BLASTX nr result

ID: Dioscorea21_contig00004821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004821
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27775.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis...   140   1e-31
ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis...   140   1e-31
ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa...   137   1e-30
gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indi...   135   3e-30

>emb|CBI27775.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = -1

Query: 247 SLYHHPALLAAHPQIEPMPSGNVPPGFDTATCRSVYVGNVHNHVTEALLQEVFQSTGPVE 68
           SLYHHP LLA  PQIEP+ SGN+PPGFD++TCRSVYVGN+H  VTE LLQEVF STGP+E
Sbjct: 23  SLYHHPGLLAP-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLE 81

Query: 67  GCKLIRKEKSSYGFVDYYDRR 5
           GCKLIRKEKSSYGFVDY+DRR
Sbjct: 82  GCKLIRKEKSSYGFVDYFDRR 102


>ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
          Length = 429

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = -1

Query: 247 SLYHHPALLAAHPQIEPMPSGNVPPGFDTATCRSVYVGNVHNHVTEALLQEVFQSTGPVE 68
           SLYHHP LLA  PQIEP+ SGN+PPGFD++TCRSVYVGN+H  VTE LLQEVF STGP+E
Sbjct: 23  SLYHHPGLLAP-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLE 81

Query: 67  GCKLIRKEKSSYGFVDYYDRR 5
           GCKLIRKEKSSYGFVDY+DRR
Sbjct: 82  GCKLIRKEKSSYGFVDYFDRR 102


>ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
          Length = 426

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = -1

Query: 247 SLYHHPALLAAHPQIEPMPSGNVPPGFDTATCRSVYVGNVHNHVTEALLQEVFQSTGPVE 68
           SLYHHP LLA  PQIEP+ SGN+PPGFD++TCRSVYVGN+H  VTE LLQEVF STGP+E
Sbjct: 23  SLYHHPGLLAP-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLE 81

Query: 67  GCKLIRKEKSSYGFVDYYDRR 5
           GCKLIRKEKSSYGFVDY+DRR
Sbjct: 82  GCKLIRKEKSSYGFVDYFDRR 102


>ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
          Length = 420

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = -1

Query: 247 SLYHHPALLAAHPQIEPMPSGNVPPGFDTATCRSVYVGNVHNHVTEALLQEVFQSTGPVE 68
           SLY HP LLAA PQIEP+ SGN+PPGFD++TCRSVYVGN+H  VTE LLQEVF S GP+E
Sbjct: 15  SLYPHPGLLAA-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSIGPIE 73

Query: 67  GCKLIRKEKSSYGFVDYYDRR 5
           GCKLIRKEKSSYGFVDY+DRR
Sbjct: 74  GCKLIRKEKSSYGFVDYFDRR 94


>gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
          Length = 427

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/81 (81%), Positives = 72/81 (88%), Gaps = 2/81 (2%)
 Frame = -1

Query: 241 YHHPALLAAHPQ--IEPMPSGNVPPGFDTATCRSVYVGNVHNHVTEALLQEVFQSTGPVE 68
           +HHP L AA PQ  IEP+ +GN+PPGFDT+TCRSVYVGNVH  VTEALL+EVFQSTG VE
Sbjct: 33  HHHPLLAAAPPQQQIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVE 92

Query: 67  GCKLIRKEKSSYGFVDYYDRR 5
           GCKLIRKEKSSYGFVDYYDRR
Sbjct: 93  GCKLIRKEKSSYGFVDYYDRR 113


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