (84%)
 Frame = -1

Query: 1005 LIQLGLTLSASDGSLPVSPSSGRLLVWQFNFREFDPEADIYAHDSIDLLTSSGIDFQKNC 826
            LIQLGLT S   G+LP      R  +WQFNFREF+   D++A+DSI+LL  SGIDF+KN 
Sbjct: 76   LIQLGLTFSDEHGNLPTCGEDDRFCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNN 135

Query: 825  EKGIDSMRFAELLMSSGIVLNDSIHWVTFHSGYDFGYLLKLLTCRNLPETQAGFFELINM 646
            E GID+ RF ELLMSSGIVLND++HW+TFHSGYDFGYLLKLLTC+NLP+TQ GFF LINM
Sbjct: 136  EDGIDARRFGELLMSSGIVLNDNVHWITFHSGYDFGYLLKLLTCQNLPDTQVGFFNLINM 195

Query: 645  YFPRVYDIKHLMRFCNSLHGGLNKLAELLEVERVGI 538
            YFP +YDIKHLM+FCNSLHGGLNKLAELLEV+RVGI
Sbjct: 196  YFPMLYDIKHLMKFCNSLHGGLNKLAELLEVKRVGI 231


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