BLASTX nr result

ID: Dioscorea21_contig00004792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004792
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32011.3| unnamed protein product [Vitis vinifera]              403   e-110
ref|XP_002270296.1| PREDICTED: uncharacterized protein LOC100258...   403   e-110
ref|XP_002871929.1| zinc knuckle (CCHC-type) family protein [Ara...   370   e-100
gb|AAM62689.1| zinc finger protein [Arabidopsis thaliana]             370   e-100
ref|NP_568393.1| CCHC-type zinc knuckle protein [Arabidopsis tha...   369   e-100

>emb|CBI32011.3| unnamed protein product [Vitis vinifera]
          Length = 377

 Score =  403 bits (1036), Expect = e-110
 Identities = 201/321 (62%), Positives = 225/321 (70%), Gaps = 2/321 (0%)
 Frame = +1

Query: 1   KLRSWFGPNGQYIRELPCPSCRGRGYTPCAVCGIERSRLDCPQCNGKGIQTCRQCSGDCV 180
           K+RSWFGPNGQYIRELPCPSCRGRGYTPC  CGIERSRLDC QCNGKG+QTCR+C GDCV
Sbjct: 70  KIRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRLDCSQCNGKGMQTCRKCFGDCV 129

Query: 181 IWEESIDEQPWEKARSSSPXXXXXXXXXXXXXXXXNTLRKSKRKYQSPSPEVSLKISRSL 360
           IWEESIDE+PWEKARS SP                +  RKSKR YQSPSPEV LKISRSL
Sbjct: 130 IWEESIDERPWEKARSVSPLKVKEDDEVDNLDIKLDVRRKSKRVYQSPSPEVGLKISRSL 189

Query: 361 RSLNEKTGLFSKRMKIIHRDPKLRAQRVXXXXXXXXXXXXXXXXSETMKAFFRNPENRHK 540
           +SLN KTGLFSKRMKIIHRDPKL AQRV                SE +KAFFR+PENR K
Sbjct: 190 KSLNAKTGLFSKRMKIIHRDPKLHAQRVAAIKKAKGTAAARKRASEALKAFFRDPENRRK 249

Query: 541 RSIAMKGVKFYCRHCGQEGHRTHYCPTLRKTSGNVRFKCRICGERGHNRRTCGRSKSKLG 720
           RSIAMKG KFYC++CG+EGHR HYCP L  +S + RF+CR+CGE+GHNRRTC RS     
Sbjct: 250 RSIAMKGAKFYCKNCGREGHRRHYCPELANSSVDRRFRCRLCGEKGHNRRTCRRS----- 304

Query: 721 REDDMRKNTS-FRQCKACGEGGHDRRNCPTLT-LKVEKFILNPLKKSTLPNYNHDDNNKR 894
           RE   R   S    C+ CG  GH+RR CP  T LK++    N  + S +       +  R
Sbjct: 305 RESGTRSTVSRHHHCRICGHSGHNRRTCPQGTGLKLDAGGTN--RGSLI-------SGSR 355

Query: 895 TYLCRLCQEKGHNIRTCPKKD 957
            Y CRLC EKGHNIRTCP K+
Sbjct: 356 IYACRLCLEKGHNIRTCPSKN 376


>ref|XP_002270296.1| PREDICTED: uncharacterized protein LOC100258796 [Vitis vinifera]
          Length = 387

 Score =  403 bits (1036), Expect = e-110
 Identities = 201/321 (62%), Positives = 225/321 (70%), Gaps = 2/321 (0%)
 Frame = +1

Query: 1    KLRSWFGPNGQYIRELPCPSCRGRGYTPCAVCGIERSRLDCPQCNGKGIQTCRQCSGDCV 180
            K+RSWFGPNGQYIRELPCPSCRGRGYTPC  CGIERSRLDC QCNGKG+QTCR+C GDCV
Sbjct: 80   KIRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRLDCSQCNGKGMQTCRKCFGDCV 139

Query: 181  IWEESIDEQPWEKARSSSPXXXXXXXXXXXXXXXXNTLRKSKRKYQSPSPEVSLKISRSL 360
            IWEESIDE+PWEKARS SP                +  RKSKR YQSPSPEV LKISRSL
Sbjct: 140  IWEESIDERPWEKARSVSPLKVKEDDEVDNLDIKLDVRRKSKRVYQSPSPEVGLKISRSL 199

Query: 361  RSLNEKTGLFSKRMKIIHRDPKLRAQRVXXXXXXXXXXXXXXXXSETMKAFFRNPENRHK 540
            +SLN KTGLFSKRMKIIHRDPKL AQRV                SE +KAFFR+PENR K
Sbjct: 200  KSLNAKTGLFSKRMKIIHRDPKLHAQRVAAIKKAKGTAAARKRASEALKAFFRDPENRRK 259

Query: 541  RSIAMKGVKFYCRHCGQEGHRTHYCPTLRKTSGNVRFKCRICGERGHNRRTCGRSKSKLG 720
            RSIAMKG KFYC++CG+EGHR HYCP L  +S + RF+CR+CGE+GHNRRTC RS     
Sbjct: 260  RSIAMKGAKFYCKNCGREGHRRHYCPELANSSVDRRFRCRLCGEKGHNRRTCRRS----- 314

Query: 721  REDDMRKNTS-FRQCKACGEGGHDRRNCPTLT-LKVEKFILNPLKKSTLPNYNHDDNNKR 894
            RE   R   S    C+ CG  GH+RR CP  T LK++    N  + S +       +  R
Sbjct: 315  RESGTRSTVSRHHHCRICGHSGHNRRTCPQGTGLKLDAGGTN--RGSLI-------SGSR 365

Query: 895  TYLCRLCQEKGHNIRTCPKKD 957
             Y CRLC EKGHNIRTCP K+
Sbjct: 366  IYACRLCLEKGHNIRTCPSKN 386


>ref|XP_002871929.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317766|gb|EFH48188.1| zinc knuckle
           (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 404

 Score =  370 bits (949), Expect = e-100
 Identities = 183/316 (57%), Positives = 212/316 (67%)
 Frame = +1

Query: 7   RSWFGPNGQYIRELPCPSCRGRGYTPCAVCGIERSRLDCPQCNGKGIQTCRQCSGDCVIW 186
           RSWFGPNGQYIRELPCP+CRGRGYT C+ CGIERSRLDCPQC GKGI TC +C GDCVIW
Sbjct: 88  RSWFGPNGQYIRELPCPTCRGRGYTSCSNCGIERSRLDCPQCKGKGIMTCLRCLGDCVIW 147

Query: 187 EESIDEQPWEKARSSSPXXXXXXXXXXXXXXXXNTLRKSKRKYQSPSPEVSLKISRSLRS 366
           EESIDE+PWEKARSSSP                +  RKSKR YQSP+PEV  KISRSL+S
Sbjct: 148 EESIDERPWEKARSSSPFRVKEDDEVDNLEIKFSKRRKSKRIYQSPTPEVGQKISRSLKS 207

Query: 367 LNEKTGLFSKRMKIIHRDPKLRAQRVXXXXXXXXXXXXXXXXSETMKAFFRNPENRHKRS 546
           LN KTGLFSKRMKIIHRDP L AQRV                SE+MKAFF +P+NR +RS
Sbjct: 208 LNAKTGLFSKRMKIIHRDPVLHAQRVAAIKKAKGTPAARKHASESMKAFFSDPDNREQRS 267

Query: 547 IAMKGVKFYCRHCGQEGHRTHYCPTLRKTSGNVRFKCRICGERGHNRRTCGRSKSKLGRE 726
           ++MKGVKFYC++CGQEGHR HYCP L  T+ + RF+CR CG +GHNRRTC +SKS + + 
Sbjct: 268 LSMKGVKFYCKNCGQEGHRRHYCPEL-GTNADRRFRCRGCGGKGHNRRTCPKSKSMVTK- 325

Query: 727 DDMRKNTSFRQCKACGEGGHDRRNCPTLTLKVEKFILNPLKKSTLPNYNHDDNNKRTYLC 906
                +T   QC  CGE GH+ R C   T                 + + D   +R Y C
Sbjct: 326 ---GISTRHHQCGICGESGHNSRTCLKPT--------GVRPSGPGGDSSGDGVGRRRYAC 374

Query: 907 RLCQEKGHNIRTCPKK 954
           R C + GHN+RTCP K
Sbjct: 375 RFCNKMGHNVRTCPSK 390


>gb|AAM62689.1| zinc finger protein [Arabidopsis thaliana]
          Length = 393

 Score =  370 bits (949), Expect = e-100
 Identities = 184/316 (58%), Positives = 214/316 (67%)
 Frame = +1

Query: 7   RSWFGPNGQYIRELPCPSCRGRGYTPCAVCGIERSRLDCPQCNGKGIQTCRQCSGDCVIW 186
           RSWFGPNGQYIRELPCP+CRGRGYT C+ CGIERSRLDCPQC GKGI TC +C GDCVIW
Sbjct: 77  RSWFGPNGQYIRELPCPTCRGRGYTSCSNCGIERSRLDCPQCKGKGIMTCLRCLGDCVIW 136

Query: 187 EESIDEQPWEKARSSSPXXXXXXXXXXXXXXXXNTLRKSKRKYQSPSPEVSLKISRSLRS 366
           EESIDE+PWEKARSSSP                +  RKSKR YQSP+PEV  KISRSL+S
Sbjct: 137 EESIDERPWEKARSSSPFRVKEDDEVDNLEIKFSKRRKSKRIYQSPTPEVGQKISRSLKS 196

Query: 367 LNEKTGLFSKRMKIIHRDPKLRAQRVXXXXXXXXXXXXXXXXSETMKAFFRNPENRHKRS 546
           LN KTGLFSKRMKIIHRDP L AQRV                SE+MKAFF NP NR +RS
Sbjct: 197 LNAKTGLFSKRMKIIHRDPVLHAQRVAAIKKAKGTPAARKHASESMKAFFSNPVNREQRS 256

Query: 547 IAMKGVKFYCRHCGQEGHRTHYCPTLRKTSGNVRFKCRICGERGHNRRTCGRSKSKLGRE 726
           ++MKG KFYC++CGQEGHR HYCP L  T+ + +F+CR CG +GHNRRTC +SKS + + 
Sbjct: 257 LSMKGTKFYCKNCGQEGHRRHYCPEL-GTNADRKFRCRGCGGKGHNRRTCPKSKSIVTKS 315

Query: 727 DDMRKNTSFRQCKACGEGGHDRRNCPTLTLKVEKFILNPLKKSTLPNYNHDDNNKRTYLC 906
                +T + +C  CGE GH+ R C   T       +NP    +  N   D   K TY C
Sbjct: 316 ----ISTRYHKCGICGERGHNSRTCRKPT------GVNP--SCSGENSGEDGVGKITYAC 363

Query: 907 RLCQEKGHNIRTCPKK 954
             C++ GHN+RTCP K
Sbjct: 364 GFCKKMGHNVRTCPSK 379


>ref|NP_568393.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
           gi|145334525|ref|NP_001078608.1| CCHC-type zinc knuckle
           protein [Arabidopsis thaliana]
           gi|332005431|gb|AED92814.1| CCHC-type zinc knuckle
           protein [Arabidopsis thaliana]
           gi|332005432|gb|AED92815.1| CCHC-type zinc knuckle
           protein [Arabidopsis thaliana]
          Length = 393

 Score =  369 bits (947), Expect = e-100
 Identities = 184/316 (58%), Positives = 214/316 (67%)
 Frame = +1

Query: 7   RSWFGPNGQYIRELPCPSCRGRGYTPCAVCGIERSRLDCPQCNGKGIQTCRQCSGDCVIW 186
           RSWFGPNGQYIRELPCP+CRGRGYT C+ CGIERSRLDCPQC GKGI TC +C GDCVIW
Sbjct: 77  RSWFGPNGQYIRELPCPTCRGRGYTSCSNCGIERSRLDCPQCKGKGIMTCLRCLGDCVIW 136

Query: 187 EESIDEQPWEKARSSSPXXXXXXXXXXXXXXXXNTLRKSKRKYQSPSPEVSLKISRSLRS 366
           EESIDE+PWEKARSSSP                +  RKSKR YQSP+PEV  KISRSL+S
Sbjct: 137 EESIDERPWEKARSSSPFRVKEDDEVDNLEIKFSKRRKSKRIYQSPTPEVGQKISRSLKS 196

Query: 367 LNEKTGLFSKRMKIIHRDPKLRAQRVXXXXXXXXXXXXXXXXSETMKAFFRNPENRHKRS 546
           LN KTGLFSKRMKIIHRDP L AQRV                SE+MKAFF NP NR +RS
Sbjct: 197 LNAKTGLFSKRMKIIHRDPVLHAQRVAAIKKAKGTPAARKHASESMKAFFSNPVNREQRS 256

Query: 547 IAMKGVKFYCRHCGQEGHRTHYCPTLRKTSGNVRFKCRICGERGHNRRTCGRSKSKLGRE 726
           ++MKG KFYC++CGQEGHR HYCP L  T+ + +F+CR CG +GHNRRTC +SKS + + 
Sbjct: 257 LSMKGTKFYCKNCGQEGHRRHYCPEL-GTNADRKFRCRGCGGKGHNRRTCPKSKSIVTK- 314

Query: 727 DDMRKNTSFRQCKACGEGGHDRRNCPTLTLKVEKFILNPLKKSTLPNYNHDDNNKRTYLC 906
                +T + +C  CGE GH+ R C   T       +NP    +  N   D   K TY C
Sbjct: 315 ---GISTRYHKCGICGERGHNSRTCRKPT------GVNP--SCSGENSGEDGVGKITYAC 363

Query: 907 RLCQEKGHNIRTCPKK 954
             C++ GHN+RTCP K
Sbjct: 364 GFCKKMGHNVRTCPSK 379


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