BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004854
         (1644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containi...   494   e-137
ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137
ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea ma...   490   e-136
ref|NP_001054053.1| Os04g0643700 [Oryza sativa Japonica Group] g...   489   e-136
ref|XP_003580667.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135

>ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
            mitochondrial-like [Vitis vinifera]
          Length = 571

 Score =  494 bits (1271), Expect = e-137
 Identities = 239/391 (61%), Positives = 299/391 (76%), Gaps = 10/391 (2%)
 Frame = +2

Query: 8    FDQDTVLATLASYSDDWPRAVDFFRWVSSH--FLHTPATHSLLVSILGKHFEFTLAWSHI 181
            FD  TV  TL+ Y++DW RA++FF WV +   F HT  T++ ++ ILGK FEF L W  I
Sbjct: 176  FDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLI 235

Query: 182  ISINPSP----DRSVLRSHFNRLAAAHLVQDALDAFRRSADFGLYDAATFSLLIDALCDH 349
              +   P    +    R  F R AAAHLV++A++A+ R+ +F L D  ++S LIDALC++
Sbjct: 236  QRMKADPVAYPNHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNLRDETSYSNLIDALCEY 295

Query: 350  RHVIEAADL----CKNPPFPIDTKIYNMLLRGWLRMGWWGRCREFWEEMDQKGVAKDLHS 517
            +HVIEA +L     K+  F  D KIYN++LRGW +MGWW +CREFWEEMD++GV K L+S
Sbjct: 296  KHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKSLYS 355

Query: 518  YSIYMDILSKSGKPWKAIKVYKEMRSRNIALDVVAYNTVIQAVGKSEGVDRAITLYKEMI 697
            YSIYMDI  KSGKPW+A+K+YKEM+ + I LDVVAYNTVI+A+G SEGVD +I +++EM 
Sbjct: 356  YSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMK 415

Query: 698  ERGCEPNVVTFNTIIMLLCGDGRINEGYAILEQMRKKGCEPNVITYHCFFRNLNRPKEML 877
            E GCEPNVVT+NTII LLC +GRI E Y + +QMR+KG  PNVITYHCFF  + +PK++L
Sbjct: 416  EVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQIL 475

Query: 878  WLFDRMVKTGCRPRMDTYVMLMNKFGRWGFLRPVLLVWKAMEEHGCSPDAFAYNALIDAL 1057
              FDRM+ +G RPRMDTYVMLM KFGRWGFLRPV +VWK MEE GCSPDA AYNALIDAL
Sbjct: 476  RTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDAL 535

Query: 1058 LQKGMVDMARKYDEEMLAKGLSPKPRKELGT 1150
            +QKGMVD+ARKY+EEMLAKGLS KPR +LGT
Sbjct: 536  VQKGMVDLARKYEEEMLAKGLSAKPRVDLGT 566


>ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|222855957|gb|EEE93504.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  493 bits (1269), Expect = e-137
 Identities = 242/395 (61%), Positives = 299/395 (75%), Gaps = 12/395 (3%)
 Frame = +2

Query: 2    LDFDQDTVLATLASYSDDWPRAVDFFRWVS--SHFLHTPATHSLLVSILGKHFEFTLAWS 175
            L+ D  TV  TL+ Y++DW RA+DFF WV   S F HT  T++ ++ ILGK FEF L+W 
Sbjct: 42   LNLDSSTVFQTLSCYNNDWKRALDFFNWVETESQFQHTTETYNRMIDILGKFFEFDLSWD 101

Query: 176  HIISI--NP--SPDRSVLRSHFNRLAAAHLVQDALDAFR-RSADFGLYDAATFSLLIDAL 340
             I  +  NP  +P+ +  R  F+R  +AHLV +A+  +  R  +FGL D  ++ +L+DAL
Sbjct: 102  LIQRMRNNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYEDRLKEFGLKDETSYCILVDAL 161

Query: 341  CDHRHVIEAADLC---KNPPFPID--TKIYNMLLRGWLRMGWWGRCREFWEEMDQKGVAK 505
            C+++HVIEA +LC    N    +   TKIYNM+LRGW +MGWWG+CREFWEEMD+K V K
Sbjct: 162  CEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKMGWWGKCREFWEEMDRKEVCK 221

Query: 506  DLHSYSIYMDILSKSGKPWKAIKVYKEMRSRNIALDVVAYNTVIQAVGKSEGVDRAITLY 685
            DLHSYSIYMDIL KSGKPWKA+K+YKEM+S+ I LDVVAYNTVI A+G SEGVD  + +Y
Sbjct: 222  DLHSYSIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAYNTVINAIGLSEGVDFVLRVY 281

Query: 686  KEMIERGCEPNVVTFNTIIMLLCGDGRINEGYAILEQMRKKGCEPNVITYHCFFRNLNRP 865
            +EM E GC+PNVVT NT+I LLC +GRI E Y +L++M +    P+V TYHCFFR L +P
Sbjct: 282  REMRELGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMPQSYIAPDVFTYHCFFRCLEKP 341

Query: 866  KEMLWLFDRMVKTGCRPRMDTYVMLMNKFGRWGFLRPVLLVWKAMEEHGCSPDAFAYNAL 1045
            KE+L LFD+M++ G  PRMDTYVMLM KFGRWGFLRPV LVWK ME+ GCSPD FAYNAL
Sbjct: 342  KEILCLFDQMIENGVCPRMDTYVMLMRKFGRWGFLRPVFLVWKKMEKLGCSPDEFAYNAL 401

Query: 1046 IDALLQKGMVDMARKYDEEMLAKGLSPKPRKELGT 1150
            IDAL+QKGMVDMARKYDEEM+AKGLS KPR EL T
Sbjct: 402  IDALIQKGMVDMARKYDEEMMAKGLSAKPRVELNT 436


>ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
            gi|194706478|gb|ACF87323.1| unknown [Zea mays]
            gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein
            ZEAMMB73_571639 [Zea mays]
          Length = 442

 Score =  490 bits (1261), Expect = e-136
 Identities = 240/392 (61%), Positives = 298/392 (76%), Gaps = 12/392 (3%)
 Frame = +2

Query: 11   DQDTVLATLASYSDDWPRAVDFFRWVSS----HFLHTPATHSLLVSILGKHFEFTLAWSH 178
            D   VL TL+ Y++DW RA+DFF W +S    +   T AT +  V ILGKHFEF LA S 
Sbjct: 34   DASAVLKTLSLYANDWRRALDFFHWSASPAGANLPPTAATLARAVDILGKHFEFPLATSL 93

Query: 179  IISINPSPD----RSVLRSHFNRLAAAHLVQDALDAFRRSA-DFGLYDAATFSLLIDALC 343
            ++S +   D    R  LR+  NRLAAA+L+ DAL AF  +A   GL D  +F +L+DALC
Sbjct: 94   LLSHHDPGDPTFLRPALRALLNRLAAANLIDDALHAFESTAASIGLCDEVSFHILVDALC 153

Query: 344  DHRHVIEAADLCKN---PPFPIDTKIYNMLLRGWLRMGWWGRCREFWEEMDQKGVAKDLH 514
            DHR V EA  LC     PPFP  TK +N+LLRGW +   W R R+ W +MD++GVAKDLH
Sbjct: 154  DHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKAHAWARLRQLWFDMDRRGVAKDLH 213

Query: 515  SYSIYMDILSKSGKPWKAIKVYKEMRSRNIALDVVAYNTVIQAVGKSEGVDRAITLYKEM 694
            SYSIYMD L+KSGKPWKA KV+KEM+ R I +D VAYNT I AVG ++GVD A+ LY++M
Sbjct: 214  SYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYRQM 273

Query: 695  IERGCEPNVVTFNTIIMLLCGDGRINEGYAILEQMRKKGCEPNVITYHCFFRNLNRPKEM 874
            ++ GC+PN+ T+N II L C +GR  EGYA ++QMRK GC+P+V+TYHCFF+ L+RP+E+
Sbjct: 274  VDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQYLSRPQEV 333

Query: 875  LWLFDRMVKTGCRPRMDTYVMLMNKFGRWGFLRPVLLVWKAMEEHGCSPDAFAYNALIDA 1054
            L LF++M++ GC+PRMDTYVML+ +FGRWGFLRPV +VWKAMEE G SPDAFAYNALIDA
Sbjct: 334  LGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNALIDA 393

Query: 1055 LLQKGMVDMARKYDEEMLAKGLSPKPRKELGT 1150
            LLQKGMVD+ARKYDE+MLAKGLSPKPRKELGT
Sbjct: 394  LLQKGMVDLARKYDEKMLAKGLSPKPRKELGT 425


>ref|NP_001054053.1| Os04g0643700 [Oryza sativa Japonica Group]
            gi|38344884|emb|CAD41907.2| OSJNBa0033G05.8 [Oryza sativa
            Japonica Group] gi|113565624|dbj|BAF15967.1| Os04g0643700
            [Oryza sativa Japonica Group] gi|125591829|gb|EAZ32179.1|
            hypothetical protein OsJ_16385 [Oryza sativa Japonica
            Group] gi|215701473|dbj|BAG92897.1| unnamed protein
            product [Oryza sativa Japonica Group]
            gi|215704877|dbj|BAG94905.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 442

 Score =  489 bits (1259), Expect = e-136
 Identities = 243/394 (61%), Positives = 300/394 (76%), Gaps = 14/394 (3%)
 Frame = +2

Query: 11   DQDTVLATLASYSDDWPRAVDFFRWVSS----HFLHTPATHSLLVSILGKHFEFTLAWSH 178
            D   VL TL+ Y++DW RA++FF W +S    +   TPAT +  V +LGKHFEF LA S 
Sbjct: 32   DATAVLETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLATSL 91

Query: 179  IIS------INPSPDRSVLRSHFNRLAAAHLVQDALDAFRRSA-DFGLYDAATFSLLIDA 337
            ++S       +PS  R  LRS  NRLAAA+L+ DA+ AF  +A   GL D A+F  L+DA
Sbjct: 92   LVSHHDPGRADPSFLRPALRSLLNRLAAANLIDDAIRAFDSTAGSIGLRDEASFHALVDA 151

Query: 338  LCDHRHVIEAADLCKN---PPFPIDTKIYNMLLRGWLRMGWWGRCREFWEEMDQKGVAKD 508
            LCDHR V EA  LC     PPFP  TK YN+LLRGW +   W R R+ W +MD +GVAKD
Sbjct: 152  LCDHRRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLWFDMDSRGVAKD 211

Query: 509  LHSYSIYMDILSKSGKPWKAIKVYKEMRSRNIALDVVAYNTVIQAVGKSEGVDRAITLYK 688
            LHSYSIYMD L+KSGKPWKA KV+KEM+ + +A+DVVAYNT I +VG ++GVD AI LY+
Sbjct: 212  LHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYR 271

Query: 689  EMIERGCEPNVVTFNTIIMLLCGDGRINEGYAILEQMRKKGCEPNVITYHCFFRNLNRPK 868
            +M++ GC+PN  TFNTI+ LLC +GR  EGYA ++QM K G EPNV+TYHCFF+ L+RP+
Sbjct: 272  QMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFFQYLSRPQ 331

Query: 869  EMLWLFDRMVKTGCRPRMDTYVMLMNKFGRWGFLRPVLLVWKAMEEHGCSPDAFAYNALI 1048
            E+L LF++M++ GCRPRMDTYVML+ +FGRWGFLRPV +VWKAME+ G SPDAFAYN+LI
Sbjct: 332  EVLGLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEKQGLSPDAFAYNSLI 391

Query: 1049 DALLQKGMVDMARKYDEEMLAKGLSPKPRKELGT 1150
            DALLQKGMVD+ARKYDEEML+KGLSPKPRKELGT
Sbjct: 392  DALLQKGMVDLARKYDEEMLSKGLSPKPRKELGT 425


>ref|XP_003580667.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
            mitochondrial-like [Brachypodium distachyon]
          Length = 441

 Score =  488 bits (1257), Expect = e-135
 Identities = 240/392 (61%), Positives = 296/392 (75%), Gaps = 12/392 (3%)
 Frame = +2

Query: 11   DQDTVLATLASYSDDWPRAVDFFRWVSS----HFLHTPATHSLLVSILGKHFEFTLAWSH 178
            D   VL TL+ Y++DW RA+DFF W +S    +   T AT S  + ILGKHFEF LA S 
Sbjct: 33   DAAAVLETLSLYTNDWRRALDFFHWSASPAGANLPPTAATLSRAIDILGKHFEFPLATSL 92

Query: 179  IISINPSPD----RSVLRSHFNRLAAAHLVQDALDAFRRSA-DFGLYDAATFSLLIDALC 343
            ++S +   D    R  LR+  NRLAAA+LV DA+  F  +A   GL D A+F LLIDALC
Sbjct: 93   LLSHHDPSDPAFLRPALRALLNRLAAANLVDDAVRVFESTAGSIGLRDEASFHLLIDALC 152

Query: 344  DHRHVIEAADLCKN---PPFPIDTKIYNMLLRGWLRMGWWGRCREFWEEMDQKGVAKDLH 514
            DHR V EA  LC     PPFP  TK +N+LLRGW +   W R R+ W +MD +GVAKDLH
Sbjct: 153  DHRRVDEAHHLCFGKAPPPFPPGTKTHNLLLRGWAKTRAWTRLRQHWFDMDNRGVAKDLH 212

Query: 515  SYSIYMDILSKSGKPWKAIKVYKEMRSRNIALDVVAYNTVIQAVGKSEGVDRAITLYKEM 694
            SYSIYMD L+KSGKPWKA+KV+KEM+ + + +D+VAYNT I A+G ++GVD ++ LY++M
Sbjct: 213  SYSIYMDALAKSGKPWKAVKVFKEMKQKRLPVDIVAYNTAIHAIGLAQGVDFSVRLYRQM 272

Query: 695  IERGCEPNVVTFNTIIMLLCGDGRINEGYAILEQMRKKGCEPNVITYHCFFRNLNRPKEM 874
            ++ GC+PN  TFNTI+ LLC +GR  EGYA ++QM K GCEPNV+TYHCFF+ L+RP+E+
Sbjct: 273  VDAGCKPNTATFNTIVKLLCKEGRFREGYAFVQQMHKAGCEPNVLTYHCFFQYLSRPQEV 332

Query: 875  LWLFDRMVKTGCRPRMDTYVMLMNKFGRWGFLRPVLLVWKAMEEHGCSPDAFAYNALIDA 1054
            L LF++M++ GCRPRMDTYVML+ +FGRWGFLRPV  VWK MEE G SPDAFAYN LIDA
Sbjct: 333  LVLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLSPDAFAYNTLIDA 392

Query: 1055 LLQKGMVDMARKYDEEMLAKGLSPKPRKELGT 1150
            LL+KGMVD+ARKYDEEMLAKGLSPKPRKELGT
Sbjct: 393  LLEKGMVDLARKYDEEMLAKGLSPKPRKELGT 424