BLASTX nr result

ID: Dioscorea21_contig00004815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004815
         (1191 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis ...   413   e-113
ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111
ref|XP_003632130.1| PREDICTED: mitoferrin-like [Vitis vinifera] ...   406   e-111
gb|ACF87311.1| unknown [Zea mays] gi|414866343|tpg|DAA44900.1| T...   403   e-110
ref|XP_003558129.1| PREDICTED: mitoferrin-like [Brachypodium dis...   403   e-110

>ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis vinifera]
          Length = 327

 Score =  413 bits (1061), Expect = e-113
 Identities = 209/296 (70%), Positives = 231/296 (78%), Gaps = 2/296 (0%)
 Frame = -1

Query: 1137 SHDGLLFWQYMIAGSIAGLVEHTAMFPVDTLKTRMQA--GSLPCHPPLGLRHALASVLRH 964
            SHDGL FWQ+MIAGSIAG VEH AMFPVDTLKTRMQ   GS P  P +GLR  L S+L+ 
Sbjct: 30   SHDGLEFWQFMIAGSIAGSVEHMAMFPVDTLKTRMQVIGGSYPA-PSIGLRQVLGSILKM 88

Query: 963  EGILGLYRGIGAMGLGAGPAHAVYFSVYEFAKQALSKNNPNNPFAHAASGVLATVASDAV 784
            EG  GLYRGI AMGLGAGP+HAVYFSVYE  K   S  NPNN  AHA SGV ATVASDAV
Sbjct: 89   EGPAGLYRGIAAMGLGAGPSHAVYFSVYELCKDFFSAGNPNNSAAHAVSGVFATVASDAV 148

Query: 783  LTPMDTVKQRLQLESSPYRGVGDCVRRVMREEGVRAFYASYRTTVVMNAPFTAVHFATYE 604
            +TPMD VKQRLQL+SSPY+GV DCV+RV+ EEG++AFYASYRTTVVMNAPFTAVHFATYE
Sbjct: 149  ITPMDMVKQRLQLKSSPYKGVMDCVKRVLMEEGIQAFYASYRTTVVMNAPFTAVHFATYE 208

Query: 603  AVKKALMEVSPDSASDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTQLQCQGVCGCDRFSS 424
            A K+ LMEVSP++A DE                    TPLDVVKTQLQCQGVCGCDRFSS
Sbjct: 209  AAKRGLMEVSPENADDENLVVHATAGAVAGALAAAVTTPLDVVKTQLQCQGVCGCDRFSS 268

Query: 423  SSIWDLIRTIRRRDGYTGLMRGWKPRMLFHAPAAAICWSTYEASKSFFQRLNNTKN 256
             SI D++ TI ++DGY GLMRGW PRMLFHAPAAAICWSTYEA+K+FF+  N   N
Sbjct: 269  GSIRDVLETIVKKDGYGGLMRGWIPRMLFHAPAAAICWSTYEAAKAFFEEQNGRSN 324


>ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|222867653|gb|EEF04784.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  406 bits (1044), Expect = e-111
 Identities = 209/312 (66%), Positives = 236/312 (75%), Gaps = 4/312 (1%)
 Frame = -1

Query: 1191 HPELLPAATAASSEDLQLSHDGLLFWQYMIAGSIAGLVEHTAMFPVDTLKTRMQA----G 1024
            HPE+   + + +       HDGL FWQ+M+AGSIAG +EH AMFPVDTLKTRMQA    G
Sbjct: 20   HPEMPELSVSENP------HDGLHFWQFMVAGSIAGSIEHMAMFPVDTLKTRMQAIVGSG 73

Query: 1023 SLPCHPPLGLRHALASVLRHEGILGLYRGIGAMGLGAGPAHAVYFSVYEFAKQALSKNNP 844
            S P    + +R A  S++++EG  G YRGIGAMGLGAGPAHAVYFSVYE  KQ  S+ +P
Sbjct: 74   SYPVQN-VNVRQACKSIMKNEGAAGFYRGIGAMGLGAGPAHAVYFSVYELCKQYFSRGDP 132

Query: 843  NNPFAHAASGVLATVASDAVLTPMDTVKQRLQLESSPYRGVGDCVRRVMREEGVRAFYAS 664
            NN  AHA SGV ATVASDAV TPMD VKQRLQL+SSPY+GV DCVRRV+ EEG+ AFYAS
Sbjct: 133  NNSVAHAVSGVCATVASDAVFTPMDVVKQRLQLKSSPYKGVVDCVRRVLVEEGIGAFYAS 192

Query: 663  YRTTVVMNAPFTAVHFATYEAVKKALMEVSPDSASDEXXXXXXXXXXXXXXXXXXXXTPL 484
            Y+TTVVMNAPFTAVHFATYEA K+ L+EVSPD A DE                    TPL
Sbjct: 193  YKTTVVMNAPFTAVHFATYEAAKRGLIEVSPDIADDERLVVHATAGAAAGALAAIVTTPL 252

Query: 483  DVVKTQLQCQGVCGCDRFSSSSIWDLIRTIRRRDGYTGLMRGWKPRMLFHAPAAAICWST 304
            DVVKTQLQCQGVCGCDRFSSSSI ++I+ I ++DGY GLMRGW PRMLFHAPAAAICWST
Sbjct: 253  DVVKTQLQCQGVCGCDRFSSSSIGNVIKIIVKKDGYQGLMRGWIPRMLFHAPAAAICWST 312

Query: 303  YEASKSFFQRLN 268
            YEASK FF RLN
Sbjct: 313  YEASKDFFHRLN 324


>ref|XP_003632130.1| PREDICTED: mitoferrin-like [Vitis vinifera]
            gi|297745824|emb|CBI15880.3| unnamed protein product
            [Vitis vinifera]
          Length = 327

 Score =  406 bits (1044), Expect = e-111
 Identities = 210/309 (67%), Positives = 233/309 (75%), Gaps = 1/309 (0%)
 Frame = -1

Query: 1191 HPELLPAATAASSEDLQLSHDGLLFWQYMIAGSIAGLVEHTAMFPVDTLKTRMQAGSLPC 1012
            HPE+  +A           HDGL FWQ+M+AGSIAG VEH AMFPVDT+KTRMQ    PC
Sbjct: 22   HPEITMSA-----------HDGLHFWQFMVAGSIAGCVEHMAMFPVDTIKTRMQVLG-PC 69

Query: 1011 H-PPLGLRHALASVLRHEGILGLYRGIGAMGLGAGPAHAVYFSVYEFAKQALSKNNPNNP 835
                + L HAL S+L+ EG  GLYRGIGAMGLGAGPAHAVYFS+YE  K++LS  NPNN 
Sbjct: 70   PIKSVSLSHALRSILKTEGPSGLYRGIGAMGLGAGPAHAVYFSIYEIFKKSLSGGNPNNS 129

Query: 834  FAHAASGVLATVASDAVLTPMDTVKQRLQLESSPYRGVGDCVRRVMREEGVRAFYASYRT 655
             AHA SGV ATVASDAV TPMD VKQRLQL SSPY+GV DCV RV+REEG +AFYASYRT
Sbjct: 130  AAHAISGVFATVASDAVFTPMDMVKQRLQLSSSPYKGVLDCVTRVLREEGFKAFYASYRT 189

Query: 654  TVVMNAPFTAVHFATYEAVKKALMEVSPDSASDEXXXXXXXXXXXXXXXXXXXXTPLDVV 475
            TV+MNAPFTAVHF+TYEA K+ LMEVSPDSA D                     TPLDVV
Sbjct: 190  TVLMNAPFTAVHFSTYEAAKRGLMEVSPDSADDNRVVVHATAGAAAGALAALLTTPLDVV 249

Query: 474  KTQLQCQGVCGCDRFSSSSIWDLIRTIRRRDGYTGLMRGWKPRMLFHAPAAAICWSTYEA 295
            KTQLQCQG+CGCDR+SS SI D++RTI ++DGY GLMRGW PRMLFHAPAAAICWSTYEA
Sbjct: 250  KTQLQCQGICGCDRYSSGSIRDVLRTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEA 309

Query: 294  SKSFFQRLN 268
             KS FQ LN
Sbjct: 310  WKSIFQELN 318



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
 Frame = -1

Query: 1110 YMIAGSIAGLVEHTAMFPVDTLKTRMQAGSLPCHPPLGLRHALASVLRHEGILGLYRGIG 931
            + I+G  A +       P+D +K R+Q  S P     G+   +  VLR EG    Y    
Sbjct: 132  HAISGVFATVASDAVFTPMDMVKQRLQLSSSPYK---GVLDCVTRVLREEGFKAFYASYR 188

Query: 930  AMGLGAGPAHAVYFSVYEFAKQALSKNNP-----NNPFAHAASGVLATVASDAVLTPMDT 766
               L   P  AV+FS YE AK+ L + +P     N    HA +G  A   +  + TP+D 
Sbjct: 189  TTVLMNAPFTAVHFSTYEAAKRGLMEVSPDSADDNRVVVHATAGAAAGALAALLTTPLDV 248

Query: 765  VKQRLQLESS------PYRGVGDCVRRVMREEGVRAFYASYRTTVVMNAPFTAVHFATYE 604
            VK +LQ +            + D +R +++++G R     +   ++ +AP  A+ ++TYE
Sbjct: 249  VKTQLQCQGICGCDRYSSGSIRDVLRTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYE 308

Query: 603  AVKKALMEVSPDSASD 556
            A K    E++  S SD
Sbjct: 309  AWKSIFQELNAKSDSD 324


>gb|ACF87311.1| unknown [Zea mays] gi|414866343|tpg|DAA44900.1| TPA: RNA-splicing
            protein MRS3 [Zea mays]
          Length = 333

 Score =  403 bits (1036), Expect = e-110
 Identities = 206/295 (69%), Positives = 231/295 (78%), Gaps = 2/295 (0%)
 Frame = -1

Query: 1137 SHDGLLFWQYMIAGSIAGLVEHTAMFPVDTLKTRMQAGSLPCHPPLGLRHALASVLRHEG 958
            +HDGL FWQYM+AGS+AG+VEHTAMFPVDTLKT MQA + PC P L LR AL + +  EG
Sbjct: 40   THDGLRFWQYMLAGSVAGVVEHTAMFPVDTLKTHMQASTPPCRPTLSLRAALRNAVAGEG 99

Query: 957  -ILGLYRGIGAMGLGAGPAHAVYFSVYEFAKQALSKN-NPNNPFAHAASGVLATVASDAV 784
              L LYRG+ AM  GAGPAHAVYFSVYEFAK AL+    PNNP AHAASGV+ATVASDAV
Sbjct: 100  GALALYRGLPAMAFGAGPAHAVYFSVYEFAKSALTDRLGPNNPAAHAASGVVATVASDAV 159

Query: 783  LTPMDTVKQRLQLESSPYRGVGDCVRRVMREEGVRAFYASYRTTVVMNAPFTAVHFATYE 604
            LTPMDTVKQRLQL SSPY GVG C+R V+R+EG  AF+ SYRTTVVMNAP+TAVHFATYE
Sbjct: 160  LTPMDTVKQRLQLTSSPYTGVGHCIRTVLRDEGPSAFFVSYRTTVVMNAPYTAVHFATYE 219

Query: 603  AVKKALMEVSPDSASDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTQLQCQGVCGCDRFSS 424
            A K+ L ++   +A +E                    TPLDVVKTQLQCQGVCGC+RFSS
Sbjct: 220  AAKRMLGDM---AAEEESLAVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCERFSS 276

Query: 423  SSIWDLIRTIRRRDGYTGLMRGWKPRMLFHAPAAAICWSTYEASKSFFQRLNNTK 259
            SSI D+ RTI +RDGY+GLMRGWKPRMLFHAPAAAICWSTYEASKSFFQR N  +
Sbjct: 277  SSIGDVFRTIIKRDGYSGLMRGWKPRMLFHAPAAAICWSTYEASKSFFQRFNEER 331


>ref|XP_003558129.1| PREDICTED: mitoferrin-like [Brachypodium distachyon]
          Length = 391

 Score =  403 bits (1035), Expect = e-110
 Identities = 212/322 (65%), Positives = 237/322 (73%), Gaps = 14/322 (4%)
 Frame = -1

Query: 1182 LLPAATAASSED------------LQLSHDGLLFWQYMIAGSIAGLVEHTAMFPVDTLKT 1039
            LLPAA    S+D               +HDGL FWQYM+AGS+AGLVEHTAMFPVDTLKT
Sbjct: 71   LLPAAAEEPSQDPPKPVLSVAGPAAAATHDGLRFWQYMLAGSVAGLVEHTAMFPVDTLKT 130

Query: 1038 RMQAGSLPCHPPLGLRHALASVLRHEG-ILGLYRGIGAMGLGAGPAHAVYFSVYEFAKQA 862
             MQAG+ PC P L L  AL + +  EG  L LYRG+ AM LGAGPAHAVYFSVYEFAK  
Sbjct: 131  HMQAGAPPCRPTLSLGAALRAAVSGEGGALALYRGLPAMALGAGPAHAVYFSVYEFAKSR 190

Query: 861  LSKN-NPNNPFAHAASGVLATVASDAVLTPMDTVKQRLQLESSPYRGVGDCVRRVMREEG 685
            LS    PNNP AHA+SGVLATVASDAV TPMDTVKQRLQL SSPY GV  CVR V R+EG
Sbjct: 191  LSDRLGPNNPVAHASSGVLATVASDAVFTPMDTVKQRLQLTSSPYTGVSHCVRTVFRDEG 250

Query: 684  VRAFYASYRTTVVMNAPFTAVHFATYEAVKKALMEVSPDSASDEXXXXXXXXXXXXXXXX 505
            +RAF+ SYRTTV+MNAP+TAVHF+TYEA K+ L +++ D   +E                
Sbjct: 251  LRAFFVSYRTTVLMNAPYTAVHFSTYEAAKRMLGDLAAD---EESLAVHATAGAAAGALA 307

Query: 504  XXXXTPLDVVKTQLQCQGVCGCDRFSSSSIWDLIRTIRRRDGYTGLMRGWKPRMLFHAPA 325
                TPLDVVKTQLQCQGVCGC+RFSSSSI D+ RTI +RDGY GLMRGWKPRMLFHAPA
Sbjct: 308  AAITTPLDVVKTQLQCQGVCGCERFSSSSIGDVFRTIIKRDGYIGLMRGWKPRMLFHAPA 367

Query: 324  AAICWSTYEASKSFFQRLNNTK 259
            AAICWSTYEASKSFF+R N  +
Sbjct: 368  AAICWSTYEASKSFFERFNEKR 389


Top