BLASTX nr result

ID: Dioscorea21_contig00004869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004869
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like...   211   4e-53
gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]             211   4e-53
emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]   209   1e-52
gb|ABK22320.1| unknown [Picea sitchensis]                             209   2e-52
ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like...   209   2e-52

>ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  211 bits (538), Expect = 4e-53
 Identities = 107/132 (81%), Positives = 112/132 (84%)
 Frame = -2

Query: 397 MSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 218
           MSKLQS+ LREAITQ+VGDAK KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAITQIVGDAKEKKRNFIETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 217 KMKVCMLGDAQHVEEAEKIGLDYMDVEXXXXXXXXXXXXXXXXXKYHAFLASEAIIKQIP 38
           KMK+CMLGDAQHVEEAEKIGL+YMDVE                 KYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 37  RLLGPGLNKAGK 2
           RLLGPGLNKAGK
Sbjct: 121 RLLGPGLNKAGK 132


>gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]
          Length = 216

 Score =  211 bits (538), Expect = 4e-53
 Identities = 108/132 (81%), Positives = 112/132 (84%)
 Frame = -2

Query: 397 MSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 218
           MSKLQSDVLREAI+Q+  D++ KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREAISQITNDSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 217 KMKVCMLGDAQHVEEAEKIGLDYMDVEXXXXXXXXXXXXXXXXXKYHAFLASEAIIKQIP 38
           KMKVCMLGDAQHVEEAEKIGLDYMDVE                 KYHAFLASEAIIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 37  RLLGPGLNKAGK 2
           RLLGPGLNKAGK
Sbjct: 121 RLLGPGLNKAGK 132


>emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]
          Length = 920

 Score =  209 bits (533), Expect = 1e-52
 Identities = 108/143 (75%), Positives = 115/143 (80%)
 Frame = -2

Query: 430  KGHSCLGRDSTMSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFS 251
            +G S  G   + SKLQSD LREAIT +V ++K KKRNFTETIELQIGLKNYDPQKDKRFS
Sbjct: 775  RGASTQGLRISSSKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFS 834

Query: 250  GSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEXXXXXXXXXXXXXXXXXKYHAF 71
            GSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGL+YMDVE                 KYHAF
Sbjct: 835  GSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAF 894

Query: 70   LASEAIIKQIPRLLGPGLNKAGK 2
            LASEA+IKQIPRLLGPGLNKAGK
Sbjct: 895  LASEAVIKQIPRLLGPGLNKAGK 917


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score =  209 bits (532), Expect = 2e-52
 Identities = 107/132 (81%), Positives = 111/132 (84%)
 Frame = -2

Query: 397 MSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 218
           MSKLQSDVLRE ITQV+G++K KKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 217 KMKVCMLGDAQHVEEAEKIGLDYMDVEXXXXXXXXXXXXXXXXXKYHAFLASEAIIKQIP 38
           KMKVCMLGDAQH+EEAEKI LDYMDVE                 KYHAFLASEAIIKQIP
Sbjct: 61  KMKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 37  RLLGPGLNKAGK 2
           RLLGPGLNKAGK
Sbjct: 121 RLLGPGLNKAGK 132


>ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  209 bits (531), Expect = 2e-52
 Identities = 106/132 (80%), Positives = 111/132 (84%)
 Frame = -2

Query: 397 MSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 218
           MSKLQSD LREAIT +V ++K KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 217 KMKVCMLGDAQHVEEAEKIGLDYMDVEXXXXXXXXXXXXXXXXXKYHAFLASEAIIKQIP 38
           KMKVCMLGDAQHVEEAEKIGL+YMDVE                 KYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 37  RLLGPGLNKAGK 2
           RLLGPGLNKAGK
Sbjct: 121 RLLGPGLNKAGK 132


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